RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 VPS37CA5D8V6 355 aaPredicted RBP12.73□□□□□ -0.37
LINC00649-202ENST00000400353 IRS4O14654 1257 aaPredicted RBP12.73□□□□□ -0.37
LINC00649-202ENST00000400353 HSP90AA2PQ14568 343 aaPredicted RBP12.73□□□□□ -0.37
LINC00649-202ENST00000400353 HLFQ16534 295 aa12.73□□□□□ -0.37
LINC00649-202ENST00000400353 ATP2B3Q16720 1220 aa12.73□□□□□ -0.37
LINC00649-202ENST00000400353 METTL24Q5JXM2 366 aa12.73□□□□□ -0.37
LINC00649-202ENST00000400353 Q6ZUG5 572 aa12.73□□□□□ -0.37
LINC00649-202ENST00000400353 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
LINC00649-202ENST00000400353 DHX32Q7L7V1 743 aaKnown RBP12.73□□□□□ -0.37
LINC00649-202ENST00000400353 DZIP3Q86Y13 1208 aaKnown RBP12.73□□□□□ -0.37
LINC00649-202ENST00000400353 SLC4A9Q96Q91 983 aa12.73□□□□□ -0.37
LINC00649-202ENST00000400353 RBSNQ9H1K0 784 aa12.73□□□□□ -0.37
LINC00649-202ENST00000400353 ZBTB1Q9Y2K1 713 aa12.73□□□□□ -0.37
LINC00649-202ENST00000400353 CCDC9Q9Y3X0 531 aaKnown RBP12.73□□□□□ -0.37
LINC00649-202ENST00000400353 RIPOR2Q9Y4F9 1068 aa12.73□□□□□ -0.37
LINC00649-202ENST00000400353 MAST3O60307 1309 aa12.73□□□□□ -0.37
LINC00649-202ENST00000400353 SPATA31A1Q5TZJ5 1347 aa12.73□□□□□ -0.37
LINC00649-202ENST00000400353 ITGA6P23229 1130 aa12.73□□□□□ -0.37
LINC00649-202ENST00000400353 ZNF34Q8IZ26 560 aa12.73□□□□□ -0.37
LINC00649-202ENST00000400353 TRMT112Q9UI30 125 aaKnown RBP12.73□□□□□ -0.37
LINC00649-202ENST00000400353 KIF3AQ9Y496 699 aa12.73□□□□□ -0.37
LINC00649-202ENST00000400353 TAF6LQ9Y6J9 622 aa12.73□□□□□ -0.37
LINC00649-202ENST00000400353 RREB1Q92766 1687 aa12.72□□□□□ -0.37
LINC00649-202ENST00000400353 GADD45BO75293 160 aaPredicted RBP12.72□□□□□ -0.37
LINC00649-202ENST00000400353 HSPD1P10809 573 aaKnown RBP12.72□□□□□ -0.37
LINC00649-202ENST00000400353 KRT85P78386 507 aa12.72□□□□□ -0.37
LINC00649-202ENST00000400353 TTF1Q15361 905 aaPredicted RBP12.72□□□□□ -0.37
LINC00649-202ENST00000400353 DDB1Q16531 1140 aa12.72□□□□□ -0.37
LINC00649-202ENST00000400353 HS1BP3Q53T59 392 aa12.72□□□□□ -0.37
LINC00649-202ENST00000400353 LDHAL6AQ6ZMR3 332 aa12.72□□□□□ -0.37
LINC00649-202ENST00000400353 FBXO41Q8TF61 875 aa12.72□□□□□ -0.37
LINC00649-202ENST00000400353 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.72□□□□□ -0.37
LINC00649-202ENST00000400353 LRP5O75197 1615 aa12.72□□□□□ -0.37
LINC00649-202ENST00000400353 MYH3P11055 1940 aa12.72□□□□□ -0.37
LINC00649-202ENST00000400353 PFKFB2O60825 505 aa12.71□□□□□ -0.37
LINC00649-202ENST00000400353 GPTP24298 496 aa12.71□□□□□ -0.37
LINC00649-202ENST00000400353 FAM184AQ8NB25 1140 aa12.71□□□□□ -0.37
LINC00649-202ENST00000400353 APPBP2Q92624 585 aa12.71□□□□□ -0.37
LINC00649-202ENST00000400353 SYTL4Q96C24 671 aaPredicted RBP12.71□□□□□ -0.37
LINC00649-202ENST00000400353 GDPD2Q9HCC8 539 aa12.71□□□□□ -0.37
LINC00649-202ENST00000400353 CNNM1Q9NRU3 951 aa12.71□□□□□ -0.37
LINC00649-202ENST00000400353 ELP1O95163 1332 aa12.71□□□□□ -0.37
LINC00649-202ENST00000400353 UQCRFS1P1P0C7P4 283 aa12.71□□□□□ -0.38
LINC00649-202ENST00000400353 ADORA1P30542 326 aa12.71□□□□□ -0.38
LINC00649-202ENST00000400353 FKBP4Q02790 459 aaKnown RBP eCLIP12.71□□□□□ -0.38
LINC00649-202ENST00000400353 FOXD4L6Q3SYB3 417 aaPredicted RBP12.71□□□□□ -0.38
LINC00649-202ENST00000400353 FOXD4L3Q6VB84 417 aaPredicted RBP12.71□□□□□ -0.38
LINC00649-202ENST00000400353 FBXL16Q8N461 479 aa12.71□□□□□ -0.38
LINC00649-202ENST00000400353 TCEANC2Q96MN5 208 aa12.71□□□□□ -0.38
LINC00649-202ENST00000400353 AGXT2Q9BYV1 514 aa12.71□□□□□ -0.38
LINC00649-202ENST00000400353 GREM2Q9H772 168 aa12.71□□□□□ -0.38
LINC00649-202ENST00000400353 CCDC87Q9NVE4 849 aa12.71□□□□□ -0.38
LINC00649-202ENST00000400353 NUP98P52948 1817 aa12.71□□□□□ -0.38
LINC00649-202ENST00000400353 MROH5Q6ZUA9 1318 aa12.71□□□□□ -0.38
LINC00649-202ENST00000400353 NWD2Q9ULI1 1742 aa12.7□□□□□ -0.38
LINC00649-202ENST00000400353 FIBPO43427 364 aa12.7□□□□□ -0.38
LINC00649-202ENST00000400353 CLCN1P35523 988 aa12.7□□□□□ -0.38
LINC00649-202ENST00000400353 EIF5P55010 431 aaKnown RBP12.7□□□□□ -0.38
LINC00649-202ENST00000400353 HMGN5P82970 282 aaKnown RBP12.7□□□□□ -0.38
LINC00649-202ENST00000400353 EXOSC10Q01780 885 aaKnown RBP12.7□□□□□ -0.38
LINC00649-202ENST00000400353 DNM1Q05193 864 aaKnown RBP12.7□□□□□ -0.38
LINC00649-202ENST00000400353 UVSSAQ2YD98 709 aa12.7□□□□□ -0.38
LINC00649-202ENST00000400353 PARP10Q53GL7 1025 aa12.7□□□□□ -0.38
LINC00649-202ENST00000400353 SCAND2PQ9GZW5 306 aaPredicted RBP12.7□□□□□ -0.38
LINC00649-202ENST00000400353 RRAGDQ9NQL2 400 aaPredicted RBP12.7□□□□□ -0.38
LINC00649-202ENST00000400353 SLIT2O94813 1529 aa12.7□□□□□ -0.38
LINC00649-202ENST00000400353 ESPNB1AK53 854 aa12.69□□□□□ -0.38
LINC00649-202ENST00000400353 E7EWF7 191 aa12.69□□□□□ -0.38
LINC00649-202ENST00000400353 M0R2C6 588 aa12.69□□□□□ -0.38
LINC00649-202ENST00000400353 BARGINQ6ZT62 677 aa12.69□□□□□ -0.38
LINC00649-202ENST00000400353 STOX1Q6ZVD7 989 aa12.69□□□□□ -0.38
LINC00649-202ENST00000400353 SMARCC1Q92922 1105 aaPredicted RBP12.69□□□□□ -0.38
LINC00649-202ENST00000400353 BCL9LQ86UU0 1499 aa12.69□□□□□ -0.38
LINC00649-202ENST00000400353 CHGBP05060 677 aa12.69□□□□□ -0.38
LINC00649-202ENST00000400353 KCNA4P22459 653 aa12.69□□□□□ -0.38
LINC00649-202ENST00000400353 STK3Q13188 491 aa12.69□□□□□ -0.38
LINC00649-202ENST00000400353 IMMTQ16891 758 aaKnown RBP12.69□□□□□ -0.38
LINC00649-202ENST00000400353 WASHC4Q2M389 1173 aa12.69□□□□□ -0.38
LINC00649-202ENST00000400353 VGLL2Q8N8G2 317 aa12.69□□□□□ -0.38
LINC00649-202ENST00000400353 SMARCC2Q8TAQ2 1214 aa12.69□□□□□ -0.38
LINC00649-202ENST00000400353 BRF1Q92994 677 aa12.69□□□□□ -0.38
LINC00649-202ENST00000400353 OSBP2Q969R2 916 aa12.69□□□□□ -0.38
LINC00649-202ENST00000400353 ZNF274Q96GC6 653 aaPredicted RBP12.69□□□□□ -0.38
LINC00649-202ENST00000400353 PDLIM2Q96JY6 352 aa12.69□□□□□ -0.38
LINC00649-202ENST00000400353 ZSCAN16Q9H4T2 348 aaPredicted RBP12.69□□□□□ -0.38
LINC00649-202ENST00000400353 USP21Q9UK80 565 aa12.69□□□□□ -0.38
LINC00649-202ENST00000400353 ATRNO75882 1429 aa12.68□□□□□ -0.38
LINC00649-202ENST00000400353 SPATA31A5Q5VU36 1347 aa12.68□□□□□ -0.38
LINC00649-202ENST00000400353 SPATA31A7Q8IWB4 1347 aa12.68□□□□□ -0.38
LINC00649-202ENST00000400353 WDR19Q8NEZ3 1342 aa12.68□□□□□ -0.38
LINC00649-202ENST00000400353 PDE8BO95263 885 aa12.68□□□□□ -0.38
LINC00649-202ENST00000400353 ZAP70P43403 619 aa12.68□□□□□ -0.38
LINC00649-202ENST00000400353 CDC37L1Q7L3B6 337 aa12.68□□□□□ -0.38
LINC00649-202ENST00000400353 FNBP4Q8N3X1 1017 aaPredicted RBP12.68□□□□□ -0.38
LINC00649-202ENST00000400353 CCDC85AQ96PX6 553 aaPredicted RBP12.68□□□□□ -0.38
LINC00649-202ENST00000400353 LAMA4Q16363 1823 aa12.68□□□□□ -0.38
LINC00649-202ENST00000400353 ARAP2Q8WZ64 1704 aa12.68□□□□□ -0.38
LINC00649-202ENST00000400353 RTL9Q8NET4 1388 aa12.68□□□□□ -0.38
LINC00649-202ENST00000400353 ARID4AP29374 1257 aaPredicted RBP12.68□□□□□ -0.38
LINC00649-202ENST00000400353 PUM3Q15397 648 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms