RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 BRD1O95696 1058 aa14.67□□□□□ -0.06
CLIP4-203ENST00000401617 RPS6KB1P23443 525 aa14.67□□□□□ -0.06
CLIP4-203ENST00000401617 SH2B1Q9NRF2 756 aaPredicted RBP14.67□□□□□ -0.06
CLIP4-203ENST00000401617 C4BP0C0L5 1744 aa14.67□□□□□ -0.06
CLIP4-203ENST00000401617 COL4A1P02462 1669 aa14.66□□□□□ -0.06
CLIP4-203ENST00000401617 CYP21A2P08686 494 aa14.66□□□□□ -0.06
CLIP4-203ENST00000401617 UQCRFS1P1P0C7P4 283 aa14.66□□□□□ -0.06
CLIP4-203ENST00000401617 COL9A3Q14050 684 aaPredicted RBP14.66□□□□□ -0.06
CLIP4-203ENST00000401617 ERFEQ4G0M1 354 aa14.66□□□□□ -0.06
CLIP4-203ENST00000401617 TBC1D9BQ66K14 1250 aa14.66□□□□□ -0.06
CLIP4-203ENST00000401617 CCDC102BQ68D86 513 aa14.66□□□□□ -0.06
CLIP4-203ENST00000401617 BLOC1S2Q6QNY1 142 aa14.66□□□□□ -0.06
CLIP4-203ENST00000401617 OSBP2Q969R2 916 aa14.66□□□□□ -0.06
CLIP4-203ENST00000401617 MPHOSPH8Q99549 860 aa14.66□□□□□ -0.06
CLIP4-203ENST00000401617 C4AP0C0L4 1744 aa14.66□□□□□ -0.06
CLIP4-203ENST00000401617 DOCK2Q92608 1830 aa14.66□□□□□ -0.06
CLIP4-203ENST00000401617 M0R2C6 588 aa14.66□□□□□ -0.06
CLIP4-203ENST00000401617 HSPD1P10809 573 aaKnown RBP14.66□□□□□ -0.06
CLIP4-203ENST00000401617 BCL11BQ9C0K0 894 aaPredicted RBP14.66□□□□□ -0.06
CLIP4-203ENST00000401617 LARGE1O95461 756 aa14.65□□□□□ -0.06
CLIP4-203ENST00000401617 IGHMBP2P38935 993 aaKnown RBP14.65□□□□□ -0.06
CLIP4-203ENST00000401617 PHKA1P46020 1223 aa14.65□□□□□ -0.06
CLIP4-203ENST00000401617 PI16Q6UXB8 463 aa14.65□□□□□ -0.06
CLIP4-203ENST00000401617 TAF1P21675 1872 aa14.65□□□□□ -0.06
CLIP4-203ENST00000401617 GNPATO15228 680 aa14.64□□□□□ -0.07
CLIP4-203ENST00000401617 SLC5A1P13866 664 aa14.64□□□□□ -0.07
CLIP4-203ENST00000401617 ANKRD1Q15327 319 aa14.64□□□□□ -0.07
CLIP4-203ENST00000401617 TTF1Q15361 905 aaPredicted RBP14.64□□□□□ -0.07
CLIP4-203ENST00000401617 HELBQ8NG08 1087 aaPredicted RBP14.64□□□□□ -0.07
CLIP4-203ENST00000401617 APPBP2Q92624 585 aa14.64□□□□□ -0.07
CLIP4-203ENST00000401617 RTCBQ9Y3I0 505 aaKnown RBP14.64□□□□□ -0.07
CLIP4-203ENST00000401617 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.64□□□□□ -0.07
CLIP4-203ENST00000401617 SKOR2Q2VWA4 1001 aaPredicted RBP14.64□□□□□ -0.07
CLIP4-203ENST00000401617 AEBP2Q6ZN18 517 aaPredicted RBP14.64□□□□□ -0.07
CLIP4-203ENST00000401617 C3orf67Q6ZVT6 689 aa14.64□□□□□ -0.07
CLIP4-203ENST00000401617 SMIM5Q71RC9 77 aa14.64□□□□□ -0.07
CLIP4-203ENST00000401617 CDC5LQ99459 802 aaKnown RBP14.64□□□□□ -0.07
CLIP4-203ENST00000401617 NYXQ9GZU5 481 aa14.64□□□□□ -0.07
CLIP4-203ENST00000401617 SRP68Q9UHB9 627 aaKnown RBP14.64□□□□□ -0.07
CLIP4-203ENST00000401617 BRWD3Q6RI45 1802 aa14.64□□□□□ -0.07
CLIP4-203ENST00000401617 FOXP2O15409 715 aa14.63□□□□□ -0.07
CLIP4-203ENST00000401617 ST3GAL1Q11201 340 aa14.63□□□□□ -0.07
CLIP4-203ENST00000401617 TOB2Q14106 344 aaPredicted RBP14.63□□□□□ -0.07
CLIP4-203ENST00000401617 ME3Q16798 604 aa14.63□□□□□ -0.07
CLIP4-203ENST00000401617 AMIGO3Q86WK7 504 aa14.63□□□□□ -0.07
CLIP4-203ENST00000401617 NEK1Q96PY6 1258 aa14.63□□□□□ -0.07
CLIP4-203ENST00000401617 LARP6Q9BRS8 491 aaKnown RBP14.63□□□□□ -0.07
CLIP4-203ENST00000401617 QTRT2Q9H974 415 aaKnown RBP14.63□□□□□ -0.07
CLIP4-203ENST00000401617 TPCN1Q9ULQ1 816 aa14.63□□□□□ -0.07
CLIP4-203ENST00000401617 GOLGA6L22H0YM25 854 aa14.63□□□□□ -0.07
CLIP4-203ENST00000401617 ZPR1O75312 459 aa14.63□□□□□ -0.07
CLIP4-203ENST00000401617 ADD2P35612 726 aa14.63□□□□□ -0.07
CLIP4-203ENST00000401617 ZSCAN25Q6NSZ9 544 aa14.63□□□□□ -0.07
CLIP4-203ENST00000401617 ARHGEF1Q92888 912 aaKnown RBP14.63□□□□□ -0.07
CLIP4-203ENST00000401617 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.63□□□□□ -0.07
CLIP4-203ENST00000401617 UBR3Q6ZT12 1888 aa14.62□□□□□ -0.07
CLIP4-203ENST00000401617 CHRNDQ07001 517 aa14.62□□□□□ -0.07
CLIP4-203ENST00000401617 UBE3CQ15386 1083 aa14.62□□□□□ -0.07
CLIP4-203ENST00000401617 STOX1Q6ZVD7 989 aa14.62□□□□□ -0.07
CLIP4-203ENST00000401617 PIH1D3Q9NQM4 214 aaKnown RBP14.62□□□□□ -0.07
CLIP4-203ENST00000401617 SETDB2Q96T68 719 aa14.61□□□□□ -0.07
CLIP4-203ENST00000401617 BSDC1Q9NW68 430 aaPredicted RBP14.61□□□□□ -0.07
CLIP4-203ENST00000401617 HMGB1P09429 215 aaKnown RBP14.61□□□□□ -0.07
CLIP4-203ENST00000401617 PUS7LQ9H0K6 701 aaKnown RBP14.61□□□□□ -0.07
CLIP4-203ENST00000401617 TCHHQ07283 1943 aa14.61□□□□□ -0.07
CLIP4-203ENST00000401617 WDR33Q9C0J8 1336 aaKnown RBP14.6□□□□□ -0.07
CLIP4-203ENST00000401617 SNAP23O00161 211 aa14.6□□□□□ -0.07
CLIP4-203ENST00000401617 WASHC4Q2M389 1173 aa14.6□□□□□ -0.07
CLIP4-203ENST00000401617 BICDL1Q6ZP65 573 aa14.6□□□□□ -0.07
CLIP4-203ENST00000401617 ANKRD18AQ8IVF6 992 aa14.6□□□□□ -0.07
CLIP4-203ENST00000401617 CCDC83Q8IWF9 413 aa14.6□□□□□ -0.07
CLIP4-203ENST00000401617 SPATA5Q8NB90 893 aa14.6□□□□□ -0.07
CLIP4-203ENST00000401617 LRRC4BQ9NT99 713 aa14.6□□□□□ -0.07
CLIP4-203ENST00000401617 LMBRD1Q9NUN5 540 aa14.6□□□□□ -0.07
CLIP4-203ENST00000401617 TCRBV5S4A2TA0A5A2 114 aa14.6□□□□□ -0.07
CLIP4-203ENST00000401617 RASGRF1Q13972 1273 aa14.6□□□□□ -0.07
CLIP4-203ENST00000401617 CTNNA3Q9UI47 895 aa14.6□□□□□ -0.07
CLIP4-203ENST00000401617 SMC3Q9UQE7 1217 aa14.6□□□□□ -0.07
CLIP4-203ENST00000401617 ADRA2BP18089 450 aa14.59□□□□□ -0.07
CLIP4-203ENST00000401617 EXOSC10Q01780 885 aaKnown RBP14.59□□□□□ -0.07
CLIP4-203ENST00000401617 MCTP1Q6DN14 999 aa14.59□□□□□ -0.07
CLIP4-203ENST00000401617 TCEANC2Q96MN5 208 aa14.59□□□□□ -0.07
CLIP4-203ENST00000401617 AGXT2Q9BYV1 514 aa14.59□□□□□ -0.07
CLIP4-203ENST00000401617 ZNF804BA4D1E1 1349 aa14.59□□□□□ -0.07
CLIP4-203ENST00000401617 A0A0G2JLW4 131 aa14.58□□□□□ -0.07
CLIP4-203ENST00000401617 E7EWF7 191 aa14.58□□□□□ -0.07
CLIP4-203ENST00000401617 GPAA1O43292 621 aa14.58□□□□□ -0.07
CLIP4-203ENST00000401617 UBE4AQ14139 1066 aa14.58□□□□□ -0.07
CLIP4-203ENST00000401617 TRAPPC3LQ5T215 181 aa14.58□□□□□ -0.07
CLIP4-203ENST00000401617 SLC9C2Q5TAH2 1124 aa14.58□□□□□ -0.07
CLIP4-203ENST00000401617 TPTE2Q6XPS3 522 aa14.58□□□□□ -0.07
CLIP4-203ENST00000401617 FAM196AQ6ZSG2 479 aa14.58□□□□□ -0.07
CLIP4-203ENST00000401617 DHX32Q7L7V1 743 aaKnown RBP14.58□□□□□ -0.07
CLIP4-203ENST00000401617 NBPF5PQ86XG9 351 aaPredicted RBP14.58□□□□□ -0.07
CLIP4-203ENST00000401617 PDE6AP16499 860 aa14.58□□□□□ -0.08
CLIP4-203ENST00000401617 SYT1P21579 422 aa14.58□□□□□ -0.08
CLIP4-203ENST00000401617 KLHL40Q2TBA0 621 aa14.58□□□□□ -0.08
CLIP4-203ENST00000401617 FBXL16Q8N461 479 aa14.58□□□□□ -0.08
CLIP4-203ENST00000401617 NLRP3Q96P20 1036 aa14.58□□□□□ -0.08
CLIP4-203ENST00000401617 MINPP1Q9UNW1 487 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms