RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 XAGE2Q96GT9 111 aa27.2■■□□□ 1.94
RABGGTA-202ENST00000399409 TPM3P06753 285 aa27.19■■□□□ 1.94
RABGGTA-202ENST00000399409 TYRO3Q06418 890 aa27.19■■□□□ 1.94
RABGGTA-202ENST00000399409 APOBRQ0VD83 1088 aa27.19■■□□□ 1.94
RABGGTA-202ENST00000399409 ATL3Q6DD88 541 aa27.19■■□□□ 1.94
RABGGTA-202ENST00000399409 M0R2C6 588 aa27.19■■□□□ 1.94
RABGGTA-202ENST00000399409 TAF7LQ5H9L4 462 aa27.19■■□□□ 1.94
RABGGTA-202ENST00000399409 R3HCC1Q9Y3T6 440 aaKnown RBP27.19■■□□□ 1.94
RABGGTA-202ENST00000399409 CDHR2Q9BYE9 1310 aa27.19■■□□□ 1.94
RABGGTA-202ENST00000399409 IFIT5Q13325 482 aaKnown RBP27.18■■□□□ 1.94
RABGGTA-202ENST00000399409 PTPDC1A2A3K4 754 aa27.18■■□□□ 1.94
RABGGTA-202ENST00000399409 FKBP4Q02790 459 aaKnown RBP eCLIP27.18■■□□□ 1.94
RABGGTA-202ENST00000399409 MRVI1Q9Y6F6 885 aa27.18■■□□□ 1.94
RABGGTA-202ENST00000399409 DNAJC10Q8IXB1 793 aa27.17■■□□□ 1.94
RABGGTA-202ENST00000399409 BICD2Q8TD16 824 aa27.17■■□□□ 1.94
RABGGTA-202ENST00000399409 OSBP2Q969R2 916 aa27.17■■□□□ 1.94
RABGGTA-202ENST00000399409 PGBD1Q96JS3 809 aa27.17■■□□□ 1.94
RABGGTA-202ENST00000399409 CTDNEP1O95476 244 aa27.16■■□□□ 1.94
RABGGTA-202ENST00000399409 MAP3K15Q6ZN16 1313 aa27.16■■□□□ 1.94
RABGGTA-202ENST00000399409 CAMK4Q16566 473 aa27.16■■□□□ 1.94
RABGGTA-202ENST00000399409 HSP90AB3PQ58FF7 597 aa27.16■■□□□ 1.94
RABGGTA-202ENST00000399409 ADORA1P30542 326 aa27.15■■□□□ 1.94
RABGGTA-202ENST00000399409 EVCP57679 992 aa27.15■■□□□ 1.94
RABGGTA-202ENST00000399409 GIGYF2Q6Y7W6 1299 aaKnown RBP27.15■■□□□ 1.94
RABGGTA-202ENST00000399409 PIBF1Q8WXW3 757 aa27.15■■□□□ 1.94
RABGGTA-202ENST00000399409 PIGBQ92521 554 aa27.15■■□□□ 1.94
RABGGTA-202ENST00000399409 ZNF330Q9Y3S2 320 aaPredicted RBP27.15■■□□□ 1.94
RABGGTA-202ENST00000399409 SALL1Q9NSC2 1324 aa27.15■■□□□ 1.94
RABGGTA-202ENST00000399409 PDIA3P30101 505 aaKnown RBP27.15■■□□□ 1.94
RABGGTA-202ENST00000399409 FAM89AQ96GI7 184 aa27.15■■□□□ 1.94
RABGGTA-202ENST00000399409 RRP9O43818 475 aaKnown RBP27.14■■□□□ 1.94
RABGGTA-202ENST00000399409 IMMTQ16891 758 aaKnown RBP27.14■■□□□ 1.94
RABGGTA-202ENST00000399409 ZNF396Q96N95 335 aaPredicted RBP27.14■■□□□ 1.94
RABGGTA-202ENST00000399409 ASAP1Q9ULH1 1129 aa27.14■■□□□ 1.94
RABGGTA-202ENST00000399409 APPBP2Q92624 585 aa27.14■■□□□ 1.93
RABGGTA-202ENST00000399409 RCOR1Q9UKL0 485 aa27.14■■□□□ 1.93
RABGGTA-202ENST00000399409 GOLGA6L6A8MZA4 724 aa27.13■■□□□ 1.93
RABGGTA-202ENST00000399409 WASHC4Q2M389 1173 aa27.13■■□□□ 1.93
RABGGTA-202ENST00000399409 CAVIN2O95810 425 aa27.13■■□□□ 1.93
RABGGTA-202ENST00000399409 ADD1P35611 737 aaKnown RBP27.13■■□□□ 1.93
RABGGTA-202ENST00000399409 PLCB2Q00722 1185 aa27.13■■□□□ 1.93
RABGGTA-202ENST00000399409 MYH15Q9Y2K3 1946 aa27.12■■□□□ 1.93
RABGGTA-202ENST00000399409 A0A0G2JLW4 131 aa27.11■■□□□ 1.93
RABGGTA-202ENST00000399409 AP5Z1O43299 807 aa27.11■■□□□ 1.93
RABGGTA-202ENST00000399409 NR1I2O75469 434 aa27.11■■□□□ 1.93
RABGGTA-202ENST00000399409 CCT2P78371 535 aaKnown RBP27.11■■□□□ 1.93
RABGGTA-202ENST00000399409 SASS6Q6UVJ0 657 aa27.11■■□□□ 1.93
RABGGTA-202ENST00000399409 CKAP2LQ8IYA6 745 aa27.11■■□□□ 1.93
RABGGTA-202ENST00000399409 NHSL1Q5SYE7 1610 aa27.11■■□□□ 1.93
RABGGTA-202ENST00000399409 ATP2B3Q16720 1220 aa27.11■■□□□ 1.93
RABGGTA-202ENST00000399409 TTLL5Q6EMB2 1281 aa27.11■■□□□ 1.93
RABGGTA-202ENST00000399409 ZNF512BQ96KM6 892 aaPredicted RBP27.11■■□□□ 1.93
RABGGTA-202ENST00000399409 RIC1Q4ADV7 1423 aa27.1■■□□□ 1.93
RABGGTA-202ENST00000399409 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.1■■□□□ 1.935e-6■■■■■ 34.6
RABGGTA-202ENST00000399409 RIPOR2Q9Y4F9 1068 aa27.1■■□□□ 1.93
RABGGTA-202ENST00000399409 CTAGE5O15320 804 aa27.1■■□□□ 1.93
RABGGTA-202ENST00000399409 ZAP70P43403 619 aa27.1■■□□□ 1.93
RABGGTA-202ENST00000399409 ZSCAN25Q6NSZ9 544 aa27.1■■□□□ 1.93
RABGGTA-202ENST00000399409 NLRP10Q86W26 655 aa27.1■■□□□ 1.93
RABGGTA-202ENST00000399409 STRCQ7RTU9 1775 aa27.1■■□□□ 1.93
RABGGTA-202ENST00000399409 ANO6Q4KMQ2 910 aa27.09■■□□□ 1.93
RABGGTA-202ENST00000399409 METTL24Q5JXM2 366 aa27.09■■□□□ 1.93
RABGGTA-202ENST00000399409 NAP1L2Q9ULW6 460 aaPredicted RBP27.09■■□□□ 1.93
RABGGTA-202ENST00000399409 WDR19Q8NEZ3 1342 aa27.09■■□□□ 1.93
RABGGTA-202ENST00000399409 ZNF830Q96NB3 372 aaPredicted RBP27.09■■□□□ 1.93
RABGGTA-202ENST00000399409 TTC12Q9H892 705 aaPredicted RBP27.09■■□□□ 1.93
RABGGTA-202ENST00000399409 CBX8Q9HC52 389 aa27.09■■□□□ 1.93
RABGGTA-202ENST00000399409 FOXP2O15409 715 aa27.08■■□□□ 1.93
RABGGTA-202ENST00000399409 NOLC1Q14978 699 aaKnown RBP eCLIP27.08■■□□□ 1.93
RABGGTA-202ENST00000399409 TTLL11Q8NHH1 800 aa27.08■■□□□ 1.93
RABGGTA-202ENST00000399409 NCOA5Q9HCD5 579 aaKnown RBP27.08■■□□□ 1.93
RABGGTA-202ENST00000399409 ANKRD18BA2A2Z9 1011 aa27.07■■□□□ 1.92
RABGGTA-202ENST00000399409 DHX16O60231 1041 aaKnown RBP27.07■■□□□ 1.92
RABGGTA-202ENST00000399409 FGAP02671 866 aa27.07■■□□□ 1.92
RABGGTA-202ENST00000399409 SCARF1Q14162 830 aa27.07■■□□□ 1.92
RABGGTA-202ENST00000399409 HSP90AA2PQ14568 343 aaPredicted RBP27.07■■□□□ 1.92
RABGGTA-202ENST00000399409 CCDC85AQ96PX6 553 aaPredicted RBP27.07■■□□□ 1.92
RABGGTA-202ENST00000399409 NWD2Q9ULI1 1742 aa27.07■■□□□ 1.92
RABGGTA-202ENST00000399409 CARMIL3Q8ND23 1372 aa27.07■■□□□ 1.92
RABGGTA-202ENST00000399409 CTSWP56202 376 aa27.07■■□□□ 1.92
RABGGTA-202ENST00000399409 LDHAL6AQ6ZMR3 332 aa27.07■■□□□ 1.92
RABGGTA-202ENST00000399409 SPTLC3Q9NUV7 552 aa27.07■■□□□ 1.92
RABGGTA-202ENST00000399409 ITGB4P16144 1822 aa27.07■■□□□ 1.92
RABGGTA-202ENST00000399409 ZNF335Q9H4Z2 1342 aaPredicted RBP27.07■■□□□ 1.92
RABGGTA-202ENST00000399409 ITGA6P23229 1130 aa27.06■■□□□ 1.92
RABGGTA-202ENST00000399409 TTF1Q15361 905 aaPredicted RBP27.06■■□□□ 1.92
RABGGTA-202ENST00000399409 TDRD7Q8NHU6 1098 aaKnown RBP27.06■■□□□ 1.92
RABGGTA-202ENST00000399409 CHST3Q7LGC8 479 aa27.06■■□□□ 1.92
RABGGTA-202ENST00000399409 MB21D2Q8IYB1 491 aaPredicted RBP27.06■■□□□ 1.92
RABGGTA-202ENST00000399409 MPNDQ8N594 471 aa27.06■■□□□ 1.92
RABGGTA-202ENST00000399409 NCOA7Q8NI08 942 aa27.06■■□□□ 1.92
RABGGTA-202ENST00000399409 MYH7P12883 1935 aa27.06■■□□□ 1.92
RABGGTA-202ENST00000399409 LRP6O75581 1613 aa27.06■■□□□ 1.92
RABGGTA-202ENST00000399409 ANKRD36CQ5JPF3 1778 aa27.05■■□□□ 1.92
RABGGTA-202ENST00000399409 HLFQ16534 295 aa27.05■■□□□ 1.92
RABGGTA-202ENST00000399409 LUZP1Q86V48 1076 aa27.05■■□□□ 1.92
RABGGTA-202ENST00000399409 BCL9O00512 1426 aa27.05■■□□□ 1.92
RABGGTA-202ENST00000399409 PRC1O43663 620 aa27.05■■□□□ 1.92
RABGGTA-202ENST00000399409 CYP19A1P11511 503 aaPredicted RBP27.05■■□□□ 1.92
RABGGTA-202ENST00000399409 CCAR1Q8IX12 1150 aaKnown RBP27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms