RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 COX20Q5RI15 118 aa8.41□□□□□ -1.06
SMCO1-201ENST00000397537 PDXDC2PQ6P474 469 aa8.41□□□□□ -1.06
SMCO1-201ENST00000397537 PLAAQ9Y263 795 aa8.41□□□□□ -1.06
SMCO1-201ENST00000397537 FRMD4BQ9Y2L6 1034 aa8.41□□□□□ -1.06
SMCO1-201ENST00000397537 DAAM1Q9Y4D1 1078 aa8.41□□□□□ -1.06
SMCO1-201ENST00000397537 TCERG1O14776 1098 aaKnown RBP8.4□□□□□ -1.06
SMCO1-201ENST00000397537 RNASEH2AO75792 299 aaKnown RBP8.4□□□□□ -1.06
SMCO1-201ENST00000397537 RASGRF1Q13972 1273 aa8.4□□□□□ -1.06
SMCO1-201ENST00000397537 TM4SF20Q53R12 229 aa8.4□□□□□ -1.06
SMCO1-201ENST00000397537 PI16Q6UXB8 463 aa8.4□□□□□ -1.06
SMCO1-201ENST00000397537 TTC30BQ8N4P2 665 aa8.4□□□□□ -1.06
SMCO1-201ENST00000397537 JMYQ8N9B5 988 aa8.4□□□□□ -1.06
SMCO1-201ENST00000397537 EAF1Q96JC9 268 aaPredicted RBP8.4□□□□□ -1.06
SMCO1-201ENST00000397537 ST7Q9NRC1 585 aa8.4□□□□□ -1.06
SMCO1-201ENST00000397537 PRPF3O43395 683 aaKnown RBP8.4□□□□□ -1.07
SMCO1-201ENST00000397537 KATNA1O75449 491 aa8.4□□□□□ -1.07
SMCO1-201ENST00000397537 HSPA2P54652 639 aa8.4□□□□□ -1.07
SMCO1-201ENST00000397537 HDGFL2Q7Z4V5 671 aaPredicted RBP8.4□□□□□ -1.07
SMCO1-201ENST00000397537 UBR7Q8N806 425 aa8.4□□□□□ -1.07
SMCO1-201ENST00000397537 SALL2Q9Y467 1007 aaPredicted RBP8.4□□□□□ -1.07
SMCO1-201ENST00000397537 ABCA5Q8WWZ7 1642 aa8.39□□□□□ -1.07
SMCO1-201ENST00000397537 SMAD7O15105 426 aaKnown RBP8.39□□□□□ -1.07
SMCO1-201ENST00000397537 MYCLP1P12525 358 aaPredicted RBP8.39□□□□□ -1.07
SMCO1-201ENST00000397537 FAM193AP78312 1265 aa8.39□□□□□ -1.07
SMCO1-201ENST00000397537 DDR2Q16832 855 aa8.39□□□□□ -1.07
SMCO1-201ENST00000397537 LONRF1Q17RB8 773 aa8.39□□□□□ -1.07
SMCO1-201ENST00000397537 CCDC93Q567U6 631 aa8.39□□□□□ -1.07
SMCO1-201ENST00000397537 THAP3Q8WTV1 239 aaPredicted RBP8.39□□□□□ -1.07
SMCO1-201ENST00000397537 ZNF358Q9NW07 568 aa8.39□□□□□ -1.07
SMCO1-201ENST00000397537 LUZP4Q9P127 313 aa8.39□□□□□ -1.07
SMCO1-201ENST00000397537 MCM8Q9UJA3 840 aa8.39□□□□□ -1.07
SMCO1-201ENST00000397537 PTCH2Q9Y6C5 1203 aa8.39□□□□□ -1.07
SMCO1-201ENST00000397537 ADAMTSL3P82987 1691 aa8.39□□□□□ -1.07
SMCO1-201ENST00000397537 A0A087X0B3 334 aa8.38□□□□□ -1.07
SMCO1-201ENST00000397537 F2P00734 622 aa8.38□□□□□ -1.07
SMCO1-201ENST00000397537 POLD1P28340 1107 aa8.38□□□□□ -1.07
SMCO1-201ENST00000397537 ATP6V1AP38606 617 aa8.38□□□□□ -1.07
SMCO1-201ENST00000397537 GUCY2FP51841 1108 aa8.38□□□□□ -1.07
SMCO1-201ENST00000397537 NEK2P51955 445 aa8.38□□□□□ -1.07
SMCO1-201ENST00000397537 CCDC70Q6NSX1 233 aa8.38□□□□□ -1.07
SMCO1-201ENST00000397537 ANKRD13DQ6ZTN6 518 aa8.38□□□□□ -1.07
SMCO1-201ENST00000397537 CCDC89Q8N998 374 aa8.38□□□□□ -1.07
SMCO1-201ENST00000397537 RTFDC1Q9BY42 306 aaPredicted RBP8.38□□□□□ -1.07
SMCO1-201ENST00000397537 CDH19Q9H159 772 aa8.38□□□□□ -1.07
SMCO1-201ENST00000397537 TEX14Q8IWB6 1497 aa8.38□□□□□ -1.07
SMCO1-201ENST00000397537 TERF1P54274 439 aa8.38□□□□□ -1.07
SMCO1-201ENST00000397537 Q3C1V9 767 aa8.38□□□□□ -1.07
SMCO1-201ENST00000397537 CAAP1Q9H8G2 361 aa8.38□□□□□ -1.07
SMCO1-201ENST00000397537 NGRNQ9NPE2 291 aaKnown RBP8.38□□□□□ -1.07
SMCO1-201ENST00000397537 NOB1Q9ULX3 412 aaKnown RBP8.38□□□□□ -1.07
SMCO1-201ENST00000397537 ADAMTS12P58397 1594 aa8.38□□□□□ -1.07
SMCO1-201ENST00000397537 KIF21BO75037 1637 aa8.38□□□□□ -1.07
SMCO1-201ENST00000397537 DHX16O60231 1041 aaKnown RBP8.37□□□□□ -1.07
SMCO1-201ENST00000397537 TCEA3O75764 348 aa8.37□□□□□ -1.07
SMCO1-201ENST00000397537 RAPGEF3O95398 923 aa8.37□□□□□ -1.07
SMCO1-201ENST00000397537 IFIT2P09913 472 aaKnown RBP8.37□□□□□ -1.07
SMCO1-201ENST00000397537 CCDC96Q2M329 555 aa8.37□□□□□ -1.07
SMCO1-201ENST00000397537 IL31Q6EBC2 164 aa8.37□□□□□ -1.07
SMCO1-201ENST00000397537 CC2D1AQ6P1N0 951 aaPredicted RBP8.37□□□□□ -1.07
SMCO1-201ENST00000397537 TCEAL8Q8IYN2 117 aa8.37□□□□□ -1.07
SMCO1-201ENST00000397537 CPLX3Q8WVH0 158 aa8.37□□□□□ -1.07
SMCO1-201ENST00000397537 IFT122Q9HBG6 1241 aa8.37□□□□□ -1.07
SMCO1-201ENST00000397537 PLB1Q6P1J6 1458 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 ASXL2Q76L83 1435 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 ATAD2Q6PL18 1390 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 F6X3S4 739 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 RRM1P23921 792 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 MLC1Q15049 377 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 ALFQ53S48 1182 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 C1QTNF12Q5T7M4 302 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 DGKHQ86XP1 1220 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 SUGP1Q8IWZ8 645 aaKnown RBP8.36□□□□□ -1.07
SMCO1-201ENST00000397537 FAM169BQ8N8A8 192 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 MFSD3Q96ES6 412 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 SHDQ96IW2 340 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 KCNH8Q96L42 1107 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 LRRC27Q9C0I9 530 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 DNAJC25Q9H1X3 360 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 LRFN2Q9ULH4 789 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 NAP1L2Q9ULW6 460 aaPredicted RBP8.36□□□□□ -1.07
SMCO1-201ENST00000397537 PRSS47A8MTI9 375 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 TRIM6-TRIM34B2RNG4 842 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 DIAPH1O60610 1272 aaKnown RBP8.36□□□□□ -1.07
SMCO1-201ENST00000397537 USP17L7P0C7H9 530 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 NEK3P51956 506 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 DNM1Q05193 864 aaKnown RBP8.36□□□□□ -1.07
SMCO1-201ENST00000397537 SLC4A8Q2Y0W8 1093 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 SWT1Q5T5J6 900 aaKnown RBP8.36□□□□□ -1.07
SMCO1-201ENST00000397537 RNF180Q86T96 592 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 ERP27Q96DN0 273 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 MAPK8IP1Q9UQF2 711 aa8.36□□□□□ -1.07
SMCO1-201ENST00000397537 MAP3K4Q9Y6R4 1608 aa8.35□□□□□ -1.07
SMCO1-201ENST00000397537 A0A1W2PRU2 124 aa8.35□□□□□ -1.07
SMCO1-201ENST00000397537 IRS4O14654 1257 aaPredicted RBP8.35□□□□□ -1.07
SMCO1-201ENST00000397537 HIP1RO75146 1068 aa8.35□□□□□ -1.07
SMCO1-201ENST00000397537 CASP2P42575 452 aa8.35□□□□□ -1.07
SMCO1-201ENST00000397537 USP4Q13107 963 aa8.35□□□□□ -1.07
SMCO1-201ENST00000397537 PIN1Q13526 163 aaPredicted RBP8.35□□□□□ -1.07
SMCO1-201ENST00000397537 CT47A1Q5JQC4 288 aaPredicted RBP8.35□□□□□ -1.07
SMCO1-201ENST00000397537 C1orf53Q5VUE5 145 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 282.1 ms