RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 SPEF2Q9C093 1822 aa22.43■■□□□ 1.18
THUMPD2-202ENST00000403537 ZNF804BA4D1E1 1349 aa22.43■■□□□ 1.18
THUMPD2-202ENST00000403537 USP17L3A6NCW0 530 aa22.42■■□□□ 1.18
THUMPD2-202ENST00000403537 USP17L4A6NCW7 530 aa22.42■■□□□ 1.18
THUMPD2-202ENST00000403537 RSBN1LQ6PCB5 846 aaPredicted RBP22.42■■□□□ 1.18
THUMPD2-202ENST00000403537 USP17L1Q7RTZ2 530 aa22.42■■□□□ 1.18
THUMPD2-202ENST00000403537 CNTNAP1P78357 1384 aa22.41■■□□□ 1.18
THUMPD2-202ENST00000403537 MMP14P50281 582 aa22.41■■□□□ 1.18
THUMPD2-202ENST00000403537 RRP1P56182 461 aaKnown RBP22.41■■□□□ 1.18
THUMPD2-202ENST00000403537 CHRNDQ07001 517 aa22.41■■□□□ 1.18
THUMPD2-202ENST00000403537 CDC37L1Q7L3B6 337 aa22.41■■□□□ 1.18
THUMPD2-202ENST00000403537 ITPRIPQ8IWB1 547 aa22.41■■□□□ 1.18
THUMPD2-202ENST00000403537 KCNQ5Q9NR82 932 aa22.41■■□□□ 1.18
THUMPD2-202ENST00000403537 LDHAL6AQ6ZMR3 332 aa22.4■■□□□ 1.18
THUMPD2-202ENST00000403537 TRPM4Q8TD43 1214 aa22.4■■□□□ 1.18
THUMPD2-202ENST00000403537 MYO3BQ8WXR4 1341 aa22.39■■□□□ 1.18
THUMPD2-202ENST00000403537 HIRAP54198 1017 aaPredicted RBP22.39■■□□□ 1.17
THUMPD2-202ENST00000403537 BICC1Q9H694 974 aaKnown RBP22.39■■□□□ 1.17
THUMPD2-202ENST00000403537 MKRN1Q9UHC7 482 aaKnown RBP22.39■■□□□ 1.17
THUMPD2-202ENST00000403537 COG6Q9Y2V7 657 aa22.39■■□□□ 1.17
THUMPD2-202ENST00000403537 RASSF10A6NK89 507 aa22.38■■□□□ 1.17
THUMPD2-202ENST00000403537 ZNF280AP59817 542 aaPredicted RBP22.38■■□□□ 1.17
THUMPD2-202ENST00000403537 TBC1D10BQ4KMP7 808 aaPredicted RBP22.38■■□□□ 1.17
THUMPD2-202ENST00000403537 STRIP1Q5VSL9 837 aa22.38■■□□□ 1.17
THUMPD2-202ENST00000403537 C15orf52Q6ZUT6 534 aaKnown RBP22.38■■□□□ 1.17
THUMPD2-202ENST00000403537 ANKRD44Q8N8A2 993 aa22.38■■□□□ 1.17
THUMPD2-202ENST00000403537 CNNM1Q9NRU3 951 aa22.38■■□□□ 1.17
THUMPD2-202ENST00000403537 ABT1Q9ULW3 272 aaKnown RBP22.38■■□□□ 1.17
THUMPD2-202ENST00000403537 HDAC5Q9UQL6 1122 aa22.38■■□□□ 1.17
THUMPD2-202ENST00000403537 USP17L8P0C7I0 530 aa22.37■■□□□ 1.17
THUMPD2-202ENST00000403537 UBTFL1P0CB47 393 aaPredicted RBP22.37■■□□□ 1.17
THUMPD2-202ENST00000403537 KIF4BQ2VIQ3 1234 aa22.37■■□□□ 1.17
THUMPD2-202ENST00000403537 SAMD7Q7Z3H4 446 aa22.37■■□□□ 1.17
THUMPD2-202ENST00000403537 DCPSQ96C86 337 aaKnown RBP22.37■■□□□ 1.17
THUMPD2-202ENST00000403537 LRRFIP2Q9Y608 721 aaKnown RBP22.37■■□□□ 1.17
THUMPD2-202ENST00000403537 DEFB115Q30KQ5 88 aa22.36■■□□□ 1.17
THUMPD2-202ENST00000403537 RABL6Q3YEC7 729 aaPredicted RBP22.36■■□□□ 1.17
THUMPD2-202ENST00000403537 OGFOD1Q8N543 542 aa22.36■■□□□ 1.17
THUMPD2-202ENST00000403537 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.36■■□□□ 1.17
THUMPD2-202ENST00000403537 GMLQ99445 158 aa22.36■■□□□ 1.17
THUMPD2-202ENST00000403537 SHTN1A0MZ66 631 aa22.35■■□□□ 1.17
THUMPD2-202ENST00000403537 ZNF804AQ7Z570 1209 aa22.35■■□□□ 1.17
THUMPD2-202ENST00000403537 GLIS2Q9BZE0 524 aaPredicted RBP22.35■■□□□ 1.17
THUMPD2-202ENST00000403537 WTIPA6NIX2 430 aaPredicted RBP22.34■■□□□ 1.17
THUMPD2-202ENST00000403537 TRAF5O00463 557 aa22.34■■□□□ 1.17
THUMPD2-202ENST00000403537 MVPQ14764 893 aaKnown RBP22.34■■□□□ 1.17
THUMPD2-202ENST00000403537 RBM26Q5T8P6 1007 aaKnown RBP22.34■■□□□ 1.17
THUMPD2-202ENST00000403537 C1orf115Q9H7X2 142 aa22.34■■□□□ 1.17
THUMPD2-202ENST00000403537 SUPT16HQ9Y5B9 1047 aaKnown RBP22.34■■□□□ 1.17
THUMPD2-202ENST00000403537 ZBTB7BO15156 539 aaPredicted RBP22.33■■□□□ 1.17
THUMPD2-202ENST00000403537 CELF2O95319 508 aaKnown RBP22.33■■□□□ 1.17
THUMPD2-202ENST00000403537 ECE1P42892 770 aa22.33■■□□□ 1.17
THUMPD2-202ENST00000403537 PDE3AQ14432 1141 aa22.33■■□□□ 1.17
THUMPD2-202ENST00000403537 DACT2Q5SW24 774 aa22.33■■□□□ 1.17
THUMPD2-202ENST00000403537 KRT26Q7Z3Y9 468 aa22.33■■□□□ 1.17
THUMPD2-202ENST00000403537 TXNRD3Q86VQ6 643 aa22.33■■□□□ 1.17
THUMPD2-202ENST00000403537 SCN9AQ15858 1988 aa22.32■■□□□ 1.16
THUMPD2-202ENST00000403537 TAF5LO75529 589 aa22.32■■□□□ 1.16
THUMPD2-202ENST00000403537 GNAI3P08754 354 aa22.32■■□□□ 1.16
THUMPD2-202ENST00000403537 MS4A1P11836 297 aa22.32■■□□□ 1.16
THUMPD2-202ENST00000403537 VEGFBP49765 207 aa22.32■■□□□ 1.16
THUMPD2-202ENST00000403537 CST9Q5W186 159 aa22.32■■□□□ 1.16
THUMPD2-202ENST00000403537 TTLL5Q6EMB2 1281 aa22.32■■□□□ 1.16
THUMPD2-202ENST00000403537 SULF1Q8IWU6 871 aa22.32■■□□□ 1.16
THUMPD2-202ENST00000403537 HELBQ8NG08 1087 aaPredicted RBP22.32■■□□□ 1.16
THUMPD2-202ENST00000403537 FBXW7Q969H0 707 aa22.32■■□□□ 1.16
THUMPD2-202ENST00000403537 ZNF594Q96JF6 807 aaPredicted RBP22.32■■□□□ 1.16
THUMPD2-202ENST00000403537 MYOZ2Q9NPC6 264 aa22.32■■□□□ 1.16
THUMPD2-202ENST00000403537 TLL2Q9Y6L7 1015 aa22.32■■□□□ 1.16
THUMPD2-202ENST00000403537 MROH5Q6ZUA9 1318 aa22.31■■□□□ 1.16
THUMPD2-202ENST00000403537 UBE4AQ14139 1066 aa22.31■■□□□ 1.16
THUMPD2-202ENST00000403537 USP48Q86UV5 1035 aa22.31■■□□□ 1.16
THUMPD2-202ENST00000403537 HHIPL1Q96JK4 782 aa22.31■■□□□ 1.16
THUMPD2-202ENST00000403537 CD209Q9NNX6 404 aa22.31■■□□□ 1.16
THUMPD2-202ENST00000403537 HDAC9Q9UKV0 1011 aa22.31■■□□□ 1.16
THUMPD2-202ENST00000403537 EGFRP00533 1210 aa22.3■■□□□ 1.16
THUMPD2-202ENST00000403537 HSPA1AP0DMV8 641 aaKnown RBP22.3■■□□□ 1.16
THUMPD2-202ENST00000403537 HSPA1BP0DMV9 641 aaKnown RBP22.3■■□□□ 1.16
THUMPD2-202ENST00000403537 A0A1B0GUL6 1792 aa22.3■■□□□ 1.16
THUMPD2-202ENST00000403537 PITPNM2Q9BZ72 1349 aa22.3■■□□□ 1.16
THUMPD2-202ENST00000403537 PSME4Q14997 1843 aa22.29■■□□□ 1.16
THUMPD2-202ENST00000403537 KLRK1P26718 216 aa22.29■■□□□ 1.16
THUMPD2-202ENST00000403537 GGA3Q9NZ52 723 aa22.29■■□□□ 1.16
THUMPD2-202ENST00000403537 IRS2Q9Y4H2 1338 aa22.29■■□□□ 1.16
THUMPD2-202ENST00000403537 GNAI2P04899 355 aa22.28■■□□□ 1.16
THUMPD2-202ENST00000403537 IL1R1P14778 569 aa22.28■■□□□ 1.16
THUMPD2-202ENST00000403537 GTF2IP78347 998 aa22.28■■□□□ 1.16
THUMPD2-202ENST00000403537 FMR1Q06787 632 aaKnown RBP eCLIP22.28■■□□□ 1.16
THUMPD2-202ENST00000403537 SCARF1Q14162 830 aa22.28■■□□□ 1.16
THUMPD2-202ENST00000403537 KLHDC4Q8TBB5 520 aa22.28■■□□□ 1.16
THUMPD2-202ENST00000403537 RIPOR2Q9Y4F9 1068 aa22.28■■□□□ 1.16
THUMPD2-202ENST00000403537 WDR33Q9C0J8 1336 aaKnown RBP22.28■■□□□ 1.16
THUMPD2-202ENST00000403537 FKBP1AP62942 108 aaKnown RBP22.27■■□□□ 1.16
THUMPD2-202ENST00000403537 PAXIP1Q6ZW49 1069 aaPredicted RBP22.27■■□□□ 1.16
THUMPD2-202ENST00000403537 SAPCD2Q86UD0 394 aa22.27■■□□□ 1.16
THUMPD2-202ENST00000403537 AIDAQ96BJ3 306 aa22.27■■□□□ 1.16
THUMPD2-202ENST00000403537 TRPM7Q96QT4 1865 aa22.27■■□□□ 1.16
THUMPD2-202ENST00000403537 CRBNQ96SW2 442 aa22.27■■□□□ 1.16
THUMPD2-202ENST00000403537 ZNF408Q9H9D4 720 aa22.27■■□□□ 1.16
THUMPD2-202ENST00000403537 DDX19BQ9UMR2 479 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms