RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 MED23Q9ULK4 1368 aa8.38□□□□□ -1.07
USP16-203ENST00000399975 APBB1O00213 710 aa8.37□□□□□ -1.07
USP16-203ENST00000399975 SEMA3EO15041 775 aa8.37□□□□□ -1.07
USP16-203ENST00000399975 UQCRFS1P1P0C7P4 283 aa8.37□□□□□ -1.07
USP16-203ENST00000399975 GPSM2P81274 684 aa8.37□□□□□ -1.07
USP16-203ENST00000399975 SOGA3Q5TF21 947 aa8.37□□□□□ -1.07
USP16-203ENST00000399975 FBXO33Q7Z6M2 555 aa8.37□□□□□ -1.07
USP16-203ENST00000399975 DBNDD2Q9BQY9 259 aa8.37□□□□□ -1.07
USP16-203ENST00000399975 MYH7P12883 1935 aa8.37□□□□□ -1.07
USP16-203ENST00000399975 MAST2Q6P0Q8 1798 aa8.37□□□□□ -1.07
USP16-203ENST00000399975 DPEP1P16444 411 aa8.37□□□□□ -1.07
USP16-203ENST00000399975 PRPF40BQ6NWY9 871 aaKnown RBP8.37□□□□□ -1.07
USP16-203ENST00000399975 TTLL6Q8N841 843 aa8.37□□□□□ -1.07
USP16-203ENST00000399975 HAUS7Q99871 368 aa8.37□□□□□ -1.07
USP16-203ENST00000399975 CCDC8Q9H0W5 538 aaPredicted RBP8.37□□□□□ -1.07
USP16-203ENST00000399975 TLR7Q9NYK1 1049 aaKnown RBP8.37□□□□□ -1.07
USP16-203ENST00000399975 GSPT1P15170 499 aaKnown RBP8.37□□□□□ -1.07
USP16-203ENST00000399975 CHRNA5P30532 468 aa8.37□□□□□ -1.07
USP16-203ENST00000399975 TIMM10P62072 90 aa8.37□□□□□ -1.07
USP16-203ENST00000399975 CCDC158Q5M9N0 1113 aa8.37□□□□□ -1.07
USP16-203ENST00000399975 RGS3P49796 1198 aa8.36□□□□□ -1.07
USP16-203ENST00000399975 PIM2Q9P1W9 311 aa8.36□□□□□ -1.07
USP16-203ENST00000399975 GGA1Q9UJY5 639 aa8.36□□□□□ -1.07
USP16-203ENST00000399975 TAF5LO75529 589 aa8.36□□□□□ -1.07
USP16-203ENST00000399975 ADORA1P30542 326 aa8.36□□□□□ -1.07
USP16-203ENST00000399975 TMED8Q6PL24 325 aaPredicted RBP8.36□□□□□ -1.07
USP16-203ENST00000399975 SKAP1Q86WV1 359 aa8.36□□□□□ -1.07
USP16-203ENST00000399975 TBC1D16Q8TBP0 767 aa8.36□□□□□ -1.07
USP16-203ENST00000399975 ZNF622Q969S3 477 aaKnown RBP eCLIP8.36□□□□□ -1.072e-6■□□□□ 10.9
USP16-203ENST00000399975 EIF5BO60841 1220 aaKnown RBP8.35□□□□□ -1.07
USP16-203ENST00000399975 CCDC102BQ68D86 513 aa8.35□□□□□ -1.07
USP16-203ENST00000399975 RTKN2Q8IZC4 609 aa8.35□□□□□ -1.07
USP16-203ENST00000399975 SUPT20HQ8NEM7 779 aa8.35□□□□□ -1.07
USP16-203ENST00000399975 HELBQ8NG08 1087 aaPredicted RBP8.35□□□□□ -1.07
USP16-203ENST00000399975 PSMD1Q99460 953 aa8.35□□□□□ -1.07
USP16-203ENST00000399975 LTBP3Q9NS15 1303 aa8.35□□□□□ -1.07
USP16-203ENST00000399975 MPNDQ8N594 471 aa8.35□□□□□ -1.07
USP16-203ENST00000399975 EVI5LQ96CN4 794 aa8.35□□□□□ -1.07
USP16-203ENST00000399975 FAM84BQ96KN1 310 aaPredicted RBP8.35□□□□□ -1.07
USP16-203ENST00000399975 NEUROD6Q96NK8 337 aa8.35□□□□□ -1.07
USP16-203ENST00000399975 TMX4Q9H1E5 349 aaPredicted RBP8.35□□□□□ -1.07
USP16-203ENST00000399975 IL1R1P14778 569 aa8.34□□□□□ -1.07
USP16-203ENST00000399975 TTC39AQ5SRH9 613 aa8.34□□□□□ -1.07
USP16-203ENST00000399975 EYA3Q99504 573 aa8.34□□□□□ -1.07
USP16-203ENST00000399975 GNL3LQ9NVN8 582 aaKnown RBP8.34□□□□□ -1.07
USP16-203ENST00000399975 POLLQ9UGP5 575 aa8.34□□□□□ -1.07
USP16-203ENST00000399975 SALL1Q9NSC2 1324 aa8.34□□□□□ -1.07
USP16-203ENST00000399975 A0A0G2JLW4 131 aa8.34□□□□□ -1.07
USP16-203ENST00000399975 SDSP20132 328 aa8.34□□□□□ -1.07
USP16-203ENST00000399975 CCDC93Q567U6 631 aa8.34□□□□□ -1.07
USP16-203ENST00000399975 CAVIN4Q5BKX8 364 aa8.34□□□□□ -1.07
USP16-203ENST00000399975 CNTROBQ8N137 903 aa8.34□□□□□ -1.07
USP16-203ENST00000399975 ANKIB1Q9P2G1 1089 aa8.34□□□□□ -1.07
USP16-203ENST00000399975 DICER1Q9UPY3 1922 aaKnown RBP8.34□□□□□ -1.07
USP16-203ENST00000399975 KCNJ4P48050 445 aa8.34□□□□□ -1.08
USP16-203ENST00000399975 DALRD3Q5D0E6 543 aaKnown RBP8.34□□□□□ -1.08
USP16-203ENST00000399975 TDRD7Q8NHU6 1098 aaKnown RBP8.34□□□□□ -1.08
USP16-203ENST00000399975 SNRKQ9NRH2 765 aa8.34□□□□□ -1.08
USP16-203ENST00000399975 DENND2AQ9ULE3 1009 aa8.34□□□□□ -1.08
USP16-203ENST00000399975 CCDC88AQ3V6T2 1871 aa8.33□□□□□ -1.08
USP16-203ENST00000399975 UFL1O94874 794 aa8.33□□□□□ -1.08
USP16-203ENST00000399975 HIBADHP31937 336 aaKnown RBP8.33□□□□□ -1.08
USP16-203ENST00000399975 PHKA1P46020 1223 aa8.33□□□□□ -1.08
USP16-203ENST00000399975 TTF1Q15361 905 aaPredicted RBP8.33□□□□□ -1.08
USP16-203ENST00000399975 GORABQ5T7V8 394 aa8.33□□□□□ -1.08
USP16-203ENST00000399975 DPP8Q6V1X1 898 aaPredicted RBP8.33□□□□□ -1.08
USP16-203ENST00000399975 ZNF804AQ7Z570 1209 aa8.33□□□□□ -1.08
USP16-203ENST00000399975 COA1Q9GZY4 146 aa8.33□□□□□ -1.08
USP16-203ENST00000399975 COL1A1P02452 1464 aaPredicted RBP8.33□□□□□ -1.08
USP16-203ENST00000399975 HIP1O00291 1037 aa8.33□□□□□ -1.08
USP16-203ENST00000399975 CDC45O75419 566 aa8.33□□□□□ -1.08
USP16-203ENST00000399975 MCAMP43121 646 aa8.33□□□□□ -1.08
USP16-203ENST00000399975 FKBP1AP62942 108 aaKnown RBP8.33□□□□□ -1.08
USP16-203ENST00000399975 C8orf34Q49A92 452 aa8.33□□□□□ -1.08
USP16-203ENST00000399975 FAM205AQ6ZU69 1335 aa8.33□□□□□ -1.08
USP16-203ENST00000399975 EPB41L2O43491 1005 aaKnown RBP8.32□□□□□ -1.08
USP16-203ENST00000399975 BCAMP50895 628 aa8.32□□□□□ -1.08
USP16-203ENST00000399975 FKBP4Q02790 459 aaKnown RBP eCLIP8.32□□□□□ -1.08
USP16-203ENST00000399975 PAG1Q9NWQ8 432 aa8.32□□□□□ -1.08
USP16-203ENST00000399975 HMG20BQ9P0W2 317 aa8.32□□□□□ -1.08
USP16-203ENST00000399975 NSFL1CQ9UNZ2 370 aaKnown RBP8.32□□□□□ -1.08
USP16-203ENST00000399975 MYO5AQ9Y4I1 1855 aaKnown RBP8.32□□□□□ -1.08
USP16-203ENST00000399975 KBTBD3Q8NAB2 608 aa8.32□□□□□ -1.08
USP16-203ENST00000399975 SPATA5Q8NB90 893 aa8.32□□□□□ -1.08
USP16-203ENST00000399975 BOLA2Q9H3K6 86 aa8.32□□□□□ -1.08
USP16-203ENST00000399975 CHD4Q14839 1912 aa8.32□□□□□ -1.08
USP16-203ENST00000399975 KLRK1P26718 216 aa8.31□□□□□ -1.08
USP16-203ENST00000399975 KIAA2012Q0VF49 1180 aa8.31□□□□□ -1.08
USP16-203ENST00000399975 RASGRF1Q13972 1273 aa8.31□□□□□ -1.08
USP16-203ENST00000399975 SCARF1Q14162 830 aa8.31□□□□□ -1.08
USP16-203ENST00000399975 LRRFIP1Q32MZ4 808 aaKnown RBP8.31□□□□□ -1.08
USP16-203ENST00000399975 TSHZ3Q63HK5 1081 aa8.31□□□□□ -1.08
USP16-203ENST00000399975 WTIPA6NIX2 430 aaPredicted RBP8.31□□□□□ -1.08
USP16-203ENST00000399975 SNAP23O00161 211 aa8.31□□□□□ -1.08
USP16-203ENST00000399975 ZFYP08048 801 aaPredicted RBP8.31□□□□□ -1.08
USP16-203ENST00000399975 GYG1P46976 350 aa8.31□□□□□ -1.08
USP16-203ENST00000399975 SLC51AQ86UW1 340 aa8.31□□□□□ -1.08
USP16-203ENST00000399975 TXNRD3Q86VQ6 643 aa8.31□□□□□ -1.08
USP16-203ENST00000399975 BACH2Q9BYV9 841 aa8.31□□□□□ -1.08
USP16-203ENST00000399975 CD209Q9NNX6 404 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms