RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 AAMPQ13685 434 aa10.38□□□□□ -0.75
GPC3-203ENST00000406757 RABL6Q3YEC7 729 aaPredicted RBP10.38□□□□□ -0.75
GPC3-203ENST00000406757 MAMSTRQ6ZN01 415 aa10.38□□□□□ -0.75
GPC3-203ENST00000406757 NLRP3Q96P20 1036 aa10.38□□□□□ -0.75
GPC3-203ENST00000406757 SIL1Q9H173 461 aa10.38□□□□□ -0.75
GPC3-203ENST00000406757 HDAC5Q9UQL6 1122 aa10.38□□□□□ -0.75
GPC3-203ENST00000406757 EXOC6BQ9Y2D4 811 aa10.38□□□□□ -0.75
GPC3-203ENST00000406757 DDX60Q8IY21 1712 aaKnown RBP10.38□□□□□ -0.75
GPC3-203ENST00000406757 IBTKQ9P2D0 1353 aaPredicted RBP10.38□□□□□ -0.75
GPC3-203ENST00000406757 SCN4AP35499 1836 aa10.37□□□□□ -0.75
GPC3-203ENST00000406757 FZD9O00144 591 aa10.37□□□□□ -0.75
GPC3-203ENST00000406757 SURF6O75683 361 aaKnown RBP10.37□□□□□ -0.75
GPC3-203ENST00000406757 ITGA6P23229 1130 aa10.37□□□□□ -0.75
GPC3-203ENST00000406757 RFX5P48382 616 aaPredicted RBP10.37□□□□□ -0.75
GPC3-203ENST00000406757 VEGFBP49765 207 aa10.37□□□□□ -0.75
GPC3-203ENST00000406757 HDAC1Q13547 482 aaPredicted RBP10.37□□□□□ -0.75
GPC3-203ENST00000406757 CRY2Q49AN0 593 aa10.37□□□□□ -0.75
GPC3-203ENST00000406757 MAP1SQ66K74 1059 aaPredicted RBP10.37□□□□□ -0.75
GPC3-203ENST00000406757 SLC51AQ86UW1 340 aa10.37□□□□□ -0.75
GPC3-203ENST00000406757 SSH3Q8TE77 659 aa10.37□□□□□ -0.75
GPC3-203ENST00000406757 PUS3Q9BZE2 481 aaKnown RBP10.37□□□□□ -0.75
GPC3-203ENST00000406757 SNED1Q8TER0 1413 aa10.36□□□□□ -0.75
GPC3-203ENST00000406757 SMARCA5O60264 1052 aaPredicted RBP10.36□□□□□ -0.75
GPC3-203ENST00000406757 IFIT5Q13325 482 aaKnown RBP10.36□□□□□ -0.75
GPC3-203ENST00000406757 MTX1Q13505 466 aa10.36□□□□□ -0.75
GPC3-203ENST00000406757 CCDC57Q2TAC2 916 aa10.36□□□□□ -0.75
GPC3-203ENST00000406757 TAF7LQ5H9L4 462 aa10.36□□□□□ -0.75
GPC3-203ENST00000406757 PNMA8AQ86V59 439 aaPredicted RBP10.36□□□□□ -0.75
GPC3-203ENST00000406757 CNTROBQ8N137 903 aa10.36□□□□□ -0.75
GPC3-203ENST00000406757 GPC2Q8N158 579 aa10.36□□□□□ -0.75
GPC3-203ENST00000406757 JDP2Q8WYK2 163 aa10.36□□□□□ -0.75
GPC3-203ENST00000406757 RPGRQ92834 1020 aaKnown RBP10.36□□□□□ -0.75
GPC3-203ENST00000406757 PSMD1Q99460 953 aa10.36□□□□□ -0.75
GPC3-203ENST00000406757 GJA3Q9Y6H8 435 aa10.36□□□□□ -0.75
GPC3-203ENST00000406757 TAF1P21675 1872 aa10.36□□□□□ -0.75
GPC3-203ENST00000406757 COL4A1P02462 1669 aa10.35□□□□□ -0.75
GPC3-203ENST00000406757 COL4A5P29400 1685 aa10.35□□□□□ -0.75
GPC3-203ENST00000406757 ANKRD18BA2A2Z9 1011 aa10.35□□□□□ -0.75
GPC3-203ENST00000406757 HMMRO75330 724 aa10.35□□□□□ -0.75
GPC3-203ENST00000406757 PTPN12Q05209 780 aaKnown RBP10.35□□□□□ -0.75
GPC3-203ENST00000406757 SF3B3Q15393 1217 aaKnown RBP10.35□□□□□ -0.75
GPC3-203ENST00000406757 CCDC152Q4G0S7 254 aa10.35□□□□□ -0.75
GPC3-203ENST00000406757 LRRC24Q50LG9 513 aa10.35□□□□□ -0.75
GPC3-203ENST00000406757 CELF1Q92879 486 aaKnown RBP10.35□□□□□ -0.75
GPC3-203ENST00000406757 DCTPP1Q9H773 170 aa10.35□□□□□ -0.75
GPC3-203ENST00000406757 BMP2KQ9NSY1 1161 aaPredicted RBP10.35□□□□□ -0.75
GPC3-203ENST00000406757 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.35□□□□□ -0.75
GPC3-203ENST00000406757 LAMB2P55268 1798 aa10.34□□□□□ -0.75
GPC3-203ENST00000406757 ADAMTSL1Q8N6G6 1762 aa10.34□□□□□ -0.75
GPC3-203ENST00000406757 PPEF1O14829 653 aaPredicted RBP10.34□□□□□ -0.75
GPC3-203ENST00000406757 HSP90B1P14625 803 aaKnown RBP10.34□□□□□ -0.75
GPC3-203ENST00000406757 EIF6P56537 245 aaKnown RBP10.34□□□□□ -0.75
GPC3-203ENST00000406757 OS9Q13438 667 aaPredicted RBP10.34□□□□□ -0.75
GPC3-203ENST00000406757 ANKRD45Q5TZF3 282 aa10.34□□□□□ -0.75
GPC3-203ENST00000406757 AIDAQ96BJ3 306 aa10.34□□□□□ -0.75
GPC3-203ENST00000406757 TRPC6Q9Y210 931 aa10.34□□□□□ -0.75
GPC3-203ENST00000406757 LMOD1P29536 600 aaPredicted RBP10.33□□□□□ -0.76
GPC3-203ENST00000406757 HOXA10P31260 410 aaPredicted RBP10.33□□□□□ -0.76
GPC3-203ENST00000406757 CTCFP49711 727 aaPredicted RBP10.33□□□□□ -0.76
GPC3-203ENST00000406757 SCNN1DP51172 638 aa10.33□□□□□ -0.76
GPC3-203ENST00000406757 FMR1Q06787 632 aaKnown RBP eCLIP10.33□□□□□ -0.76
GPC3-203ENST00000406757 G3BP1Q13283 466 aaKnown RBP eCLIP10.33□□□□□ -0.76
GPC3-203ENST00000406757 DEFB115Q30KQ5 88 aa10.33□□□□□ -0.76
GPC3-203ENST00000406757 CC2D2BQ6DHV5 1058 aa10.33□□□□□ -0.76
GPC3-203ENST00000406757 DDX46Q7L014 1031 aaKnown RBP10.33□□□□□ -0.76
GPC3-203ENST00000406757 CENPQQ7L2Z9 268 aaPredicted RBP10.33□□□□□ -0.76
GPC3-203ENST00000406757 LARGE2Q8N3Y3 721 aa10.33□□□□□ -0.76
GPC3-203ENST00000406757 HELBQ8NG08 1087 aaPredicted RBP10.33□□□□□ -0.76
GPC3-203ENST00000406757 RBM17Q96I25 401 aaKnown RBP10.33□□□□□ -0.76
GPC3-203ENST00000406757 IL1RAPL2Q9NP60 686 aa10.33□□□□□ -0.76
GPC3-203ENST00000406757 COPRSQ9NQ92 184 aa10.33□□□□□ -0.76
GPC3-203ENST00000406757 PRDM10Q9NQV6 1147 aa10.33□□□□□ -0.76
GPC3-203ENST00000406757 ABT1Q9ULW3 272 aaKnown RBP10.33□□□□□ -0.76
GPC3-203ENST00000406757 MYH3P11055 1940 aa10.33□□□□□ -0.76
GPC3-203ENST00000406757 POTEFA5A3E0 1075 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 RASSF10A6NK89 507 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 EYA2O00167 538 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 MAP3K13O43283 966 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 SASH1O94885 1247 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 TIE1P35590 1138 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 EPS15P42566 896 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 VASPP50552 380 aaPredicted RBP10.32□□□□□ -0.76
GPC3-203ENST00000406757 LBX1P52954 281 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 TFCP2Q12800 502 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 LDHAL6AQ6ZMR3 332 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 ATG9AQ7Z3C6 839 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 ANKRD18AQ8IVF6 992 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 SMC5Q8IY18 1101 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 RASEFQ8IZ41 740 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 LNPKQ9C0E8 428 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 CNNM1Q9NRU3 951 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 WBP1LQ9NX94 342 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 NOP58Q9Y2X3 529 aaKnown RBP10.32□□□□□ -0.76
GPC3-203ENST00000406757 LTBP1Q14766 1721 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 RIC1Q4ADV7 1423 aa10.32□□□□□ -0.76
GPC3-203ENST00000406757 WDR33Q9C0J8 1336 aaKnown RBP10.32□□□□□ -0.76
GPC3-203ENST00000406757 WTIPA6NIX2 430 aaPredicted RBP10.31□□□□□ -0.76
GPC3-203ENST00000406757 SNAP23O00161 211 aa10.31□□□□□ -0.76
GPC3-203ENST00000406757 PPIP5K2O43314 1243 aa10.31□□□□□ -0.76
GPC3-203ENST00000406757 TAF5LO75529 589 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms