RNA–Protein interactions for RNA: ENST00000399621.5

CACNA1C-212, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-212ENST00000399621 DZIP3Q86Y13 1208 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 PRPF31Q8WWY3 499 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 BTG4Q9NY30 223 aa12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 SNX16P57768 344 aa12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 TTC30AQ86WT1 665 aa12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 ODF2LQ9ULJ1 636 aa12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 BIN1O00499 593 aa12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 TPD52P55327 224 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 SLFN5Q08AF3 891 aa12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 HEATR3Q7Z4Q2 680 aa12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 SELENOOQ9BVL4 669 aa12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 ANO3Q9BYT9 981 aa12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 SLC5A4Q9NY91 659 aa12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 MAP3K2Q9Y2U5 619 aa12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 CSADQ9Y600 493 aa12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 HARSP12081 509 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 SNW1Q13573 536 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 RALGAPBQ86X10 1494 aa12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 GJC1P36383 396 aa12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 PAIP2Q9BPZ3 127 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 CNBD1Q8NA66 436 aa12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 NAA25Q14CX7 972 aa12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 PTPRCP08575 1304 aa12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 FAM135AQ9P2D6 1515 aa12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 CALCOCO1Q9P1Z2 691 aa12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 SNAPC4Q5SXM2 1469 aa12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 PRPHP41219 470 aa12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 DAAM2Q86T65 1068 aa12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 RNF169Q8NCN4 708 aa12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 FBF1Q8TES7 1133 aa12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 HOOK2Q96ED9 719 aa12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 NKTRP30414 1462 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 ABCC11Q96J66 1382 aa12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 DNMBPQ6XZF7 1577 aa12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 SPDYE3A6NKU9 549 aa12.53□□□□□ -0.4
CACNA1C-212ENST00000399621 HS1BP3Q53T59 392 aa12.52□□□□□ -0.4
CACNA1C-212ENST00000399621 GADL1Q6ZQY3 521 aa12.52□□□□□ -0.4
CACNA1C-212ENST00000399621 DBF4Q9UBU7 674 aaPredicted RBP12.52□□□□□ -0.4
CACNA1C-212ENST00000399621 UQCRFS1P1P0C7P4 283 aa12.52□□□□□ -0.41
CACNA1C-212ENST00000399621 STAT6P42226 847 aa12.52□□□□□ -0.41
CACNA1C-212ENST00000399621 RRAGBQ5VZM2 374 aa12.52□□□□□ -0.41
CACNA1C-212ENST00000399621 RXRBP28702 533 aa12.52□□□□□ -0.41
CACNA1C-212ENST00000399621 GSTA5Q7RTV2 222 aa12.52□□□□□ -0.41
CACNA1C-212ENST00000399621 PAGR1Q9BTK6 254 aa12.52□□□□□ -0.41
CACNA1C-212ENST00000399621 C6orf50Q9HD87 102 aa12.52□□□□□ -0.41
CACNA1C-212ENST00000399621 ANAPC4Q9UJX5 808 aa12.52□□□□□ -0.41
CACNA1C-212ENST00000399621 SATB1Q01826 763 aa12.52□□□□□ -0.41
CACNA1C-212ENST00000399621 NAA16Q6N069 864 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-212ENST00000399621 NME9Q86XW9 330 aa12.52□□□□□ -0.41
CACNA1C-212ENST00000399621 CCDC63Q8NA47 563 aa12.52□□□□□ -0.41
CACNA1C-212ENST00000399621 KRT23Q9C075 422 aa12.52□□□□□ -0.41
CACNA1C-212ENST00000399621 CCDC102BQ68D86 513 aa12.52□□□□□ -0.41
CACNA1C-212ENST00000399621 CTAGE1Q96RT6 745 aa12.52□□□□□ -0.41
CACNA1C-212ENST00000399621 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.52□□□□□ -0.41
CACNA1C-212ENST00000399621 V9GYY5 206 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-212ENST00000399621 TROQ12816 1431 aaPredicted RBP12.51□□□□□ -0.41
CACNA1C-212ENST00000399621 STMN4Q9H169 189 aaPredicted RBP12.51□□□□□ -0.41
CACNA1C-212ENST00000399621 THUMPD2Q9BTF0 503 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-212ENST00000399621 ISM2Q6H9L7 571 aa12.51□□□□□ -0.41
CACNA1C-212ENST00000399621 MICU3Q86XE3 530 aa12.51□□□□□ -0.41
CACNA1C-212ENST00000399621 GOLGA1Q92805 767 aa12.51□□□□□ -0.41
CACNA1C-212ENST00000399621 C16orf45Q96MC5 204 aaPredicted RBP12.51□□□□□ -0.41
CACNA1C-212ENST00000399621 IL2RBP14784 551 aa12.51□□□□□ -0.41
CACNA1C-212ENST00000399621 NEK1Q96PY6 1258 aa12.51□□□□□ -0.41
CACNA1C-212ENST00000399621 SH2D4AQ9H788 454 aa12.51□□□□□ -0.41
CACNA1C-212ENST00000399621 ORC3Q9UBD5 711 aaPredicted RBP12.51□□□□□ -0.41
CACNA1C-212ENST00000399621 MAP7D1Q3KQU3 841 aa12.51□□□□□ -0.41
CACNA1C-212ENST00000399621 IFIT1BQ5T764 474 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-212ENST00000399621 PANK2Q9BZ23 570 aa12.51□□□□□ -0.41
CACNA1C-212ENST00000399621 HMG20BQ9P0W2 317 aa12.51□□□□□ -0.41
CACNA1C-212ENST00000399621 TMEM110-MUSTN1A8MSY1 372 aa12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 UFL1O94874 794 aa12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 WTAPQ15007 396 aa12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 SUPT20HQ8NEM7 779 aa12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 F6X3S4 739 aa12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 CEP135Q66GS9 1140 aa12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 RPUSD2Q8IZ73 545 aaKnown RBP12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 FAM193BQ96PV7 902 aaPredicted RBP12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 ARHGEF12Q9NZN5 1544 aa12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 FAM13AO94988 1023 aa12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 SNRPA1P09661 255 aaKnown RBP12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 CYLC1P35663 651 aaPredicted RBP12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 SLC4A4Q9Y6R1 1079 aa12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 PTPDC1A2A3K4 754 aa12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 PDE6BP35913 854 aa12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 HAND2P61296 217 aa12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 CCDC6Q16204 474 aa12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 RAB11FIP4Q86YS3 637 aa12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 CCDC77Q9BR77 488 aa12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 USP25Q9UHP3 1055 aa12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 SAP30BPQ9UHR5 308 aaKnown RBP12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 STK24Q9Y6E0 443 aa12.5□□□□□ -0.41
CACNA1C-212ENST00000399621 N4BP3O15049 544 aa12.49□□□□□ -0.41
CACNA1C-212ENST00000399621 ABL1P00519 1130 aa12.49□□□□□ -0.41
CACNA1C-212ENST00000399621 NBPF7P0C2Y1 421 aaPredicted RBP12.49□□□□□ -0.41
CACNA1C-212ENST00000399621 CHST3Q7LGC8 479 aa12.49□□□□□ -0.41
CACNA1C-212ENST00000399621 LARP6Q9BRS8 491 aaKnown RBP12.49□□□□□ -0.41
CACNA1C-212ENST00000399621 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms