RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 INTS4Q96HW7 963 aaKnown RBP34.73■■■■□ 3.15
CSNK1E-205ENST00000405675 HMGB2P26583 209 aaKnown RBP34.72■■■■□ 3.15
CSNK1E-205ENST00000405675 NFIXQ14938 502 aa34.72■■■■□ 3.15
CSNK1E-205ENST00000405675 HELBQ8NG08 1087 aaPredicted RBP34.72■■■■□ 3.15
CSNK1E-205ENST00000405675 HELLSQ9NRZ9 838 aa34.72■■■■□ 3.15
CSNK1E-205ENST00000405675 PDRG1Q9NUG6 133 aa34.72■■■■□ 3.15
CSNK1E-205ENST00000405675 ZDHHC9Q9Y397 364 aa34.72■■■■□ 3.15
CSNK1E-205ENST00000405675 CYP46A1Q9Y6A2 500 aa34.72■■■■□ 3.15
CSNK1E-205ENST00000405675 LAMB2P55268 1798 aa34.72■■■■□ 3.15
CSNK1E-205ENST00000405675 RNF113AO15541 343 aaKnown RBP34.72■■■■□ 3.15
CSNK1E-205ENST00000405675 GYS1P13807 737 aa34.72■■■■□ 3.15
CSNK1E-205ENST00000405675 PI16Q6UXB8 463 aa34.72■■■■□ 3.15
CSNK1E-205ENST00000405675 COL24A1Q17RW2 1714 aa34.72■■■■□ 3.15
CSNK1E-205ENST00000405675 ABCC12Q96J65 1359 aa34.71■■■■□ 3.15
CSNK1E-205ENST00000405675 DDX11L8A8MPP1 907 aa34.71■■■■□ 3.15
CSNK1E-205ENST00000405675 TICAM2Q86XR7 235 aa34.71■■■■□ 3.15
CSNK1E-205ENST00000405675 AKT1S1Q96B36 256 aa34.71■■■■□ 3.15
CSNK1E-205ENST00000405675 TFCP2L1Q9NZI6 479 aa34.71■■■■□ 3.15
CSNK1E-205ENST00000405675 ZAP70P43403 619 aa34.7■■■■□ 3.15
CSNK1E-205ENST00000405675 SLC10A5Q5PT55 438 aa34.7■■■■□ 3.15
CSNK1E-205ENST00000405675 VPS53Q5VIR6 699 aa34.7■■■■□ 3.15
CSNK1E-205ENST00000405675 RNF20Q5VTR2 975 aa34.7■■■■□ 3.15
CSNK1E-205ENST00000405675 CCDC24Q8N4L8 307 aa34.7■■■■□ 3.15
CSNK1E-205ENST00000405675 TPTE2Q6XPS3 522 aa34.7■■■■□ 3.15
CSNK1E-205ENST00000405675 CLEC17AQ6ZS10 378 aa34.7■■■■□ 3.15
CSNK1E-205ENST00000405675 LIMCH1Q9UPQ0 1083 aa34.7■■■■□ 3.15
CSNK1E-205ENST00000405675 MROH5Q6ZUA9 1318 aa34.69■■■■□ 3.14
CSNK1E-205ENST00000405675 HMG20BQ9P0W2 317 aa34.68■■■■□ 3.14
CSNK1E-205ENST00000405675 MCAMP43121 646 aa34.67■■■■□ 3.14
CSNK1E-205ENST00000405675 RTL9Q8NET4 1388 aa34.67■■■■□ 3.14
CSNK1E-205ENST00000405675 MAST3O60307 1309 aa34.67■■■■□ 3.14
CSNK1E-205ENST00000405675 FGFR2P21802 821 aa34.67■■■■□ 3.14
CSNK1E-205ENST00000405675 TSGA10IPQ3SY00 556 aa34.67■■■■□ 3.14
CSNK1E-205ENST00000405675 U3KPZ7 1027 aaPredicted RBP34.67■■■■□ 3.14
CSNK1E-205ENST00000405675 BAG4O95429 457 aaKnown RBP34.66■■■■□ 3.14
CSNK1E-205ENST00000405675 LARGE1O95461 756 aa34.66■■■■□ 3.14
CSNK1E-205ENST00000405675 TRAK2O60296 914 aa34.66■■■■□ 3.14
CSNK1E-205ENST00000405675 PSMA5P28066 241 aa34.66■■■■□ 3.14
CSNK1E-205ENST00000405675 SF3B3Q15393 1217 aaKnown RBP34.66■■■■□ 3.14
CSNK1E-205ENST00000405675 PUM3Q15397 648 aaKnown RBP34.66■■■■□ 3.14
CSNK1E-205ENST00000405675 MPHOSPH8Q99549 860 aa34.66■■■■□ 3.14
CSNK1E-205ENST00000405675 CARMIL3Q8ND23 1372 aa34.66■■■■□ 3.14
CSNK1E-205ENST00000405675 COL4A1P02462 1669 aa34.65■■■■□ 3.14
CSNK1E-205ENST00000405675 M0R2C6 588 aa34.65■■■■□ 3.14
CSNK1E-205ENST00000405675 SNAP23O00161 211 aa34.64■■■■□ 3.14
CSNK1E-205ENST00000405675 PHKA1P46020 1223 aa34.64■■■■□ 3.14
CSNK1E-205ENST00000405675 ZNF512BQ96KM6 892 aaPredicted RBP34.64■■■■□ 3.14
CSNK1E-205ENST00000405675 EN1Q05925 392 aaPredicted RBP34.63■■■■□ 3.13
CSNK1E-205ENST00000405675 LPIN2Q92539 896 aa34.63■■■■□ 3.13
CSNK1E-205ENST00000405675 OSBP2Q969R2 916 aa34.63■■■■□ 3.13
CSNK1E-205ENST00000405675 NPHP1O15259 732 aa34.63■■■■□ 3.13
CSNK1E-205ENST00000405675 CCDC102BQ68D86 513 aa34.63■■■■□ 3.13
CSNK1E-205ENST00000405675 AKAP11Q9UKA4 1901 aa34.63■■■■□ 3.13
CSNK1E-205ENST00000405675 EZH2Q15910 746 aaKnown RBP34.62■■■■□ 3.13
CSNK1E-205ENST00000405675 COL23A1Q86Y22 540 aaPredicted RBP34.62■■■■□ 3.13
CSNK1E-205ENST00000405675 CYP21A2P08686 494 aa34.61■■■■□ 3.13
CSNK1E-205ENST00000405675 BLOC1S2Q6QNY1 142 aa34.61■■■■□ 3.13
CSNK1E-205ENST00000405675 TCEANC2Q96MN5 208 aa34.61■■■■□ 3.13
CSNK1E-205ENST00000405675 NLRP3Q96P20 1036 aa34.61■■■■□ 3.13
CSNK1E-205ENST00000405675 RPS6KB1P23443 525 aa34.61■■■■□ 3.13
CSNK1E-205ENST00000405675 TM4SF1P30408 202 aa34.6■■■■□ 3.13
CSNK1E-205ENST00000405675 IGHMBP2P38935 993 aaKnown RBP34.6■■■■□ 3.13
CSNK1E-205ENST00000405675 CAMKK2Q96RR4 588 aa34.6■■■■□ 3.13
CSNK1E-205ENST00000405675 DSCC1Q9BVC3 393 aa34.6■■■■□ 3.13
CSNK1E-205ENST00000405675 HSPD1P10809 573 aaKnown RBP34.59■■■■□ 3.13
CSNK1E-205ENST00000405675 RGPD3A6NKT7 1758 aaPredicted RBP34.59■■■■□ 3.13
CSNK1E-205ENST00000405675 RGPD4Q7Z3J3 1758 aa34.59■■■■□ 3.13
CSNK1E-205ENST00000405675 ARID4AP29374 1257 aaPredicted RBP34.58■■■■□ 3.13
CSNK1E-205ENST00000405675 FOXD4L5Q5VV16 416 aaPredicted RBP34.58■■■■□ 3.13
CSNK1E-205ENST00000405675 CNBD1Q8NA66 436 aa34.58■■■■□ 3.13
CSNK1E-205ENST00000405675 FOXD4L4Q8WXT5 416 aaPredicted RBP34.58■■■■□ 3.13
CSNK1E-205ENST00000405675 ARAP2Q8WZ64 1704 aa34.58■■■■□ 3.13
CSNK1E-205ENST00000405675 CDC5LQ99459 802 aaKnown RBP34.58■■■■□ 3.13
CSNK1E-205ENST00000405675 BRD1O95696 1058 aa34.57■■■■□ 3.12
CSNK1E-205ENST00000405675 ZFYP08048 801 aaPredicted RBP34.57■■■■□ 3.12
CSNK1E-205ENST00000405675 SLC5A1P13866 664 aa34.57■■■■□ 3.12
CSNK1E-205ENST00000405675 PIH1D3Q9NQM4 214 aaKnown RBP34.57■■■■□ 3.12
CSNK1E-205ENST00000405675 TPCN1Q9ULQ1 816 aa34.57■■■■□ 3.12
CSNK1E-205ENST00000405675 CASZ1Q86V15 1759 aa34.57■■■■□ 3.12
CSNK1E-205ENST00000405675 A0A0G2JLW4 131 aa34.57■■■■□ 3.12
CSNK1E-205ENST00000405675 ST3GAL1Q11201 340 aa34.57■■■■□ 3.12
CSNK1E-205ENST00000405675 KRT32Q14532 448 aa34.57■■■■□ 3.12
CSNK1E-205ENST00000405675 ME3Q16798 604 aa34.57■■■■□ 3.12
CSNK1E-205ENST00000405675 WASHC4Q2M389 1173 aa34.57■■■■□ 3.12
CSNK1E-205ENST00000405675 LRRFIP1Q32MZ4 808 aaKnown RBP34.57■■■■□ 3.12
CSNK1E-205ENST00000405675 ZSCAN31Q96LW9 406 aaPredicted RBP34.56■■■■□ 3.12
CSNK1E-205ENST00000405675 SERPINB2P05120 415 aa34.55■■■■□ 3.12
CSNK1E-205ENST00000405675 PRR5LQ6MZQ0 368 aa34.55■■■■□ 3.12
CSNK1E-205ENST00000405675 STOX1Q6ZVD7 989 aa34.55■■■■□ 3.12
CSNK1E-205ENST00000405675 UQCRFS1P1P0C7P4 283 aa34.55■■■■□ 3.12
CSNK1E-205ENST00000405675 CCDC83Q8IWF9 413 aa34.55■■■■□ 3.12
CSNK1E-205ENST00000405675 CHAMP1Q96JM3 812 aa34.55■■■■□ 3.12
CSNK1E-205ENST00000405675 ALDH8A1Q9H2A2 487 aaPredicted RBP34.55■■■■□ 3.12
CSNK1E-205ENST00000405675 CHRNDQ07001 517 aa34.54■■■■□ 3.12
CSNK1E-205ENST00000405675 DDR1Q08345 913 aa34.54■■■■□ 3.12
CSNK1E-205ENST00000405675 TOB2Q14106 344 aaPredicted RBP34.54■■■■□ 3.12
CSNK1E-205ENST00000405675 NEK1Q96PY6 1258 aa34.54■■■■□ 3.12
CSNK1E-205ENST00000405675 ANKRD18AQ8IVF6 992 aa34.54■■■■□ 3.12
CSNK1E-205ENST00000405675 APPBP2Q92624 585 aa34.54■■■■□ 3.12
CSNK1E-205ENST00000405675 PUS7LQ9H0K6 701 aaKnown RBP34.54■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms