RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 ZSCAN22P10073 491 aaPredicted RBP12.98□□□□□ -0.33
IFT140-202ENST00000397417 CRKLP46109 303 aaKnown RBP12.98□□□□□ -0.33
IFT140-202ENST00000397417 SSRP1Q08945 709 aaKnown RBP12.98□□□□□ -0.33
IFT140-202ENST00000397417 CCAR1Q8IX12 1150 aaKnown RBP12.98□□□□□ -0.33
IFT140-202ENST00000397417 DACT1Q9NYF0 836 aa12.98□□□□□ -0.33
IFT140-202ENST00000397417 PPRC1Q5VV67 1664 aaKnown RBP12.98□□□□□ -0.33
IFT140-202ENST00000397417 AATKQ6ZMQ8 1374 aa12.98□□□□□ -0.33
IFT140-202ENST00000397417 WDR17Q8IZU2 1322 aa12.98□□□□□ -0.33
IFT140-202ENST00000397417 SLC27A2O14975 620 aa12.97□□□□□ -0.33
IFT140-202ENST00000397417 ZNF76P36508 570 aa12.97□□□□□ -0.33
IFT140-202ENST00000397417 TCP10Q12799 353 aa12.97□□□□□ -0.33
IFT140-202ENST00000397417 NAT10Q9H0A0 1025 aaKnown RBP12.97□□□□□ -0.33
IFT140-202ENST00000397417 RRAGDQ9NQL2 400 aaPredicted RBP12.97□□□□□ -0.33
IFT140-202ENST00000397417 ADGRB3O60242 1522 aa12.97□□□□□ -0.33
IFT140-202ENST00000397417 ADGRL3Q9HAR2 1447 aa12.97□□□□□ -0.33
IFT140-202ENST00000397417 PDE8AO60658 829 aa12.97□□□□□ -0.33
IFT140-202ENST00000397417 TXLNAP40222 546 aa12.97□□□□□ -0.33
IFT140-202ENST00000397417 PHKA1P46020 1223 aa12.97□□□□□ -0.33
IFT140-202ENST00000397417 GRM1Q13255 1194 aa12.97□□□□□ -0.33
IFT140-202ENST00000397417 SPECC1Q5M775 1068 aa12.97□□□□□ -0.33
IFT140-202ENST00000397417 MAGEB6P1A0A0J9YX57 407 aa12.97□□□□□ -0.33
IFT140-202ENST00000397417 ESPNB1AK53 854 aa12.97□□□□□ -0.33
IFT140-202ENST00000397417 CFAP100Q494V2 611 aa12.97□□□□□ -0.33
IFT140-202ENST00000397417 PTPDC1A2A3K4 754 aa12.97□□□□□ -0.33
IFT140-202ENST00000397417 AFMP43652 599 aa12.97□□□□□ -0.33
IFT140-202ENST00000397417 TANGO6Q9C0B7 1094 aa12.97□□□□□ -0.33
IFT140-202ENST00000397417 SETBP1Q9Y6X0 1596 aa12.96□□□□□ -0.33
IFT140-202ENST00000397417 HOXB7P09629 217 aa12.96□□□□□ -0.33
IFT140-202ENST00000397417 FAM196AQ6ZSG2 479 aa12.96□□□□□ -0.33
IFT140-202ENST00000397417 FEZ1Q99689 392 aa12.96□□□□□ -0.33
IFT140-202ENST00000397417 QTRT2Q9H974 415 aaKnown RBP12.96□□□□□ -0.33
IFT140-202ENST00000397417 IPO7O95373 1038 aaKnown RBP12.96□□□□□ -0.33
IFT140-202ENST00000397417 TSPY3P0CV98 308 aa12.96□□□□□ -0.33
IFT140-202ENST00000397417 TSPY8P0CW00 308 aa12.96□□□□□ -0.33
IFT140-202ENST00000397417 ZYXQ15942 572 aaKnown RBP12.96□□□□□ -0.33
IFT140-202ENST00000397417 IFIT1BQ5T764 474 aaKnown RBP12.96□□□□□ -0.33
IFT140-202ENST00000397417 ZNF532Q9HCE3 1301 aa12.96□□□□□ -0.34
IFT140-202ENST00000397417 IQSEC2Q5JU85 1478 aa12.96□□□□□ -0.34
IFT140-202ENST00000397417 OFD1O75665 1012 aa12.96□□□□□ -0.34
IFT140-202ENST00000397417 IGKV5-2P06315 115 aa12.96□□□□□ -0.34
IFT140-202ENST00000397417 HMGB1P09429 215 aaKnown RBP12.96□□□□□ -0.34
IFT140-202ENST00000397417 IDEP14735 1019 aa12.96□□□□□ -0.34
IFT140-202ENST00000397417 SCAND2PQ9GZW5 306 aaPredicted RBP12.96□□□□□ -0.34
IFT140-202ENST00000397417 UBA5Q9GZZ9 404 aa12.96□□□□□ -0.34
IFT140-202ENST00000397417 KAT14Q9H8E8 782 aa12.96□□□□□ -0.34
IFT140-202ENST00000397417 SPATA31A3Q5VYP0 1347 aa12.95□□□□□ -0.34
IFT140-202ENST00000397417 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
IFT140-202ENST00000397417 TTLL12Q14166 644 aaPredicted RBP12.95□□□□□ -0.34
IFT140-202ENST00000397417 ZSCAN23Q3MJ62 389 aa12.95□□□□□ -0.34
IFT140-202ENST00000397417 ZNF589Q86UQ0 364 aaPredicted RBP12.95□□□□□ -0.34
IFT140-202ENST00000397417 CARD10Q9BWT7 1032 aa12.95□□□□□ -0.34
IFT140-202ENST00000397417 TRMT1Q9NXH9 659 aaKnown RBP12.95□□□□□ -0.34
IFT140-202ENST00000397417 ERVV-2B6SEH9 535 aa12.95□□□□□ -0.34
IFT140-202ENST00000397417 BAG3O95817 575 aa12.95□□□□□ -0.34
IFT140-202ENST00000397417 PRKG1Q13976 671 aa12.95□□□□□ -0.34
IFT140-202ENST00000397417 RUFY3Q7L099 469 aa12.95□□□□□ -0.34
IFT140-202ENST00000397417 CRNKL1Q9BZJ0 848 aaKnown RBP12.95□□□□□ -0.34
IFT140-202ENST00000397417 SEC63Q9UGP8 760 aaKnown RBP12.95□□□□□ -0.34
IFT140-202ENST00000397417 NOL7Q9UMY1 257 aaKnown RBP12.95□□□□□ -0.34
IFT140-202ENST00000397417 DEPDC5O75140 1603 aa12.95□□□□□ -0.34
IFT140-202ENST00000397417 CCDC194A0A1B0GVG4 234 aa12.95□□□□□ -0.34
IFT140-202ENST00000397417 TPM2P07951 284 aa12.95□□□□□ -0.34
IFT140-202ENST00000397417 KBTBD3Q8NAB2 608 aa12.95□□□□□ -0.34
IFT140-202ENST00000397417 ARHGAP31Q2M1Z3 1444 aa12.94□□□□□ -0.34
IFT140-202ENST00000397417 ATP7BP35670 1465 aa12.94□□□□□ -0.34
IFT140-202ENST00000397417 EPS15P42566 896 aa12.94□□□□□ -0.34
IFT140-202ENST00000397417 RAB3GAP1Q15042 981 aa12.94□□□□□ -0.34
IFT140-202ENST00000397417 FAM47AQ5JRC9 791 aa12.94□□□□□ -0.34
IFT140-202ENST00000397417 HEATR3Q7Z4Q2 680 aa12.94□□□□□ -0.34
IFT140-202ENST00000397417 RNF41Q9H4P4 317 aaPredicted RBP12.94□□□□□ -0.34
IFT140-202ENST00000397417 SASH1O94885 1247 aa12.94□□□□□ -0.34
IFT140-202ENST00000397417 HMGN5P82970 282 aaKnown RBP12.94□□□□□ -0.34
IFT140-202ENST00000397417 DHX32Q7L7V1 743 aaKnown RBP12.94□□□□□ -0.34
IFT140-202ENST00000397417 VWDEQ8N2E2 1590 aa12.94□□□□□ -0.34
IFT140-202ENST00000397417 NRXN1Q9ULB1 1477 aa12.94□□□□□ -0.34
IFT140-202ENST00000397417 F13A1P00488 732 aa12.94□□□□□ -0.34
IFT140-202ENST00000397417 PDE4BQ07343 736 aa12.94□□□□□ -0.34
IFT140-202ENST00000397417 RTN1Q16799 776 aa12.94□□□□□ -0.34
IFT140-202ENST00000397417 DOK7Q18PE1 504 aa12.94□□□□□ -0.34
IFT140-202ENST00000397417 CNNM3Q8NE01 707 aa12.94□□□□□ -0.34
IFT140-202ENST00000397417 GADD45BO75293 160 aaPredicted RBP12.93□□□□□ -0.34
IFT140-202ENST00000397417 MAPKAPK5Q8IW41 473 aa12.93□□□□□ -0.34
IFT140-202ENST00000397417 CEP57L1Q8IYX8 460 aa12.93□□□□□ -0.34
IFT140-202ENST00000397417 HMG20BQ9P0W2 317 aa12.93□□□□□ -0.34
IFT140-202ENST00000397417 LDHBP07195 334 aaKnown RBP12.93□□□□□ -0.34
IFT140-202ENST00000397417 HIBADHP31937 336 aaKnown RBP12.93□□□□□ -0.34
IFT140-202ENST00000397417 HSP90AA2PQ14568 343 aaPredicted RBP12.93□□□□□ -0.34
IFT140-202ENST00000397417 TULP4Q9NRJ4 1543 aa12.93□□□□□ -0.34
IFT140-202ENST00000397417 LIG1P18858 919 aa12.93□□□□□ -0.34
IFT140-202ENST00000397417 ZNF165P49910 485 aa12.93□□□□□ -0.34
IFT140-202ENST00000397417 CTSWP56202 376 aa12.93□□□□□ -0.34
IFT140-202ENST00000397417 PUM3Q15397 648 aaKnown RBP12.93□□□□□ -0.34
IFT140-202ENST00000397417 ESR2Q92731 530 aa12.93□□□□□ -0.34
IFT140-202ENST00000397417 A0A1B0GVL5 298 aa12.92□□□□□ -0.34
IFT140-202ENST00000397417 ZFYP08048 801 aaPredicted RBP12.92□□□□□ -0.34
IFT140-202ENST00000397417 ERCC3P19447 782 aa12.92□□□□□ -0.34
IFT140-202ENST00000397417 RPS8P62241 208 aaKnown RBP12.92□□□□□ -0.34
IFT140-202ENST00000397417 TMEM132AQ24JP5 1023 aa12.92□□□□□ -0.34
IFT140-202ENST00000397417 GPIHBP1Q8IV16 184 aa12.92□□□□□ -0.34
IFT140-202ENST00000397417 MROH2AA6NES4 1674 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms