RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 FTSJ3Q8IY81 847 aaKnown RBP12.11□□□□□ -0.47
MCF2L-206ENST00000397021 TRPM4Q8TD43 1214 aa12.11□□□□□ -0.47
MCF2L-206ENST00000397021 COA1Q9GZY4 146 aa12.11□□□□□ -0.47
MCF2L-206ENST00000397021 SIL1Q9H173 461 aa12.11□□□□□ -0.47
MCF2L-206ENST00000397021 ADARB2Q9NS39 739 aaKnown RBP12.11□□□□□ -0.47
MCF2L-206ENST00000397021 IRS2Q9Y4H2 1338 aa12.11□□□□□ -0.47
MCF2L-206ENST00000397021 EGFRP00533 1210 aa12.1□□□□□ -0.47
MCF2L-206ENST00000397021 GNAI3P08754 354 aa12.1□□□□□ -0.47
MCF2L-206ENST00000397021 HIRAP54198 1017 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-206ENST00000397021 PTPN12Q05209 780 aaKnown RBP12.1□□□□□ -0.47
MCF2L-206ENST00000397021 TBC1D10BQ4KMP7 808 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-206ENST00000397021 RSBN1LQ6PCB5 846 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-206ENST00000397021 USP50Q70EL3 339 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-206ENST00000397021 DZIP1LQ8IYY4 767 aaKnown RBP12.1□□□□□ -0.47
MCF2L-206ENST00000397021 PANK1Q8TE04 598 aa12.1□□□□□ -0.47
MCF2L-206ENST00000397021 PA2G4Q9UQ80 394 aaKnown RBP12.1□□□□□ -0.47
MCF2L-206ENST00000397021 JAG2Q9Y219 1238 aa12.1□□□□□ -0.47
MCF2L-206ENST00000397021 SPEF2Q9C093 1822 aa12.09□□□□□ -0.47
MCF2L-206ENST00000397021 USP17L3A6NCW0 530 aa12.09□□□□□ -0.47
MCF2L-206ENST00000397021 USP17L4A6NCW7 530 aa12.09□□□□□ -0.47
MCF2L-206ENST00000397021 H7C1D1 291 aa12.09□□□□□ -0.47
MCF2L-206ENST00000397021 GYG1P46976 350 aa12.09□□□□□ -0.47
MCF2L-206ENST00000397021 APLP1P51693 650 aa12.09□□□□□ -0.47
MCF2L-206ENST00000397021 GTF2IP78347 998 aa12.09□□□□□ -0.47
MCF2L-206ENST00000397021 FMR1Q06787 632 aaKnown RBP eCLIP12.09□□□□□ -0.47
MCF2L-206ENST00000397021 USP17L1Q7RTZ2 530 aa12.09□□□□□ -0.47
MCF2L-206ENST00000397021 ITPRIPQ8IWB1 547 aa12.09□□□□□ -0.47
MCF2L-206ENST00000397021 CNTROBQ8N137 903 aa12.09□□□□□ -0.47
MCF2L-206ENST00000397021 DPF2Q92785 391 aa12.09□□□□□ -0.47
MCF2L-206ENST00000397021 C1orf115Q9H7X2 142 aa12.09□□□□□ -0.47
MCF2L-206ENST00000397021 CD209Q9NNX6 404 aa12.09□□□□□ -0.47
MCF2L-206ENST00000397021 RCAN3Q9UKA8 241 aa12.09□□□□□ -0.47
MCF2L-206ENST00000397021 MROH5Q6ZUA9 1318 aa12.09□□□□□ -0.47
MCF2L-206ENST00000397021 MYH3P11055 1940 aa12.08□□□□□ -0.48
MCF2L-206ENST00000397021 EYA2O00167 538 aa12.08□□□□□ -0.48
MCF2L-206ENST00000397021 ITGBL1O95965 494 aaPredicted RBP12.08□□□□□ -0.48
MCF2L-206ENST00000397021 GNAI2P04899 355 aa12.08□□□□□ -0.48
MCF2L-206ENST00000397021 RPS12P25398 132 aaKnown RBP12.08□□□□□ -0.48
MCF2L-206ENST00000397021 DACT2Q5SW24 774 aa12.08□□□□□ -0.48
MCF2L-206ENST00000397021 HDAC5Q9UQL6 1122 aa12.08□□□□□ -0.48
MCF2L-206ENST00000397021 TRAF5O00463 557 aa12.07□□□□□ -0.48
MCF2L-206ENST00000397021 SRGAP3O43295 1099 aa12.07□□□□□ -0.48
MCF2L-206ENST00000397021 PDE8BO95263 885 aa12.07□□□□□ -0.48
MCF2L-206ENST00000397021 UBE4AQ14139 1066 aa12.07□□□□□ -0.48
MCF2L-206ENST00000397021 TTLL5Q6EMB2 1281 aa12.07□□□□□ -0.48
MCF2L-206ENST00000397021 DLK2Q6UY11 383 aa12.07□□□□□ -0.48
MCF2L-206ENST00000397021 C15orf52Q6ZUT6 534 aaKnown RBP12.07□□□□□ -0.48
MCF2L-206ENST00000397021 ATG9AQ7Z3C6 839 aa12.07□□□□□ -0.48
MCF2L-206ENST00000397021 ZNF804AQ7Z570 1209 aa12.07□□□□□ -0.48
MCF2L-206ENST00000397021 VGLL2Q8N8G2 317 aa12.07□□□□□ -0.48
MCF2L-206ENST00000397021 FAM84BQ96KN1 310 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-206ENST00000397021 GMLQ99445 158 aa12.07□□□□□ -0.48
MCF2L-206ENST00000397021 IQSEC3Q9UPP2 1182 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-206ENST00000397021 USP17L8P0C7I0 530 aa12.06□□□□□ -0.48
MCF2L-206ENST00000397021 HIBADHP31937 336 aaKnown RBP12.06□□□□□ -0.48
MCF2L-206ENST00000397021 KIF4BQ2VIQ3 1234 aa12.06□□□□□ -0.48
MCF2L-206ENST00000397021 STRIP1Q5VSL9 837 aa12.06□□□□□ -0.48
MCF2L-206ENST00000397021 KIAA0825Q8IV33 1275 aa12.06□□□□□ -0.48
MCF2L-206ENST00000397021 AGBL3Q8NEM8 1001 aa12.06□□□□□ -0.48
MCF2L-206ENST00000397021 GLIS2Q9BZE0 524 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-206ENST00000397021 ASTN2O75129 1339 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-206ENST00000397021 PASKQ96RG2 1323 aa12.06□□□□□ -0.48
MCF2L-206ENST00000397021 PNMA6EA0A0J9YXQ4 647 aa12.05□□□□□ -0.48
MCF2L-206ENST00000397021 F8W031 263 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-206ENST00000397021 ZBTB7BO15156 539 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-206ENST00000397021 IL1R1P14778 569 aa12.05□□□□□ -0.48
MCF2L-206ENST00000397021 ZNF280AP59817 542 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-206ENST00000397021 CERS5Q8N5B7 392 aa12.05□□□□□ -0.48
MCF2L-206ENST00000397021 COPRSQ9NQ92 184 aa12.05□□□□□ -0.48
MCF2L-206ENST00000397021 SCAF8Q9UPN6 1271 aaKnown RBP12.05□□□□□ -0.48
MCF2L-206ENST00000397021 SCN4AP35499 1836 aa12.04□□□□□ -0.48
MCF2L-206ENST00000397021 CIAO1O76071 339 aa12.04□□□□□ -0.48
MCF2L-206ENST00000397021 FGFR2P21802 821 aa12.04□□□□□ -0.48
MCF2L-206ENST00000397021 BCAMP50895 628 aa12.04□□□□□ -0.48
MCF2L-206ENST00000397021 CHAF1AQ13111 956 aaPredicted RBP12.04□□□□□ -0.48
MCF2L-206ENST00000397021 MTX1Q13505 466 aa12.04□□□□□ -0.48
MCF2L-206ENST00000397021 PUM3Q15397 648 aaKnown RBP12.04□□□□□ -0.48
MCF2L-206ENST00000397021 C20orf194Q5TEA3 1177 aa12.04□□□□□ -0.48
MCF2L-206ENST00000397021 USP48Q86UV5 1035 aa12.04□□□□□ -0.48
MCF2L-206ENST00000397021 VPS37DQ86XT2 251 aa12.04□□□□□ -0.48
MCF2L-206ENST00000397021 DNAJC5GQ8N7S2 189 aa12.04□□□□□ -0.48
MCF2L-206ENST00000397021 MYOZ2Q9NPC6 264 aa12.04□□□□□ -0.48
MCF2L-206ENST00000397021 CEP126Q9P2H0 1117 aa12.04□□□□□ -0.48
MCF2L-206ENST00000397021 COG6Q9Y2V7 657 aa12.04□□□□□ -0.48
MCF2L-206ENST00000397021 ADAMTSL1Q8N6G6 1762 aa12.03□□□□□ -0.48
MCF2L-206ENST00000397021 ADM5C9JUS6 153 aa12.03□□□□□ -0.48
MCF2L-206ENST00000397021 IFIT1P09914 478 aaKnown RBP12.03□□□□□ -0.48
MCF2L-206ENST00000397021 IL15P40933 162 aaPredicted RBP12.03□□□□□ -0.48
MCF2L-206ENST00000397021 SCARF1Q14162 830 aa12.03□□□□□ -0.48
MCF2L-206ENST00000397021 CAVIN4Q5BKX8 364 aa12.03□□□□□ -0.48
MCF2L-206ENST00000397021 FBXO33Q7Z6M2 555 aa12.03□□□□□ -0.48
MCF2L-206ENST00000397021 TDRD7Q8NHU6 1098 aaKnown RBP12.03□□□□□ -0.48
MCF2L-206ENST00000397021 ZNF408Q9H9D4 720 aa12.03□□□□□ -0.48
MCF2L-206ENST00000397021 PGAP2Q9UHJ9 254 aa12.03□□□□□ -0.48
MCF2L-206ENST00000397021 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.03□□□□□ -0.48
MCF2L-206ENST00000397021 SCN9AQ15858 1988 aa12.03□□□□□ -0.48
MCF2L-206ENST00000397021 FRAT2O75474 233 aaPredicted RBP12.02□□□□□ -0.49
MCF2L-206ENST00000397021 SASH1O94885 1247 aa12.02□□□□□ -0.49
MCF2L-206ENST00000397021 SLC5A1P13866 664 aa12.02□□□□□ -0.49
MCF2L-206ENST00000397021 ADORA1P30542 326 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms