RNA–Protein interactions for RNA: ENST00000397174.6

SCMH1-209, Transcript of Scm polycomb group protein homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCMH1, Length 2,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-209ENST00000397174 LIG3P49916 1009 aa12.07□□□□□ -0.48
SCMH1-209ENST00000397174 PTPN21Q16825 1174 aa12.07□□□□□ -0.48
SCMH1-209ENST00000397174 CCDC102AQ96A19 550 aa12.07□□□□□ -0.48
SCMH1-209ENST00000397174 ANKZF1Q9H8Y5 726 aa12.07□□□□□ -0.48
SCMH1-209ENST00000397174 MIS18AQ9NYP9 233 aa12.07□□□□□ -0.48
SCMH1-209ENST00000397174 CCDC189A1A4V9 331 aa12.07□□□□□ -0.48
SCMH1-209ENST00000397174 H3BQV1 296 aa12.07□□□□□ -0.48
SCMH1-209ENST00000397174 HNRNPH1P31943 449 aaKnown RBP12.07□□□□□ -0.48
SCMH1-209ENST00000397174 FOSBP53539 338 aa12.07□□□□□ -0.48
SCMH1-209ENST00000397174 FAM160A1Q05DH4 1040 aa12.07□□□□□ -0.48
SCMH1-209ENST00000397174 DHX8Q14562 1220 aaKnown RBP12.07□□□□□ -0.48
SCMH1-209ENST00000397174 IFFO2Q5TF58 517 aa12.07□□□□□ -0.48
SCMH1-209ENST00000397174 KCNV1Q6PIU1 500 aa12.07□□□□□ -0.48
SCMH1-209ENST00000397174 FSIP1Q8NA03 581 aa12.07□□□□□ -0.48
SCMH1-209ENST00000397174 KIFC2Q96AC6 838 aa12.07□□□□□ -0.48
SCMH1-209ENST00000397174 PNKPQ96T60 521 aa12.07□□□□□ -0.48
SCMH1-209ENST00000397174 ABCB6Q9NP58 842 aa12.07□□□□□ -0.48
SCMH1-209ENST00000397174 RBM8AQ9Y5S9 174 aaKnown RBP12.07□□□□□ -0.48
SCMH1-209ENST00000397174 MROH1Q8NDA8 1641 aa12.07□□□□□ -0.48
SCMH1-209ENST00000397174 SURF6O75683 361 aaKnown RBP12.06□□□□□ -0.48
SCMH1-209ENST00000397174 LMOD1P29536 600 aaPredicted RBP12.06□□□□□ -0.48
SCMH1-209ENST00000397174 ADD1P35611 737 aaKnown RBP12.06□□□□□ -0.48
SCMH1-209ENST00000397174 HNRNPLLQ8WVV9 542 aaKnown RBP12.06□□□□□ -0.48
SCMH1-209ENST00000397174 FAM204AQ9H8W3 233 aa12.06□□□□□ -0.48
SCMH1-209ENST00000397174 EIF5P55010 431 aaKnown RBP12.06□□□□□ -0.48
SCMH1-209ENST00000397174 FANCCQ00597 558 aa12.06□□□□□ -0.48
SCMH1-209ENST00000397174 TOB2Q14106 344 aaPredicted RBP12.06□□□□□ -0.48
SCMH1-209ENST00000397174 FBXW10Q5XX13 1052 aa12.06□□□□□ -0.48
SCMH1-209ENST00000397174 EGFL6Q8IUX8 553 aa12.06□□□□□ -0.48
SCMH1-209ENST00000397174 RHPN1Q8TCX5 695 aa12.06□□□□□ -0.48
SCMH1-209ENST00000397174 L1RE1Q9UN81 338 aa12.06□□□□□ -0.48
SCMH1-209ENST00000397174 BIN1O00499 593 aa12.06□□□□□ -0.48
SCMH1-209ENST00000397174 ATP1A3P13637 1013 aa12.06□□□□□ -0.48
SCMH1-209ENST00000397174 FAM71BQ8TC56 605 aa12.06□□□□□ -0.48
SCMH1-209ENST00000397174 RUFY2Q8WXA3 655 aa12.06□□□□□ -0.48
SCMH1-209ENST00000397174 DPF2Q92785 391 aa12.06□□□□□ -0.48
SCMH1-209ENST00000397174 CABP1Q9NZU7 370 aa12.06□□□□□ -0.48
SCMH1-209ENST00000397174 PUF60Q9UHX1 559 aaKnown RBP12.06□□□□□ -0.48
SCMH1-209ENST00000397174 TAF6LQ9Y6J9 622 aa12.06□□□□□ -0.48
SCMH1-209ENST00000397174 NPATQ14207 1427 aa12.05□□□□□ -0.48
SCMH1-209ENST00000397174 CHMP4BP1P59074 171 aa12.05□□□□□ -0.48
SCMH1-209ENST00000397174 NCAPHQ15003 741 aa12.05□□□□□ -0.48
SCMH1-209ENST00000397174 HSP90B2PQ58FF3 399 aa12.05□□□□□ -0.48
SCMH1-209ENST00000397174 CLIC6Q96NY7 704 aa12.05□□□□□ -0.48
SCMH1-209ENST00000397174 SDF4Q9BRK5 362 aa12.05□□□□□ -0.48
SCMH1-209ENST00000397174 RCOR1Q9UKL0 485 aa12.05□□□□□ -0.48
SCMH1-209ENST00000397174 FRMPD1Q5SYB0 1578 aa12.05□□□□□ -0.48
SCMH1-209ENST00000397174 BLOC1S2Q6QNY1 142 aa12.05□□□□□ -0.48
SCMH1-209ENST00000397174 CHD2O14647 1828 aaKnown RBP12.05□□□□□ -0.48
SCMH1-209ENST00000397174 EXOC5O00471 708 aa12.04□□□□□ -0.48
SCMH1-209ENST00000397174 SLC27A2O14975 620 aa12.04□□□□□ -0.48
SCMH1-209ENST00000397174 USP5P45974 858 aa12.04□□□□□ -0.48
SCMH1-209ENST00000397174 CASP8Q14790 479 aa12.04□□□□□ -0.48
SCMH1-209ENST00000397174 FCHSD1Q86WN1 690 aa12.04□□□□□ -0.48
SCMH1-209ENST00000397174 USP28Q96RU2 1077 aa12.04□□□□□ -0.48
SCMH1-209ENST00000397174 MAP2P11137 1827 aaKnown RBP12.04□□□□□ -0.48
SCMH1-209ENST00000397174 SCP2P22307 547 aa12.04□□□□□ -0.48
SCMH1-209ENST00000397174 RPS6KB1P23443 525 aa12.04□□□□□ -0.48
SCMH1-209ENST00000397174 PSMA5P28066 241 aa12.04□□□□□ -0.48
SCMH1-209ENST00000397174 IDI1Q13907 227 aa12.04□□□□□ -0.48
SCMH1-209ENST00000397174 ANKRD1Q15327 319 aa12.04□□□□□ -0.48
SCMH1-209ENST00000397174 TMEM139Q8IV31 216 aa12.04□□□□□ -0.48
SCMH1-209ENST00000397174 BPIFA3Q9BQP9 254 aa12.04□□□□□ -0.48
SCMH1-209ENST00000397174 ME1P48163 572 aa12.03□□□□□ -0.48
SCMH1-209ENST00000397174 KARSQ15046 597 aaKnown RBP12.03□□□□□ -0.48
SCMH1-209ENST00000397174 TOGARAM2Q6ZUX3 1019 aa12.03□□□□□ -0.48
SCMH1-209ENST00000397174 SRGAP1Q7Z6B7 1085 aa12.03□□□□□ -0.48
SCMH1-209ENST00000397174 CCDC12Q8WUD4 166 aaPredicted RBP12.03□□□□□ -0.48
SCMH1-209ENST00000397174 RAB21Q9UL25 225 aa12.03□□□□□ -0.48
SCMH1-209ENST00000397174 ATP7BP35670 1465 aa12.03□□□□□ -0.48
SCMH1-209ENST00000397174 ERLIN1O75477 346 aa12.03□□□□□ -0.48
SCMH1-209ENST00000397174 PPP2R5AQ15172 486 aa12.03□□□□□ -0.48
SCMH1-209ENST00000397174 RPAINQ86UA6 219 aa12.03□□□□□ -0.48
SCMH1-209ENST00000397174 ERC1Q8IUD2 1116 aa12.03□□□□□ -0.48
SCMH1-209ENST00000397174 FMR1NBQ8N0W7 255 aaPredicted RBP12.03□□□□□ -0.48
SCMH1-209ENST00000397174 MSL3Q8N5Y2 521 aaKnown RBP12.03□□□□□ -0.48
SCMH1-209ENST00000397174 TMEM232C9JQI7 657 aa12.03□□□□□ -0.48
SCMH1-209ENST00000397174 ARHGAP6O43182 974 aa12.03□□□□□ -0.48
SCMH1-209ENST00000397174 CUTAO60888 179 aa12.03□□□□□ -0.48
SCMH1-209ENST00000397174 WDHD1O75717 1129 aaPredicted RBP12.03□□□□□ -0.48
SCMH1-209ENST00000397174 SAMD1Q6SPF0 538 aaPredicted RBP12.03□□□□□ -0.48
SCMH1-209ENST00000397174 SSH3Q8TE77 659 aa12.03□□□□□ -0.48
SCMH1-209ENST00000397174 KIAA1468Q9P260 1216 aa12.03□□□□□ -0.48
SCMH1-209ENST00000397174 ARAP3Q8WWN8 1544 aa12.03□□□□□ -0.48
SCMH1-209ENST00000397174 KIDINS220Q9ULH0 1771 aa12.02□□□□□ -0.48
SCMH1-209ENST00000397174 A0A1B0GVL5 298 aa12.02□□□□□ -0.49
SCMH1-209ENST00000397174 FBXO31Q5XUX0 539 aaPredicted RBP12.02□□□□□ -0.49
SCMH1-209ENST00000397174 PPP1R42Q7Z4L9 355 aa12.02□□□□□ -0.49
SCMH1-209ENST00000397174 MSANTD4Q8NCY6 345 aa12.02□□□□□ -0.49
SCMH1-209ENST00000397174 AFAP1L1Q8TED9 768 aa12.02□□□□□ -0.49
SCMH1-209ENST00000397174 IRX2Q9BZI1 471 aaPredicted RBP12.02□□□□□ -0.49
SCMH1-209ENST00000397174 FAM107BQ9H098 131 aa12.02□□□□□ -0.49
SCMH1-209ENST00000397174 LRRIQ3A6PVS8 624 aaPredicted RBP12.02□□□□□ -0.49
SCMH1-209ENST00000397174 RNF40O75150 1001 aa12.02□□□□□ -0.49
SCMH1-209ENST00000397174 RHOXF2BP0C7M4 288 aa12.02□□□□□ -0.49
SCMH1-209ENST00000397174 UBTFL1P0CB47 393 aaPredicted RBP12.02□□□□□ -0.49
SCMH1-209ENST00000397174 UBASH3AP57075 661 aa12.02□□□□□ -0.49
SCMH1-209ENST00000397174 VSNL1P62760 191 aa12.02□□□□□ -0.49
SCMH1-209ENST00000397174 CPLX2Q6PUV4 134 aaKnown RBP12.02□□□□□ -0.49
SCMH1-209ENST00000397174 FAM227BQ96M60 508 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms