RNA–Protein interactions for RNA: ENST00000400306.2

LINC02408-201, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 2 BASIC

Gene LINC02408, Length 1,766 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-201ENST00000400306 CCDC85AQ96PX6 553 aaPredicted RBP9.78□□□□□ -0.84
LINC02408-201ENST00000400306 ZBTB40Q9NUA8 1239 aa9.78□□□□□ -0.84
LINC02408-201ENST00000400306 RNF181Q9P0P0 153 aa9.78□□□□□ -0.84
LINC02408-201ENST00000400306 SPEF2Q9C093 1822 aa9.78□□□□□ -0.84
LINC02408-201ENST00000400306 UTYO14607 1347 aa9.77□□□□□ -0.84
LINC02408-201ENST00000400306 SH3TC1Q8TE82 1336 aa9.77□□□□□ -0.84
LINC02408-201ENST00000400306 IRS4O14654 1257 aaPredicted RBP9.77□□□□□ -0.85
LINC02408-201ENST00000400306 GNAI3P08754 354 aa9.77□□□□□ -0.85
LINC02408-201ENST00000400306 TAF1P21675 1872 aa9.77□□□□□ -0.85
LINC02408-201ENST00000400306 CNBD1Q8NA66 436 aa9.77□□□□□ -0.85
LINC02408-201ENST00000400306 ABHD8Q96I13 439 aa9.77□□□□□ -0.85
LINC02408-201ENST00000400306 COL4A1P02462 1669 aa9.77□□□□□ -0.85
LINC02408-201ENST00000400306 IBTKQ9P2D0 1353 aaPredicted RBP9.76□□□□□ -0.85
LINC02408-201ENST00000400306 COL11A2P13942 1736 aaPredicted RBP9.76□□□□□ -0.85
LINC02408-201ENST00000400306 GNAI2P04899 355 aa9.76□□□□□ -0.85
LINC02408-201ENST00000400306 NUDT7P0C024 238 aa9.76□□□□□ -0.85
LINC02408-201ENST00000400306 PDE4AP27815 886 aa9.76□□□□□ -0.85
LINC02408-201ENST00000400306 CTCFP49711 727 aaPredicted RBP9.76□□□□□ -0.85
LINC02408-201ENST00000400306 ANKRD44Q8N8A2 993 aa9.76□□□□□ -0.85
LINC02408-201ENST00000400306 NYXQ9GZU5 481 aa9.76□□□□□ -0.85
LINC02408-201ENST00000400306 CRISPLD2Q9H0B8 497 aa9.76□□□□□ -0.85
LINC02408-201ENST00000400306 BICC1Q9H694 974 aaKnown RBP9.76□□□□□ -0.85
LINC02408-201ENST00000400306 PCDHB15Q9Y5E8 787 aa9.76□□□□□ -0.85
LINC02408-201ENST00000400306 PDE4DIPQ5VU43 2346 aa9.76□□□□□ -0.85
LINC02408-201ENST00000400306 CDHR2Q9BYE9 1310 aa9.76□□□□□ -0.85
LINC02408-201ENST00000400306 FOXO4P98177 505 aa9.75□□□□□ -0.85
LINC02408-201ENST00000400306 TPTE2Q6XPS3 522 aa9.75□□□□□ -0.85
LINC02408-201ENST00000400306 AIDAQ96BJ3 306 aa9.75□□□□□ -0.85
LINC02408-201ENST00000400306 CHMP3Q9Y3E7 222 aa9.75□□□□□ -0.85
LINC02408-201ENST00000400306 CACNA1SQ13698 1873 aa9.75□□□□□ -0.85
LINC02408-201ENST00000400306 DPEP1P16444 411 aa9.75□□□□□ -0.85
LINC02408-201ENST00000400306 ST5P78524 1137 aa9.75□□□□□ -0.85
LINC02408-201ENST00000400306 KRTAP3-3Q9BYR6 98 aa9.75□□□□□ -0.85
LINC02408-201ENST00000400306 KRTAP3-2Q9BYR7 98 aa9.75□□□□□ -0.85
LINC02408-201ENST00000400306 MKRN1Q9UHC7 482 aaKnown RBP9.75□□□□□ -0.85
LINC02408-201ENST00000400306 DLEC1Q9Y238 1755 aa9.74□□□□□ -0.85
LINC02408-201ENST00000400306 PDE8AO60658 829 aa9.74□□□□□ -0.85
LINC02408-201ENST00000400306 CTSWP56202 376 aa9.74□□□□□ -0.85
LINC02408-201ENST00000400306 CEP85Q6P2H3 762 aa9.74□□□□□ -0.85
LINC02408-201ENST00000400306 LMBR1LQ6UX01 489 aa9.74□□□□□ -0.85
LINC02408-201ENST00000400306 ZNF687Q8N1G0 1237 aa9.74□□□□□ -0.85
LINC02408-201ENST00000400306 PTCD2Q8WV60 388 aaKnown RBP9.74□□□□□ -0.85
LINC02408-201ENST00000400306 PNMA6EA0A0J9YXQ4 647 aa9.73□□□□□ -0.85
LINC02408-201ENST00000400306 VEGFAP15692 232 aaPredicted RBP9.73□□□□□ -0.85
LINC02408-201ENST00000400306 RGS19P49795 217 aa9.73□□□□□ -0.85
LINC02408-201ENST00000400306 SIRT2Q8IXJ6 389 aa9.73□□□□□ -0.85
LINC02408-201ENST00000400306 CHMP4BQ9H444 224 aaKnown RBP9.73□□□□□ -0.85
LINC02408-201ENST00000400306 TBC1D12O60347 775 aa9.73□□□□□ -0.85
LINC02408-201ENST00000400306 SLC10A5Q5PT55 438 aa9.73□□□□□ -0.85
LINC02408-201ENST00000400306 TTLL11Q8NHH1 800 aa9.73□□□□□ -0.85
LINC02408-201ENST00000400306 KLHDC4Q8TBB5 520 aa9.73□□□□□ -0.85
LINC02408-201ENST00000400306 PLA2G12BQ9BX93 195 aa9.73□□□□□ -0.85
LINC02408-201ENST00000400306 GREM2Q9H772 168 aa9.73□□□□□ -0.85
LINC02408-201ENST00000400306 SEC31BQ9NQW1 1179 aa9.73□□□□□ -0.85
LINC02408-201ENST00000400306 ZC3H4Q9UPT8 1303 aaKnown RBP9.73□□□□□ -0.85
LINC02408-201ENST00000400306 SRGAP3O43295 1099 aa9.72□□□□□ -0.85
LINC02408-201ENST00000400306 LBX1P52954 281 aa9.72□□□□□ -0.85
LINC02408-201ENST00000400306 ATP8B2P98198 1209 aa9.72□□□□□ -0.85
LINC02408-201ENST00000400306 PPP1R15BQ5SWA1 713 aa9.72□□□□□ -0.85
LINC02408-201ENST00000400306 SLC51AQ86UW1 340 aa9.72□□□□□ -0.85
LINC02408-201ENST00000400306 ZNF594Q96JF6 807 aaPredicted RBP9.72□□□□□ -0.85
LINC02408-201ENST00000400306 PA2G4Q9UQ80 394 aaKnown RBP9.72□□□□□ -0.85
LINC02408-201ENST00000400306 RBM19Q9Y4C8 960 aaKnown RBP9.72□□□□□ -0.85
LINC02408-201ENST00000400306 CNTNAP1P78357 1384 aa9.72□□□□□ -0.85
LINC02408-201ENST00000400306 CCDC85CA6NKD9 419 aa9.71□□□□□ -0.85
LINC02408-201ENST00000400306 CHRNA5P30532 468 aa9.71□□□□□ -0.85
LINC02408-201ENST00000400306 RABL6Q3YEC7 729 aaPredicted RBP9.71□□□□□ -0.85
LINC02408-201ENST00000400306 B4GALNT3Q6L9W6 998 aa9.71□□□□□ -0.85
LINC02408-201ENST00000400306 SPNS2Q8IVW8 549 aa9.71□□□□□ -0.85
LINC02408-201ENST00000400306 NLRP3Q96P20 1036 aa9.71□□□□□ -0.85
LINC02408-201ENST00000400306 PIM2Q9P1W9 311 aa9.71□□□□□ -0.85
LINC02408-201ENST00000400306 RIC1Q4ADV7 1423 aa9.71□□□□□ -0.85
LINC02408-201ENST00000400306 IGHDP01880 384 aa9.7□□□□□ -0.86
LINC02408-201ENST00000400306 CSF1RP07333 972 aa9.7□□□□□ -0.86
LINC02408-201ENST00000400306 RFX5P48382 616 aaPredicted RBP9.7□□□□□ -0.86
LINC02408-201ENST00000400306 DALRD3Q5D0E6 543 aaKnown RBP9.7□□□□□ -0.86
LINC02408-201ENST00000400306 C2CD5Q86YS7 1000 aa9.7□□□□□ -0.86
LINC02408-201ENST00000400306 BRIP1Q9BX63 1249 aa9.7□□□□□ -0.86
LINC02408-201ENST00000400306 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.7□□□□□ -0.86
LINC02408-201ENST00000400306 LHX6Q9UPM6 363 aa9.7□□□□□ -0.86
LINC02408-201ENST00000400306 HDAC5Q9UQL6 1122 aa9.7□□□□□ -0.86
LINC02408-201ENST00000400306 GLTPD2A6NH11 291 aa9.7□□□□□ -0.86
LINC02408-201ENST00000400306 TNRC18O15417 2968 aaPredicted RBP9.7□□□□□ -0.86
LINC02408-201ENST00000400306 KCNA3P22001 575 aa9.7□□□□□ -0.86
LINC02408-201ENST00000400306 ITGA6P23229 1130 aa9.7□□□□□ -0.86
LINC02408-201ENST00000400306 MTX1Q13505 466 aa9.7□□□□□ -0.86
LINC02408-201ENST00000400306 SF3B3Q15393 1217 aaKnown RBP9.7□□□□□ -0.86
LINC02408-201ENST00000400306 CCDC152Q4G0S7 254 aa9.7□□□□□ -0.86
LINC02408-201ENST00000400306 RPAP2Q8IXW5 612 aaPredicted RBP9.7□□□□□ -0.86
LINC02408-201ENST00000400306 RPGRQ92834 1020 aaKnown RBP9.7□□□□□ -0.86
LINC02408-201ENST00000400306 SIL1Q9H173 461 aa9.7□□□□□ -0.86
LINC02408-201ENST00000400306 A0A1B0GUL6 1792 aa9.7□□□□□ -0.86
LINC02408-201ENST00000400306 ANKRD18BA2A2Z9 1011 aa9.69□□□□□ -0.86
LINC02408-201ENST00000400306 APBB1O00213 710 aa9.69□□□□□ -0.86
LINC02408-201ENST00000400306 IFIT5Q13325 482 aaKnown RBP9.69□□□□□ -0.86
LINC02408-201ENST00000400306 SSH3Q8TE77 659 aa9.69□□□□□ -0.86
LINC02408-201ENST00000400306 CELF1Q92879 486 aaKnown RBP9.69□□□□□ -0.86
LINC02408-201ENST00000400306 LARP6Q9BRS8 491 aaKnown RBP9.69□□□□□ -0.86
LINC02408-201ENST00000400306 PUS3Q9BZE2 481 aaKnown RBP9.69□□□□□ -0.86
LINC02408-201ENST00000400306 PPP4R2Q9NY27 417 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms