RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 TBC1D32Q96NH3 1257 aa12.47□□□□□ -0.41
CACNA1C-210ENST00000399606 MAGEB6P1A0A0J9YX57 407 aa12.46□□□□□ -0.41
CACNA1C-210ENST00000399606 FILIP1Q7Z7B0 1213 aa12.46□□□□□ -0.41
CACNA1C-210ENST00000399606 SLC26A6Q9BXS9 759 aa12.46□□□□□ -0.41
CACNA1C-210ENST00000399606 TNRQ92752 1358 aa12.46□□□□□ -0.41
CACNA1C-210ENST00000399606 DYNC1I1O14576 645 aa12.46□□□□□ -0.41
CACNA1C-210ENST00000399606 POLR3GO15318 223 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-210ENST00000399606 PLCG2P16885 1265 aa12.46□□□□□ -0.41
CACNA1C-210ENST00000399606 C9orf84Q5VXU9 1444 aa12.46□□□□□ -0.41
CACNA1C-210ENST00000399606 ZSCAN31Q96LW9 406 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-210ENST00000399606 DISP3Q9P2K9 1392 aa12.46□□□□□ -0.41
CACNA1C-210ENST00000399606 TMEM110-MUSTN1A8MSY1 372 aa12.46□□□□□ -0.41
CACNA1C-210ENST00000399606 GLRX3O76003 335 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-210ENST00000399606 PPP1R9BQ96SB3 815 aa12.46□□□□□ -0.41
CACNA1C-210ENST00000399606 TAOK3Q9H2K8 898 aa12.46□□□□□ -0.41
CACNA1C-210ENST00000399606 QTRT2Q9H974 415 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-210ENST00000399606 ZBED4O75132 1171 aa12.46□□□□□ -0.42
CACNA1C-210ENST00000399606 RAB11FIP3O75154 756 aa12.46□□□□□ -0.42
CACNA1C-210ENST00000399606 CUL4BQ13620 913 aa12.46□□□□□ -0.42
CACNA1C-210ENST00000399606 ZNF772Q68DY9 489 aaPredicted RBP12.46□□□□□ -0.42
CACNA1C-210ENST00000399606 NUP160Q12769 1436 aa12.46□□□□□ -0.42
CACNA1C-210ENST00000399606 KIF2AO00139 706 aaPredicted RBP12.46□□□□□ -0.42
CACNA1C-210ENST00000399606 UBA7P41226 1012 aa12.46□□□□□ -0.42
CACNA1C-210ENST00000399606 LRRC27Q9C0I9 530 aa12.46□□□□□ -0.42
CACNA1C-210ENST00000399606 ATF5Q9Y2D1 282 aaPredicted RBP12.46□□□□□ -0.42
CACNA1C-210ENST00000399606 FSD2A1L4K1 749 aa12.45□□□□□ -0.42
CACNA1C-210ENST00000399606 RASA3Q14644 834 aa12.45□□□□□ -0.42
CACNA1C-210ENST00000399606 MICU3Q86XE3 530 aa12.45□□□□□ -0.42
CACNA1C-210ENST00000399606 ANKRD2Q9GZV1 360 aa12.45□□□□□ -0.42
CACNA1C-210ENST00000399606 EXOC1Q9NV70 894 aa12.45□□□□□ -0.42
CACNA1C-210ENST00000399606 CAMSAP2Q08AD1 1489 aa12.45□□□□□ -0.42
CACNA1C-210ENST00000399606 NBPF1Q3BBV0 1214 aa12.45□□□□□ -0.42
CACNA1C-210ENST00000399606 NUP88Q99567 741 aaPredicted RBP12.45□□□□□ -0.42
CACNA1C-210ENST00000399606 CCDC141Q6ZP82 1450 aa12.45□□□□□ -0.42
CACNA1C-210ENST00000399606 ABCC5O15440 1437 aa12.45□□□□□ -0.42
CACNA1C-210ENST00000399606 HACE1Q8IYU2 909 aa12.45□□□□□ -0.42
CACNA1C-210ENST00000399606 ZBED2Q9BTP6 218 aa12.45□□□□□ -0.42
CACNA1C-210ENST00000399606 CGNQ9P2M7 1197 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-210ENST00000399606 WASLO00401 505 aaPredicted RBP12.45□□□□□ -0.42
CACNA1C-210ENST00000399606 SLC39A6Q13433 755 aa12.45□□□□□ -0.42
CACNA1C-210ENST00000399606 MSANTD4Q8NCY6 345 aa12.45□□□□□ -0.42
CACNA1C-210ENST00000399606 MICAL1Q8TDZ2 1067 aa12.45□□□□□ -0.42
CACNA1C-210ENST00000399606 SMARCA5O60264 1052 aaPredicted RBP12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 ERCC5P28715 1186 aaPredicted RBP12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 PTPN14Q15678 1187 aa12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 MAFGO15525 162 aa12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 ARID4AP29374 1257 aaPredicted RBP12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 MCM9Q9NXL9 1143 aa12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 CALCOCO1Q9P1Z2 691 aa12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 LRFN2Q9ULH4 789 aa12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 PPME1Q9Y570 386 aa12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 TOPBP1Q92547 1522 aa12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 C8orf34Q49A92 452 aa12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 SPECC1LQ69YQ0 1117 aa12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 RRP36Q96EU6 259 aaKnown RBP12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 AZI2Q9H6S1 392 aa12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 CACYBPQ9HB71 228 aaKnown RBP12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 F6X3S4 739 aa12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 CCDC129Q6ZRS4 1044 aa12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 GGA1Q9UJY5 639 aa12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 LCA5Q86VQ0 697 aa12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 CCDC24Q8N4L8 307 aa12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.44□□□□□ -0.42
CACNA1C-210ENST00000399606 CCDC83Q8IWF9 413 aa12.43□□□□□ -0.42
CACNA1C-210ENST00000399606 CCDC63Q8NA47 563 aa12.43□□□□□ -0.42
CACNA1C-210ENST00000399606 FEZ2Q9UHY8 353 aaPredicted RBP12.43□□□□□ -0.42
CACNA1C-210ENST00000399606 PALM3A6NDB9 673 aaPredicted RBP12.43□□□□□ -0.42
CACNA1C-210ENST00000399606 DAPK3O43293 454 aa12.43□□□□□ -0.42
CACNA1C-210ENST00000399606 CRCPO75575 148 aa12.43□□□□□ -0.42
CACNA1C-210ENST00000399606 WTAPQ15007 396 aa12.43□□□□□ -0.42
CACNA1C-210ENST00000399606 MAP3K11Q16584 847 aa12.43□□□□□ -0.42
CACNA1C-210ENST00000399606 KIF4BQ2VIQ3 1234 aa12.43□□□□□ -0.42
CACNA1C-210ENST00000399606 USO1O60763 962 aaKnown RBP12.43□□□□□ -0.42
CACNA1C-210ENST00000399606 TCP10Q12799 353 aa12.43□□□□□ -0.42
CACNA1C-210ENST00000399606 USP48Q86UV5 1035 aa12.43□□□□□ -0.42
CACNA1C-210ENST00000399606 PFDN4Q9NQP4 134 aa12.43□□□□□ -0.42
CACNA1C-210ENST00000399606 UHRF1BP1Q6BDS2 1440 aa12.43□□□□□ -0.42
CACNA1C-210ENST00000399606 TBC1D2Q9BYX2 928 aa12.43□□□□□ -0.42
CACNA1C-210ENST00000399606 SEPT14Q6ZU15 432 aa12.43□□□□□ -0.42
CACNA1C-210ENST00000399606 CCDC89Q8N998 374 aa12.43□□□□□ -0.42
CACNA1C-210ENST00000399606 ADGRL1O94910 1474 aa12.43□□□□□ -0.42
CACNA1C-210ENST00000399606 PAFAH1B1P43034 410 aa12.42□□□□□ -0.42
CACNA1C-210ENST00000399606 METAP2P50579 478 aaKnown RBP eCLIP12.42□□□□□ -0.42
CACNA1C-210ENST00000399606 MAK16Q9BXY0 300 aaKnown RBP12.42□□□□□ -0.42
CACNA1C-210ENST00000399606 CCDC14Q49A88 953 aa12.42□□□□□ -0.42
CACNA1C-210ENST00000399606 CPXCR1Q8N123 301 aa12.42□□□□□ -0.42
CACNA1C-210ENST00000399606 CNNM3Q8NE01 707 aa12.42□□□□□ -0.42
CACNA1C-210ENST00000399606 NSD3Q9BZ95 1437 aa12.42□□□□□ -0.42
CACNA1C-210ENST00000399606 POTEB2H3BUK9 544 aa12.42□□□□□ -0.42
CACNA1C-210ENST00000399606 DLGAP5Q15398 846 aa12.42□□□□□ -0.42
CACNA1C-210ENST00000399606 CTR9Q6PD62 1173 aa12.42□□□□□ -0.42
CACNA1C-210ENST00000399606 CCT6BQ92526 530 aa12.42□□□□□ -0.42
CACNA1C-210ENST00000399606 TTC12Q9H892 705 aaPredicted RBP12.42□□□□□ -0.42
CACNA1C-210ENST00000399606 NESP48681 1621 aa12.42□□□□□ -0.42
CACNA1C-210ENST00000399606 PANK2Q9BZ23 570 aa12.42□□□□□ -0.42
CACNA1C-210ENST00000399606 URI1O94763 535 aaPredicted RBP12.42□□□□□ -0.42
CACNA1C-210ENST00000399606 CAMK4Q16566 473 aa12.42□□□□□ -0.42
CACNA1C-210ENST00000399606 SNX21Q969T3 373 aa12.42□□□□□ -0.42
CACNA1C-210ENST00000399606 NAA15Q9BXJ9 866 aaKnown RBP12.42□□□□□ -0.42
CACNA1C-210ENST00000399606 CHMP2AO43633 222 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms