RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 RRP36Q96EU6 259 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 NBPF4Q96M43 638 aa13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 ZMYND15Q9H091 742 aa13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 ZFYP08048 801 aaPredicted RBP13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 CPLX4Q7Z7G2 160 aa13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 AOPEPQ8N6M6 819 aa13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 MRPS27Q92552 414 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 PFDN4Q9NQP4 134 aa13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 SPDYE3A6NKU9 549 aa13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 NBPF8Q3BBV2 869 aa13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 HSP90AA4PQ58FG1 418 aa13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 SEL1L2Q5TEA6 688 aa13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 SYT1P21579 422 aa13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 KRT2P35908 639 aa13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 UBXN1Q04323 297 aa13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 CLEC11AQ9Y240 323 aa13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 FAM135AQ9P2D6 1515 aa13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 ERCC6LQ2NKX8 1250 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 CCDC25Q86WR0 208 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 DHX58Q96C10 678 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 TROQ12816 1431 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 ATP5DP30049 168 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 TUBB4BP68371 445 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 CEP57Q86XR8 500 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 CCDC141Q6ZP82 1450 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 CD109Q6YHK3 1445 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 RTL1A6NKG5 1358 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 F8W031 263 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 TUBB4AP04350 444 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 GRM1Q13255 1194 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 ZNF804AQ7Z570 1209 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 NBPF11Q86T75 865 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 IFNL2Q8IZJ0 200 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 VPS52Q8N1B4 723 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 PRPF31Q8WWY3 499 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 SATB1Q01826 763 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 GEN1Q17RS7 908 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 STMN2Q93045 179 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 GTPBP4Q9BZE4 634 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 MTUS1Q9ULD2 1270 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 CCDC65Q8IXS2 484 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 IFT81Q8WYA0 676 aa13.9□□□□□ -0.18
CACNA1C-219ENST00000399649 HCLS1P14317 486 aaPredicted RBP13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 KRT79Q5XKE5 535 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 WAPLQ7Z5K2 1190 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 NME9Q86XW9 330 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 HAUS7Q99871 368 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 AKNAD1Q5T1N1 836 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 CCDC42Q96M95 316 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 AGTPBP1Q9UPW5 1226 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 CNPY2Q9Y2B0 182 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 CEP128Q6ZU80 1094 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 INTS8Q75QN2 995 aaKnown RBP13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 VPS18Q9P253 973 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 TTC21BQ7Z4L5 1316 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 LACTBP83111 547 aaPredicted RBP13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 RASA3Q14644 834 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 UBE3BQ7Z3V4 1068 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 NECAB1Q8N987 351 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 PPFIBP2Q8ND30 876 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 UBLCP1Q8WVY7 318 aaPredicted RBP13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 MAGEB6P1A0A0J9YX57 407 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 KIF3CO14782 793 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 CAPN2P17655 700 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 TNNC1P63316 161 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 TTC31Q49AM3 519 aaPredicted RBP13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 OGFOD1Q8N543 542 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 CEP120Q8N960 986 aa13.89□□□□□ -0.19
CACNA1C-219ENST00000399649 Q6ZUG5 572 aa13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 BRF1Q92994 677 aa13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 FAM184BQ9ULE4 1060 aa13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 NAA16Q6N069 864 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 HS2ST1Q7LGA3 356 aa13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 FMNL3Q8IVF7 1028 aa13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 EPSTI1Q96J88 318 aa13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 TTC36A6NLP5 189 aa13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 C16orf71Q8IYS4 520 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 E7EVH7 732 aa13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 MARCKSP29966 332 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 UAP1Q16222 522 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 KLHL40Q2TBA0 621 aa13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 ANKRD24Q8TF21 1146 aa13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 ZNF830Q96NB3 372 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 ZBTB21Q9ULJ3 1066 aa13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 PHF8Q9UPP1 1060 aa13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 EBAG9O00559 213 aa13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 RSRC1Q96IZ7 334 aaKnown RBP13.88□□□□□ -0.19
CACNA1C-219ENST00000399649 TOPBP1Q92547 1522 aa13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 CALCOCO2Q13137 446 aa13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 CEP85LQ5SZL2 805 aa13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 SWAP70Q9UH65 585 aa13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 SNRPA1P09661 255 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 KRT5P13647 590 aa13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 CALML3P27482 149 aa13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 SARNPP82979 210 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 ATP11AP98196 1134 aa13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 BMP2KLQ5H9B9 411 aa13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 NOLC1Q14978 699 aaKnown RBP eCLIP13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 INF2Q27J81 1249 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms