RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 ABCC3O15438 1527 aa16.37■□□□□ 0.21
PCDHGA11-201ENST00000398587 PRM3Q9NNZ6 103 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 ARHGAP31Q2M1Z3 1444 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 CPA1P15085 419 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 ITGA6P23229 1130 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 WWC2Q6AWC2 1192 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 TMC6Q7Z403 805 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 KBTBD3Q8NAB2 608 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 CCDC148Q8NFR7 591 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 ZNF622Q969S3 477 aaKnown RBP eCLIP16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 ANKRD2Q9GZV1 360 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 CABP5Q9NP86 173 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 SNX14Q9Y5W7 946 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 ROBO2Q9HCK4 1378 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 NLRP1Q9C000 1473 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 ERVV-2B6SEH9 535 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 SPTLC2O15270 562 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 CALM1P0DP23 149 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 CALM2P0DP24 149 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 CALM3P0DP25 149 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 ZNF804AQ7Z570 1209 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 IGSF1Q8N6C5 1336 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 PDE8AO60658 829 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 RPS6KB1P23443 525 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 SPA17Q15506 151 aa16.36■□□□□ 0.21
PCDHGA11-201ENST00000398587 DNAJC10Q8IXB1 793 aa16.35■□□□□ 0.21
PCDHGA11-201ENST00000398587 USP6P35125 1406 aa16.35■□□□□ 0.21
PCDHGA11-201ENST00000398587 SLC27A2O14975 620 aa16.35■□□□□ 0.21
PCDHGA11-201ENST00000398587 SLC4A8Q2Y0W8 1093 aa16.35■□□□□ 0.21
PCDHGA11-201ENST00000398587 TNNT1P13805 278 aa16.35■□□□□ 0.21
PCDHGA11-201ENST00000398587 PHKG2P15735 406 aa16.35■□□□□ 0.21
PCDHGA11-201ENST00000398587 ANO6Q4KMQ2 910 aa16.35■□□□□ 0.21
PCDHGA11-201ENST00000398587 NEURL1BA8MQ27 555 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 KCNQ3O43525 872 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 KIF5CO60282 957 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 PRIM1P49642 420 aaKnown RBP16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 PPP4R3BQ5MIZ7 849 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 BRAPQ7Z569 592 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 APPBP2Q92624 585 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 DDX17Q92841 729 aaKnown RBP16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 LMTK3Q96Q04 1460 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 ERLIN2O94905 339 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 IDEP14735 1019 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 PDCL2Q8N4E4 241 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 MIGA1Q8NAN2 632 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 FAM227BQ96M60 508 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 RTL9Q8NET4 1388 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 EIF3JO75822 258 aaKnown RBP16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 ATL3Q6DD88 541 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 ISM2Q6H9L7 571 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 CACNA2D4Q7Z3S7 1137 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 PUM3Q15397 648 aaKnown RBP16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 XAGE2Q96GT9 111 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 EHMT1Q9H9B1 1298 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 PRR36Q9H6K5 1346 aa16.34■□□□□ 0.21
PCDHGA11-201ENST00000398587 TRIM75PA6NK02 468 aa16.33■□□□□ 0.21
PCDHGA11-201ENST00000398587 AXDND1Q5T1B0 1012 aaPredicted RBP16.33■□□□□ 0.21
PCDHGA11-201ENST00000398587 YEATS4O95619 227 aa16.33■□□□□ 0.2
PCDHGA11-201ENST00000398587 PLCG2P16885 1265 aa16.33■□□□□ 0.2
PCDHGA11-201ENST00000398587 NSFL1CQ9UNZ2 370 aaKnown RBP16.33■□□□□ 0.2
PCDHGA11-201ENST00000398587 URI1O94763 535 aaPredicted RBP16.33■□□□□ 0.2
PCDHGA11-201ENST00000398587 MARCKSP29966 332 aaPredicted RBP16.33■□□□□ 0.2
PCDHGA11-201ENST00000398587 ZNF594Q96JF6 807 aaPredicted RBP16.33■□□□□ 0.2
PCDHGA11-201ENST00000398587 NUP88Q99567 741 aaPredicted RBP16.33■□□□□ 0.2
PCDHGA11-201ENST00000398587 MBD4O95243 580 aa16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 CALML3P27482 149 aa16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 HSPA4P34932 840 aa16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 CCDC129Q6ZRS4 1044 aa16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 CPLX3Q8WVH0 158 aa16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 TAF4BQ92750 862 aa16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 C16orf45Q96MC5 204 aaPredicted RBP16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 SEPT11Q9NVA2 429 aaKnown RBP16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 TRMT1Q9NXH9 659 aaKnown RBP16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 ERBB4Q15303 1308 aa16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 MTIF2P46199 727 aaKnown RBP16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 CCDC150Q8NCX0 1101 aa16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 KIF4BQ2VIQ3 1234 aa16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 BEND3Q5T5X7 828 aa16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 ARHGEF25Q86VW2 580 aa16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 LRRC27Q9C0I9 530 aa16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 RMND1Q9NWS8 449 aa16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 MCM9Q9NXL9 1143 aa16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 DENND2AQ9ULE3 1009 aa16.32■□□□□ 0.2
PCDHGA11-201ENST00000398587 GSPT1P15170 499 aaKnown RBP16.31■□□□□ 0.2
PCDHGA11-201ENST00000398587 ATP5JP18859 108 aa16.31■□□□□ 0.2
PCDHGA11-201ENST00000398587 TYRO3Q06418 890 aa16.31■□□□□ 0.2
PCDHGA11-201ENST00000398587 ZC3H12CQ9C0D7 883 aaKnown RBP16.31■□□□□ 0.2
PCDHGA11-201ENST00000398587 KDRP35968 1356 aa16.31■□□□□ 0.2
PCDHGA11-201ENST00000398587 ZNF853P0CG23 659 aa16.31■□□□□ 0.2
PCDHGA11-201ENST00000398587 FEZ1Q99689 392 aa16.31■□□□□ 0.2
PCDHGA11-201ENST00000398587 CWC15Q9P013 229 aaKnown RBP16.31■□□□□ 0.2
PCDHGA11-201ENST00000398587 LLPHQ9BRT6 129 aaKnown RBP16.31■□□□□ 0.2
PCDHGA11-201ENST00000398587 UBA5Q9GZZ9 404 aa16.31■□□□□ 0.2
PCDHGA11-201ENST00000398587 GOLGA6L9A6NEM1 432 aa16.31■□□□□ 0.2
PCDHGA11-201ENST00000398587 TM6SF1Q9BZW5 370 aa16.31■□□□□ 0.2
PCDHGA11-201ENST00000398587 DNAJC25Q9H1X3 360 aa16.31■□□□□ 0.2
PCDHGA11-201ENST00000398587 PRKCSHP14314 528 aaPredicted RBP16.3■□□□□ 0.2
PCDHGA11-201ENST00000398587 TRAF1Q13077 416 aa16.3■□□□□ 0.2
PCDHGA11-201ENST00000398587 TCIRG1Q13488 830 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms