RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 KAZALD1Q96I82 304 aa13.01□□□□□ -0.33
FAM49A-202ENST00000406434 USP44Q9H0E7 712 aa13.01□□□□□ -0.33
FAM49A-202ENST00000406434 BICC1Q9H694 974 aaKnown RBP13.01□□□□□ -0.33
FAM49A-202ENST00000406434 CNNM1Q9NRU3 951 aa13.01□□□□□ -0.33
FAM49A-202ENST00000406434 GPRC5DQ9NZD1 345 aa13.01□□□□□ -0.33
FAM49A-202ENST00000406434 CNOT7Q9UIV1 285 aaKnown RBP13.01□□□□□ -0.33
FAM49A-202ENST00000406434 LEMD3Q9Y2U8 911 aa13.01□□□□□ -0.33
FAM49A-202ENST00000406434 ZNF804BA4D1E1 1349 aa13□□□□□ -0.33
FAM49A-202ENST00000406434 UTYO14607 1347 aa13□□□□□ -0.33
FAM49A-202ENST00000406434 H7C1D1 291 aa13□□□□□ -0.33
FAM49A-202ENST00000406434 FBXW7Q969H0 707 aa13□□□□□ -0.33
FAM49A-202ENST00000406434 ADARB2Q9NS39 739 aaKnown RBP13□□□□□ -0.33
FAM49A-202ENST00000406434 CIZ1Q9ULV3 898 aaPredicted RBP13□□□□□ -0.33
FAM49A-202ENST00000406434 SHTN1A0MZ66 631 aa12.99□□□□□ -0.33
FAM49A-202ENST00000406434 SNAP23O00161 211 aa12.99□□□□□ -0.33
FAM49A-202ENST00000406434 IPO8O15397 1037 aaKnown RBP12.99□□□□□ -0.33
FAM49A-202ENST00000406434 BRPF1P55201 1214 aaPredicted RBP12.99□□□□□ -0.33
FAM49A-202ENST00000406434 RBM26Q5T8P6 1007 aaKnown RBP12.99□□□□□ -0.33
FAM49A-202ENST00000406434 USP50Q70EL3 339 aaPredicted RBP12.99□□□□□ -0.33
FAM49A-202ENST00000406434 CNTROBQ8N137 903 aa12.99□□□□□ -0.33
FAM49A-202ENST00000406434 TXNRD3Q86VQ6 643 aa12.98□□□□□ -0.33
FAM49A-202ENST00000406434 MICALL2Q8IY33 904 aa12.98□□□□□ -0.33
FAM49A-202ENST00000406434 PUS3Q9BZE2 481 aaKnown RBP12.98□□□□□ -0.33
FAM49A-202ENST00000406434 LTBP1Q14766 1721 aa12.98□□□□□ -0.33
FAM49A-202ENST00000406434 KIF16BQ96L93 1317 aa12.97□□□□□ -0.33
FAM49A-202ENST00000406434 VIL1P09327 827 aaKnown RBP12.97□□□□□ -0.33
FAM49A-202ENST00000406434 UBTFL1P0CB47 393 aaPredicted RBP12.97□□□□□ -0.33
FAM49A-202ENST00000406434 KLRK1P26718 216 aa12.97□□□□□ -0.33
FAM49A-202ENST00000406434 PODNQ7Z5L7 613 aa12.97□□□□□ -0.33
FAM49A-202ENST00000406434 ANKRD44Q8N8A2 993 aa12.97□□□□□ -0.33
FAM49A-202ENST00000406434 ARHGAP45Q92619 1136 aa12.97□□□□□ -0.33
FAM49A-202ENST00000406434 CLUAP1Q96AJ1 413 aa12.97□□□□□ -0.33
FAM49A-202ENST00000406434 ZBED9Q6R2W3 1325 aa12.96□□□□□ -0.33
FAM49A-202ENST00000406434 USP17L3A6NCW0 530 aa12.96□□□□□ -0.33
FAM49A-202ENST00000406434 USP17L4A6NCW7 530 aa12.96□□□□□ -0.33
FAM49A-202ENST00000406434 ITGBL1O95965 494 aaPredicted RBP12.96□□□□□ -0.33
FAM49A-202ENST00000406434 RABL6Q3YEC7 729 aaPredicted RBP12.96□□□□□ -0.33
FAM49A-202ENST00000406434 TBC1D10BQ4KMP7 808 aaPredicted RBP12.96□□□□□ -0.33
FAM49A-202ENST00000406434 USP17L1Q7RTZ2 530 aa12.96□□□□□ -0.33
FAM49A-202ENST00000406434 SAMD7Q7Z3H4 446 aa12.96□□□□□ -0.33
FAM49A-202ENST00000406434 DPF2Q92785 391 aa12.96□□□□□ -0.33
FAM49A-202ENST00000406434 COA1Q9GZY4 146 aa12.96□□□□□ -0.33
FAM49A-202ENST00000406434 TNNQ9UQP3 1299 aa12.96□□□□□ -0.33
FAM49A-202ENST00000406434 MED23Q9ULK4 1368 aa12.96□□□□□ -0.34
FAM49A-202ENST00000406434 SCN9AQ15858 1988 aa12.95□□□□□ -0.34
FAM49A-202ENST00000406434 RPS12P25398 132 aaKnown RBP12.95□□□□□ -0.34
FAM49A-202ENST00000406434 HIRAP54198 1017 aaPredicted RBP12.95□□□□□ -0.34
FAM49A-202ENST00000406434 PLCB2Q00722 1185 aa12.95□□□□□ -0.34
FAM49A-202ENST00000406434 RSBN1LQ6PCB5 846 aaPredicted RBP12.95□□□□□ -0.34
FAM49A-202ENST00000406434 DNAJC5GQ8N7S2 189 aa12.95□□□□□ -0.34
FAM49A-202ENST00000406434 KLHDC4Q8TBB5 520 aa12.95□□□□□ -0.34
FAM49A-202ENST00000406434 TRPM4Q8TD43 1214 aa12.95□□□□□ -0.34
FAM49A-202ENST00000406434 MXD3Q9BW11 206 aa12.95□□□□□ -0.34
FAM49A-202ENST00000406434 CEP350Q5VT06 3117 aa12.95□□□□□ -0.34
FAM49A-202ENST00000406434 TRIM27P14373 513 aa12.94□□□□□ -0.34
FAM49A-202ENST00000406434 FMR1Q06787 632 aaKnown RBP eCLIP12.94□□□□□ -0.34
FAM49A-202ENST00000406434 LRRC24Q50LG9 513 aa12.94□□□□□ -0.34
FAM49A-202ENST00000406434 METTL24Q5JXM2 366 aa12.94□□□□□ -0.34
FAM49A-202ENST00000406434 TTLL5Q6EMB2 1281 aa12.94□□□□□ -0.34
FAM49A-202ENST00000406434 ATF7IPQ6VMQ6 1270 aa12.94□□□□□ -0.34
FAM49A-202ENST00000406434 MEIS3Q99687 375 aa12.94□□□□□ -0.34
FAM49A-202ENST00000406434 HDAC5Q9UQL6 1122 aa12.94□□□□□ -0.34
FAM49A-202ENST00000406434 RIPOR2Q9Y4F9 1068 aa12.94□□□□□ -0.34
FAM49A-202ENST00000406434 TRAF5O00463 557 aa12.94□□□□□ -0.34
FAM49A-202ENST00000406434 GTF2IP78347 998 aa12.94□□□□□ -0.34
FAM49A-202ENST00000406434 ZKSCAN2Q63HK3 967 aa12.94□□□□□ -0.34
FAM49A-202ENST00000406434 INTS3Q68E01 1043 aaKnown RBP12.94□□□□□ -0.34
FAM49A-202ENST00000406434 AGBL3Q8NEM8 1001 aa12.94□□□□□ -0.34
FAM49A-202ENST00000406434 CD209Q9NNX6 404 aa12.94□□□□□ -0.34
FAM49A-202ENST00000406434 LRRFIP2Q9Y608 721 aaKnown RBP12.94□□□□□ -0.34
FAM49A-202ENST00000406434 PASKQ96RG2 1323 aa12.93□□□□□ -0.34
FAM49A-202ENST00000406434 TMEM88BA6NKF7 163 aa12.93□□□□□ -0.34
FAM49A-202ENST00000406434 EGFRP00533 1210 aa12.93□□□□□ -0.34
FAM49A-202ENST00000406434 USP17L8P0C7I0 530 aa12.93□□□□□ -0.34
FAM49A-202ENST00000406434 ZNF804AQ7Z570 1209 aa12.93□□□□□ -0.34
FAM49A-202ENST00000406434 MROH5Q6ZUA9 1318 aa12.92□□□□□ -0.34
FAM49A-202ENST00000406434 GNAI3P08754 354 aa12.92□□□□□ -0.34
FAM49A-202ENST00000406434 UBE4AQ14139 1066 aa12.92□□□□□ -0.34
FAM49A-202ENST00000406434 KIF4BQ2VIQ3 1234 aa12.92□□□□□ -0.34
FAM49A-202ENST00000406434 DACT2Q5SW24 774 aa12.92□□□□□ -0.34
FAM49A-202ENST00000406434 STRIP1Q5VSL9 837 aa12.92□□□□□ -0.34
FAM49A-202ENST00000406434 USP48Q86UV5 1035 aa12.92□□□□□ -0.34
FAM49A-202ENST00000406434 ZC3H15Q8WU90 426 aaKnown RBP12.92□□□□□ -0.34
FAM49A-202ENST00000406434 KLRG1Q96E93 195 aa12.92□□□□□ -0.34
FAM49A-202ENST00000406434 GLIS2Q9BZE0 524 aaPredicted RBP12.92□□□□□ -0.34
FAM49A-202ENST00000406434 SIL1Q9H173 461 aa12.92□□□□□ -0.34
FAM49A-202ENST00000406434 MKRN1Q9UHC7 482 aaKnown RBP12.92□□□□□ -0.34
FAM49A-202ENST00000406434 JAG2Q9Y219 1238 aa12.92□□□□□ -0.34
FAM49A-202ENST00000406434 POLR2AP24928 1970 aaKnown RBP12.91□□□□□ -0.34
FAM49A-202ENST00000406434 ADAMTSL1Q8N6G6 1762 aa12.91□□□□□ -0.34
FAM49A-202ENST00000406434 GYG1P46976 350 aa12.91□□□□□ -0.34
FAM49A-202ENST00000406434 C15orf52Q6ZUT6 534 aaKnown RBP12.91□□□□□ -0.34
FAM49A-202ENST00000406434 VPS37DQ86XT2 251 aa12.91□□□□□ -0.34
FAM49A-202ENST00000406434 FTSJ3Q8IY81 847 aaKnown RBP12.91□□□□□ -0.34
FAM49A-202ENST00000406434 TMEM57Q8N5G2 664 aa12.91□□□□□ -0.34
FAM49A-202ENST00000406434 DCPSQ96C86 337 aaKnown RBP12.91□□□□□ -0.34
FAM49A-202ENST00000406434 GMLQ99445 158 aa12.91□□□□□ -0.34
FAM49A-202ENST00000406434 ZNF408Q9H9D4 720 aa12.91□□□□□ -0.34
FAM49A-202ENST00000406434 PGAP2Q9UHJ9 254 aa12.91□□□□□ -0.34
FAM49A-202ENST00000406434 ABT1Q9ULW3 272 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms