RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 MCM9Q9NXL9 1143 aa13.27□□□□□ -0.29
PCDHGA8-201ENST00000398604 PUF60Q9UHX1 559 aaKnown RBP13.27□□□□□ -0.29
PCDHGA8-201ENST00000398604 NBPF7P0C2Y1 421 aaPredicted RBP13.27□□□□□ -0.29
PCDHGA8-201ENST00000398604 HEATR3Q7Z4Q2 680 aa13.27□□□□□ -0.29
PCDHGA8-201ENST00000398604 ESR2Q92731 530 aa13.27□□□□□ -0.29
PCDHGA8-201ENST00000398604 PLCD4Q9BRC7 762 aa13.27□□□□□ -0.29
PCDHGA8-201ENST00000398604 POTEJP0CG39 1038 aa13.26□□□□□ -0.29
PCDHGA8-201ENST00000398604 CCDC102BQ68D86 513 aa13.26□□□□□ -0.29
PCDHGA8-201ENST00000398604 TMC6Q7Z403 805 aa13.26□□□□□ -0.29
PCDHGA8-201ENST00000398604 ZSCAN30Q86W11 494 aa13.26□□□□□ -0.29
PCDHGA8-201ENST00000398604 GNPATO15228 680 aa13.26□□□□□ -0.29
PCDHGA8-201ENST00000398604 LEKR1Q6ZMV7 388 aa13.26□□□□□ -0.29
PCDHGA8-201ENST00000398604 TXLNBQ8N3L3 684 aa13.26□□□□□ -0.29
PCDHGA8-201ENST00000398604 CPA1P15085 419 aa13.26□□□□□ -0.29
PCDHGA8-201ENST00000398604 MCMDC2Q4G0Z9 681 aa13.26□□□□□ -0.29
PCDHGA8-201ENST00000398604 Q6ZUG5 572 aa13.26□□□□□ -0.29
PCDHGA8-201ENST00000398604 GSTTP1A0A1W2PQM5 241 aa13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 ARHGAP45Q92619 1136 aa13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 ALDH1L1O75891 902 aa13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 PRPF4BQ13523 1007 aaKnown RBP13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 SMARCC1Q92922 1105 aaPredicted RBP13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 CCDC97Q96F63 343 aaPredicted RBP13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 ATP7BP35670 1465 aa13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 A1BGP04217 495 aa13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 TFCP2Q12800 502 aa13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 NMIQ13287 307 aaPredicted RBP13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 ZKSCAN3Q9BRR0 538 aa13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 ESYT1Q9BSJ8 1104 aa13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 PODXL2Q9NZ53 605 aa13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 TMCO5BA8MYB1 307 aa13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 PRC1O43663 620 aa13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 DESP17661 470 aa13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 NOP2P46087 812 aaKnown RBP13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 TMEM87AQ8NBN3 555 aa13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 CCDC12Q8WUD4 166 aaPredicted RBP13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 PAG1Q9NWQ8 432 aa13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 ANKARQ7Z5J8 1434 aa13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 IQGAP1P46940 1657 aa13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 PPRC1Q5VV67 1664 aaKnown RBP13.25□□□□□ -0.29
PCDHGA8-201ENST00000398604 SP4Q02446 784 aa13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 PLS1Q14651 629 aa13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 RTN1Q16799 776 aa13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 VPS36Q86VN1 386 aa13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 ZBTB40Q9NUA8 1239 aa13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 ROBO2Q9HCK4 1378 aa13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 HOXC9P31274 260 aa13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 CETN2P41208 172 aa13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 SMC5Q8IY18 1101 aa13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 RBM25P49756 843 aaKnown RBP13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 LUZP1Q86V48 1076 aa13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 LGR6Q9HBX8 967 aa13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 DDX19AQ9NUU7 478 aaKnown RBP13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 CLTCQ00610 1675 aaKnown RBP13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 N4BP3O15049 544 aa13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 CCDC178Q5BJE1 867 aa13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 MAGEB6Q8N7X4 407 aa13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 ZBTB9Q96C00 473 aa13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 RNF216Q9NWF9 866 aaPredicted RBP13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 CNPY2Q9Y2B0 182 aa13.24□□□□□ -0.29
PCDHGA8-201ENST00000398604 ZFYP08048 801 aaPredicted RBP13.23□□□□□ -0.29
PCDHGA8-201ENST00000398604 SYKP43405 635 aa13.23□□□□□ -0.29
PCDHGA8-201ENST00000398604 HMG20BQ9P0W2 317 aa13.23□□□□□ -0.29
PCDHGA8-201ENST00000398604 KIF5CO60282 957 aa13.23□□□□□ -0.29
PCDHGA8-201ENST00000398604 TRMT2AQ8IZ69 625 aaKnown RBP13.23□□□□□ -0.29
PCDHGA8-201ENST00000398604 VTI1AQ96AJ9 217 aa13.23□□□□□ -0.29
PCDHGA8-201ENST00000398604 TCHPQ9BT92 498 aa13.23□□□□□ -0.29
PCDHGA8-201ENST00000398604 JAKMIP3Q5VZ66 844 aa13.23□□□□□ -0.29
PCDHGA8-201ENST00000398604 DCAF5Q96JK2 942 aa13.23□□□□□ -0.29
PCDHGA8-201ENST00000398604 NDUFB9Q9Y6M9 179 aa13.23□□□□□ -0.29
PCDHGA8-201ENST00000398604 ANAPC15P60006 121 aa13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 KIF18AQ8NI77 898 aa13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 TRIM47Q96LD4 638 aa13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 CRACR2AQ9BSW2 395 aa13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 ADCY5O95622 1261 aa13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 DNM1Q05193 864 aaKnown RBP13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 MTERF4Q7Z6M4 381 aaKnown RBP13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 CCDC148Q8NFR7 591 aa13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 PLIN2Q99541 437 aa13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 JDP2Q8WYK2 163 aa13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 ZNF594Q96JF6 807 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 ZNF830Q96NB3 372 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 BICC1Q9H694 974 aaKnown RBP13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 DEPDC5O75140 1603 aa13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 ERICH4A6NGS2 130 aa13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 PPM1FP49593 454 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 PRIM1P49642 420 aaKnown RBP13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 NAPAP54920 295 aa13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 APOBRQ0VD83 1088 aa13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 CEP85Q6P2H3 762 aa13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 VWDEQ8N2E2 1590 aa13.22□□□□□ -0.29
PCDHGA8-201ENST00000398604 CETN1Q12798 172 aa13.21□□□□□ -0.29
PCDHGA8-201ENST00000398604 BICD1Q96G01 975 aa13.21□□□□□ -0.29
PCDHGA8-201ENST00000398604 CTAGE5O15320 804 aa13.21□□□□□ -0.29
PCDHGA8-201ENST00000398604 ZSCAN12O43309 604 aa13.21□□□□□ -0.29
PCDHGA8-201ENST00000398604 PRDM1O75626 825 aa13.21□□□□□ -0.29
PCDHGA8-201ENST00000398604 EIF3JO75822 258 aaKnown RBP13.21□□□□□ -0.29
PCDHGA8-201ENST00000398604 KIF20AO95235 890 aa13.21□□□□□ -0.29
PCDHGA8-201ENST00000398604 TNNI2P48788 182 aa13.21□□□□□ -0.29
PCDHGA8-201ENST00000398604 AMPD3Q01432 767 aa13.21□□□□□ -0.29
PCDHGA8-201ENST00000398604 SPECC1Q5M775 1068 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms