RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 FHOD1Q9Y613 1164 aa11.13□□□□□ -0.63
SMC1B-202ENST00000404354 USP42Q9H9J4 1324 aaKnown RBP11.13□□□□□ -0.63
SMC1B-202ENST00000404354 KIF13AQ9H1H9 1805 aa11.13□□□□□ -0.63
SMC1B-202ENST00000404354 PLA2G4AP47712 749 aa11.13□□□□□ -0.63
SMC1B-202ENST00000404354 SARM1Q6SZW1 724 aa11.13□□□□□ -0.63
SMC1B-202ENST00000404354 XAGE3Q8WTP9 111 aa11.13□□□□□ -0.63
SMC1B-202ENST00000404354 TRIM34Q9BYJ4 488 aa11.13□□□□□ -0.63
SMC1B-202ENST00000404354 TMEM232C9JQI7 657 aa11.13□□□□□ -0.63
SMC1B-202ENST00000404354 SLC3A2P08195 630 aaKnown RBP11.13□□□□□ -0.63
SMC1B-202ENST00000404354 TMCO3Q6UWJ1 677 aa11.13□□□□□ -0.63
SMC1B-202ENST00000404354 ENGASEQ8NFI3 743 aa11.13□□□□□ -0.63
SMC1B-202ENST00000404354 TUBGCP6Q96RT7 1819 aa11.12□□□□□ -0.63
SMC1B-202ENST00000404354 NEMFO60524 1076 aa11.12□□□□□ -0.63
SMC1B-202ENST00000404354 CAPN2P17655 700 aa11.12□□□□□ -0.63
SMC1B-202ENST00000404354 USP31Q70CQ4 1352 aa11.12□□□□□ -0.63
SMC1B-202ENST00000404354 LINS1Q8NG48 757 aa11.12□□□□□ -0.63
SMC1B-202ENST00000404354 FANCGO15287 622 aa11.12□□□□□ -0.63
SMC1B-202ENST00000404354 CDC25BP30305 580 aa11.12□□□□□ -0.63
SMC1B-202ENST00000404354 MCMDC2Q4G0Z9 681 aa11.12□□□□□ -0.63
SMC1B-202ENST00000404354 ZNF396Q96N95 335 aaPredicted RBP11.12□□□□□ -0.63
SMC1B-202ENST00000404354 FKBP4Q02790 459 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMC1B-202ENST00000404354 KRT32Q14532 448 aa11.11□□□□□ -0.63
SMC1B-202ENST00000404354 DHX32Q7L7V1 743 aaKnown RBP11.11□□□□□ -0.63
SMC1B-202ENST00000404354 HMG20BQ9P0W2 317 aa11.11□□□□□ -0.63
SMC1B-202ENST00000404354 KIAA1468Q9P260 1216 aa11.11□□□□□ -0.63
SMC1B-202ENST00000404354 XRN1Q8IZH2 1706 aaKnown RBP11.11□□□□□ -0.63
SMC1B-202ENST00000404354 CTAGE5O15320 804 aa11.11□□□□□ -0.63
SMC1B-202ENST00000404354 ATP2B1P20020 1258 aa11.11□□□□□ -0.63
SMC1B-202ENST00000404354 NEXNQ0ZGT2 675 aa11.11□□□□□ -0.63
SMC1B-202ENST00000404354 MTX1Q13505 466 aa11.11□□□□□ -0.63
SMC1B-202ENST00000404354 KARSQ15046 597 aaKnown RBP11.11□□□□□ -0.63
SMC1B-202ENST00000404354 TNNI3KQ59H18 835 aa11.11□□□□□ -0.63
SMC1B-202ENST00000404354 DESI2Q9BSY9 194 aa11.11□□□□□ -0.63
SMC1B-202ENST00000404354 IRX2Q9BZI1 471 aaPredicted RBP11.11□□□□□ -0.63
SMC1B-202ENST00000404354 FPGT-TNNI3KV9GXZ4 949 aa11.11□□□□□ -0.63
SMC1B-202ENST00000404354 NRKQ7Z2Y5 1582 aa11.11□□□□□ -0.63
SMC1B-202ENST00000404354 ZNF202O95125 648 aa11.11□□□□□ -0.63
SMC1B-202ENST00000404354 FANCCQ00597 558 aa11.11□□□□□ -0.63
SMC1B-202ENST00000404354 FMR1NBQ8N0W7 255 aaPredicted RBP11.11□□□□□ -0.63
SMC1B-202ENST00000404354 ZNF594Q96JF6 807 aaPredicted RBP11.11□□□□□ -0.63
SMC1B-202ENST00000404354 MED23Q9ULK4 1368 aa11.11□□□□□ -0.63
SMC1B-202ENST00000404354 ALDH1L1O75891 902 aa11.1□□□□□ -0.63
SMC1B-202ENST00000404354 UBASH3AP57075 661 aa11.1□□□□□ -0.63
SMC1B-202ENST00000404354 EVCP57679 992 aa11.1□□□□□ -0.63
SMC1B-202ENST00000404354 SYNE3Q6ZMZ3 975 aa11.1□□□□□ -0.63
SMC1B-202ENST00000404354 ZNF330Q9Y3S2 320 aaPredicted RBP11.1□□□□□ -0.63
SMC1B-202ENST00000404354 C3P01024 1663 aa11.1□□□□□ -0.63
SMC1B-202ENST00000404354 ZNF609O15014 1411 aa11.1□□□□□ -0.63
SMC1B-202ENST00000404354 FDPSP14324 419 aaKnown RBP11.1□□□□□ -0.63
SMC1B-202ENST00000404354 PDIA3P30101 505 aaKnown RBP11.1□□□□□ -0.63
SMC1B-202ENST00000404354 GSDMDP57764 484 aa11.1□□□□□ -0.63
SMC1B-202ENST00000404354 GNG11P61952 73 aa11.1□□□□□ -0.63
SMC1B-202ENST00000404354 PNOCQ13519 176 aa11.1□□□□□ -0.63
SMC1B-202ENST00000404354 WASHC4Q2M389 1173 aa11.1□□□□□ -0.63
SMC1B-202ENST00000404354 TAF3Q5VWG9 929 aa11.1□□□□□ -0.63
SMC1B-202ENST00000404354 SMARCE1Q969G3 411 aa11.1□□□□□ -0.63
SMC1B-202ENST00000404354 C8orf76Q96K31 380 aa11.1□□□□□ -0.63
SMC1B-202ENST00000404354 CLIC6Q96NY7 704 aa11.1□□□□□ -0.63
SMC1B-202ENST00000404354 U3KPZ7 1027 aaPredicted RBP11.1□□□□□ -0.63
SMC1B-202ENST00000404354 E7EWF7 191 aa11.1□□□□□ -0.63
SMC1B-202ENST00000404354 CPLX1O14810 134 aa11.1□□□□□ -0.63
SMC1B-202ENST00000404354 PFKFB2O60825 505 aa11.1□□□□□ -0.63
SMC1B-202ENST00000404354 DDX58O95786 925 aaKnown RBP11.1□□□□□ -0.63
SMC1B-202ENST00000404354 TFRCP02786 760 aaKnown RBP11.1□□□□□ -0.63
SMC1B-202ENST00000404354 ADKP55263 362 aaKnown RBP11.1□□□□□ -0.63
SMC1B-202ENST00000404354 DENND2AQ9ULE3 1009 aa11.1□□□□□ -0.63
SMC1B-202ENST00000404354 ANKRD65E5RJM6 399 aa11.09□□□□□ -0.63
SMC1B-202ENST00000404354 RNMTO43148 476 aaKnown RBP11.09□□□□□ -0.63
SMC1B-202ENST00000404354 H2AFXP16104 143 aaPredicted RBP11.09□□□□□ -0.63
SMC1B-202ENST00000404354 ETF1P62495 437 aaKnown RBP11.09□□□□□ -0.63
SMC1B-202ENST00000404354 KRBA2Q6ZNG9 492 aa11.09□□□□□ -0.63
SMC1B-202ENST00000404354 CPLX3Q8WVH0 158 aa11.09□□□□□ -0.63
SMC1B-202ENST00000404354 A0A087WZG4 1122 aa11.09□□□□□ -0.63
SMC1B-202ENST00000404354 SPTLC2O15270 562 aa11.09□□□□□ -0.63
SMC1B-202ENST00000404354 NRDCO43847 1150 aa11.09□□□□□ -0.63
SMC1B-202ENST00000404354 SASH3O75995 380 aa11.09□□□□□ -0.63
SMC1B-202ENST00000404354 CAVIN2O95810 425 aa11.09□□□□□ -0.63
SMC1B-202ENST00000404354 ZNF827Q17R98 1081 aa11.09□□□□□ -0.63
SMC1B-202ENST00000404354 CREBRFQ8IUR6 639 aa11.09□□□□□ -0.63
SMC1B-202ENST00000404354 CCDC82Q8N4S0 544 aa11.09□□□□□ -0.63
SMC1B-202ENST00000404354 ORC3Q9UBD5 711 aaPredicted RBP11.09□□□□□ -0.63
SMC1B-202ENST00000404354 KIF28PB7ZC32 967 aa11.09□□□□□ -0.63
SMC1B-202ENST00000404354 UBE2Q2LH0YL09 131 aa11.09□□□□□ -0.63
SMC1B-202ENST00000404354 OAS2P29728 719 aaKnown RBP11.09□□□□□ -0.63
SMC1B-202ENST00000404354 LMBR1LQ6UX01 489 aa11.09□□□□□ -0.63
SMC1B-202ENST00000404354 C10orf67Q8IYJ2 551 aa11.09□□□□□ -0.63
SMC1B-202ENST00000404354 SMARCC2Q8TAQ2 1214 aa11.09□□□□□ -0.63
SMC1B-202ENST00000404354 WDR24Q96S15 920 aa11.09□□□□□ -0.63
SMC1B-202ENST00000404354 CALCOCO1Q9P1Z2 691 aa11.09□□□□□ -0.63
SMC1B-202ENST00000404354 KLF18A0A0U1RQI7 1052 aa11.08□□□□□ -0.64
SMC1B-202ENST00000404354 NEURL1BA8MQ27 555 aa11.08□□□□□ -0.64
SMC1B-202ENST00000404354 TRIM66O15016 1216 aa11.08□□□□□ -0.64
SMC1B-202ENST00000404354 FOXN1O15353 648 aa11.08□□□□□ -0.64
SMC1B-202ENST00000404354 PTPN12Q05209 780 aaKnown RBP11.08□□□□□ -0.64
SMC1B-202ENST00000404354 GCKRQ14397 625 aa11.08□□□□□ -0.64
SMC1B-202ENST00000404354 PLEKHO1Q53GL0 409 aaPredicted RBP11.08□□□□□ -0.64
SMC1B-202ENST00000404354 TRMT44Q8IYL2 757 aaKnown RBP11.08□□□□□ -0.64
SMC1B-202ENST00000404354 FANCLQ9NW38 375 aa11.08□□□□□ -0.64
SMC1B-202ENST00000404354 GOLGA8BA8MQT2 603 aa11.08□□□□□ -0.64
SMC1B-202ENST00000404354 PFKFB1P16118 471 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms