RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 MCM4P33991 863 aa11.35□□□□□ -0.59
LINC00243-201ENST00000399196 TTC39AQ5SRH9 613 aa11.35□□□□□ -0.59
LINC00243-201ENST00000399196 PRPF40BQ6NWY9 871 aaKnown RBP11.35□□□□□ -0.59
LINC00243-201ENST00000399196 COL23A1Q86Y22 540 aaPredicted RBP11.35□□□□□ -0.59
LINC00243-201ENST00000399196 IFNLR1Q8IU57 520 aaPredicted RBP11.35□□□□□ -0.59
LINC00243-201ENST00000399196 MAP4K1Q92918 833 aa11.35□□□□□ -0.59
LINC00243-201ENST00000399196 KCNB2Q92953 911 aa11.35□□□□□ -0.59
LINC00243-201ENST00000399196 XAGE2Q96GT9 111 aa11.35□□□□□ -0.59
LINC00243-201ENST00000399196 TTC14Q96N46 770 aa11.35□□□□□ -0.59
LINC00243-201ENST00000399196 CDC5LQ99459 802 aaKnown RBP11.35□□□□□ -0.59
LINC00243-201ENST00000399196 CIZ1Q9ULV3 898 aaPredicted RBP11.35□□□□□ -0.59
LINC00243-201ENST00000399196 MROH5Q6ZUA9 1318 aa11.35□□□□□ -0.59
LINC00243-201ENST00000399196 MYO5AQ9Y4I1 1855 aaKnown RBP11.34□□□□□ -0.59
LINC00243-201ENST00000399196 IFIT1P09914 478 aaKnown RBP11.34□□□□□ -0.59
LINC00243-201ENST00000399196 SCARF1Q14162 830 aa11.34□□□□□ -0.59
LINC00243-201ENST00000399196 CCDC129Q6ZRS4 1044 aa11.34□□□□□ -0.59
LINC00243-201ENST00000399196 DHX37Q8IY37 1157 aaKnown RBP11.34□□□□□ -0.59
LINC00243-201ENST00000399196 VGLL2Q8N8G2 317 aa11.34□□□□□ -0.59
LINC00243-201ENST00000399196 PDGFDQ9GZP0 370 aaPredicted RBP11.34□□□□□ -0.59
LINC00243-201ENST00000399196 RBM8AQ9Y5S9 174 aaKnown RBP11.34□□□□□ -0.59
LINC00243-201ENST00000399196 RTL9Q8NET4 1388 aa11.34□□□□□ -0.59
LINC00243-201ENST00000399196 GOLIM4O00461 696 aa11.34□□□□□ -0.59
LINC00243-201ENST00000399196 PDE8BO95263 885 aa11.34□□□□□ -0.59
LINC00243-201ENST00000399196 SLC15A2Q16348 729 aa11.34□□□□□ -0.59
LINC00243-201ENST00000399196 UBE2Q2Q8WVN8 375 aa11.34□□□□□ -0.59
LINC00243-201ENST00000399196 NLRP3Q96P20 1036 aa11.34□□□□□ -0.59
LINC00243-201ENST00000399196 LARP6Q9BRS8 491 aaKnown RBP11.34□□□□□ -0.59
LINC00243-201ENST00000399196 COL24A1Q17RW2 1714 aa11.34□□□□□ -0.59
LINC00243-201ENST00000399196 QSER1Q2KHR3 1735 aa11.34□□□□□ -0.59
LINC00243-201ENST00000399196 TAF1P21675 1872 aa11.34□□□□□ -0.59
LINC00243-201ENST00000399196 LRP5O75197 1615 aa11.33□□□□□ -0.59
LINC00243-201ENST00000399196 CASZ1Q86V15 1759 aa11.33□□□□□ -0.59
LINC00243-201ENST00000399196 TAF5LO75529 589 aa11.33□□□□□ -0.6
LINC00243-201ENST00000399196 CYP2E1P05181 493 aaPredicted RBP11.33□□□□□ -0.6
LINC00243-201ENST00000399196 CUL4AQ13619 759 aa11.33□□□□□ -0.6
LINC00243-201ENST00000399196 KBTBD3Q8NAB2 608 aa11.33□□□□□ -0.6
LINC00243-201ENST00000399196 HELBQ8NG08 1087 aaPredicted RBP11.33□□□□□ -0.6
LINC00243-201ENST00000399196 PAG1Q9NWQ8 432 aa11.33□□□□□ -0.6
LINC00243-201ENST00000399196 ZDHHC9Q9Y397 364 aa11.33□□□□□ -0.6
LINC00243-201ENST00000399196 LAMB2P55268 1798 aa11.33□□□□□ -0.6
LINC00243-201ENST00000399196 SPEF2Q9C093 1822 aa11.33□□□□□ -0.6
LINC00243-201ENST00000399196 CARMIL3Q8ND23 1372 aa11.33□□□□□ -0.6
LINC00243-201ENST00000399196 GYS1P13807 737 aa11.32□□□□□ -0.6
LINC00243-201ENST00000399196 SF3B3Q15393 1217 aaKnown RBP11.32□□□□□ -0.6
LINC00243-201ENST00000399196 PUM3Q15397 648 aaKnown RBP11.32□□□□□ -0.6
LINC00243-201ENST00000399196 SLC10A5Q5PT55 438 aa11.32□□□□□ -0.6
LINC00243-201ENST00000399196 CREB3L3Q68CJ9 461 aa11.32□□□□□ -0.6
LINC00243-201ENST00000399196 PI16Q6UXB8 463 aa11.32□□□□□ -0.6
LINC00243-201ENST00000399196 ANKRD18AQ8IVF6 992 aa11.32□□□□□ -0.6
LINC00243-201ENST00000399196 ABCC12Q96J65 1359 aa11.32□□□□□ -0.6
LINC00243-201ENST00000399196 SNAP23O00161 211 aa11.32□□□□□ -0.6
LINC00243-201ENST00000399196 SLC27A2O14975 620 aa11.32□□□□□ -0.6
LINC00243-201ENST00000399196 AK2P54819 239 aa11.32□□□□□ -0.6
LINC00243-201ENST00000399196 FKBP4Q02790 459 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC00243-201ENST00000399196 NFIXQ14938 502 aa11.32□□□□□ -0.6
LINC00243-201ENST00000399196 C3orf67Q6ZVT6 689 aa11.32□□□□□ -0.6
LINC00243-201ENST00000399196 CCDC24Q8N4L8 307 aa11.32□□□□□ -0.6
LINC00243-201ENST00000399196 CNBD1Q8NA66 436 aa11.32□□□□□ -0.6
LINC00243-201ENST00000399196 LPIN2Q92539 896 aa11.32□□□□□ -0.6
LINC00243-201ENST00000399196 LARGE1O95461 756 aa11.31□□□□□ -0.6
LINC00243-201ENST00000399196 SLC5A1P13866 664 aa11.31□□□□□ -0.6
LINC00243-201ENST00000399196 CASTP20810 708 aaKnown RBP11.31□□□□□ -0.6
LINC00243-201ENST00000399196 RUFY3Q7L099 469 aa11.31□□□□□ -0.6
LINC00243-201ENST00000399196 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINC00243-201ENST00000399196 STK32BQ9NY57 414 aa11.31□□□□□ -0.6
LINC00243-201ENST00000399196 RFX7Q2KHR2 1363 aa11.31□□□□□ -0.6
LINC00243-201ENST00000399196 DTNBO60941 627 aa11.31□□□□□ -0.6
LINC00243-201ENST00000399196 VPS53Q5VIR6 699 aa11.31□□□□□ -0.6
LINC00243-201ENST00000399196 CHAMP1Q96JM3 812 aa11.31□□□□□ -0.6
LINC00243-201ENST00000399196 JAKMIP1Q96N16 626 aaKnown RBP11.31□□□□□ -0.6
LINC00243-201ENST00000399196 RPAP1Q9BWH6 1393 aaPredicted RBP11.3□□□□□ -0.6
LINC00243-201ENST00000399196 A0A0G2JLW4 131 aa11.3□□□□□ -0.6
LINC00243-201ENST00000399196 KCNJ4P48050 445 aa11.3□□□□□ -0.6
LINC00243-201ENST00000399196 ZSWIM6Q9HCJ5 1215 aa11.3□□□□□ -0.6
LINC00243-201ENST00000399196 MYH7P12883 1935 aa11.3□□□□□ -0.6
LINC00243-201ENST00000399196 ZAP70P43403 619 aa11.29□□□□□ -0.6
LINC00243-201ENST00000399196 MCM2P49736 904 aa11.29□□□□□ -0.6
LINC00243-201ENST00000399196 CHRNDQ07001 517 aa11.29□□□□□ -0.6
LINC00243-201ENST00000399196 ST3GAL1Q11201 340 aa11.29□□□□□ -0.6
LINC00243-201ENST00000399196 LRRFIP1Q32MZ4 808 aaKnown RBP11.29□□□□□ -0.6
LINC00243-201ENST00000399196 ZMYM1Q5SVZ6 1142 aa11.29□□□□□ -0.6
LINC00243-201ENST00000399196 BSDC1Q9NW68 430 aaPredicted RBP11.29□□□□□ -0.6
LINC00243-201ENST00000399196 LAMA4Q16363 1823 aa11.29□□□□□ -0.6
LINC00243-201ENST00000399196 MCAMP43121 646 aa11.29□□□□□ -0.6
LINC00243-201ENST00000399196 DDR1Q08345 913 aa11.29□□□□□ -0.6
LINC00243-201ENST00000399196 GSE1Q14687 1217 aa11.29□□□□□ -0.6
LINC00243-201ENST00000399196 MCMDC2Q4G0Z9 681 aa11.29□□□□□ -0.6
LINC00243-201ENST00000399196 MSL1Q68DK7 614 aa11.29□□□□□ -0.6
LINC00243-201ENST00000399196 TCEANC2Q96MN5 208 aa11.29□□□□□ -0.6
LINC00243-201ENST00000399196 FOXP2O15409 715 aa11.28□□□□□ -0.6
LINC00243-201ENST00000399196 MAST3O60307 1309 aa11.28□□□□□ -0.6
LINC00243-201ENST00000399196 HMGB1P09429 215 aaKnown RBP11.28□□□□□ -0.6
LINC00243-201ENST00000399196 UQCRFS1P1P0C7P4 283 aa11.28□□□□□ -0.6
LINC00243-201ENST00000399196 FGFR2P21802 821 aa11.28□□□□□ -0.6
LINC00243-201ENST00000399196 ST5P78524 1137 aa11.28□□□□□ -0.6
LINC00243-201ENST00000399196 CCDC102BQ68D86 513 aa11.28□□□□□ -0.6
LINC00243-201ENST00000399196 CLEC17AQ6ZS10 378 aa11.28□□□□□ -0.6
LINC00243-201ENST00000399196 ARAP2Q8WZ64 1704 aa11.28□□□□□ -0.6
LINC00243-201ENST00000399196 CELF1Q92879 486 aaKnown RBP11.28□□□□□ -0.6
LINC00243-201ENST00000399196 OSBP2Q969R2 916 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms