RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 PTPDC1A2A3K4 754 aa27.98■■■□□ 2.07
CSNK1E-203ENST00000396832 ME1P48163 572 aa27.98■■■□□ 2.07
CSNK1E-203ENST00000396832 CLCN6P51797 869 aa27.98■■■□□ 2.07
CSNK1E-203ENST00000396832 OTUD7BQ6GQQ9 843 aa27.98■■■□□ 2.07
CSNK1E-203ENST00000396832 NEUROD6Q96NK8 337 aa27.98■■■□□ 2.07
CSNK1E-203ENST00000396832 HDAC5Q9UQL6 1122 aa27.97■■■□□ 2.07
CSNK1E-203ENST00000396832 HNRNPH2P55795 449 aaKnown RBP27.97■■■□□ 2.07
CSNK1E-203ENST00000396832 GSDMDP57764 484 aa27.97■■■□□ 2.07
CSNK1E-203ENST00000396832 SNRKQ9NRH2 765 aa27.97■■■□□ 2.07
CSNK1E-203ENST00000396832 GCP02774 474 aa27.96■■■□□ 2.07
CSNK1E-203ENST00000396832 E4F1Q66K89 784 aaPredicted RBP27.96■■■□□ 2.07
CSNK1E-203ENST00000396832 SYT10Q6XYQ8 523 aa27.96■■■□□ 2.07
CSNK1E-203ENST00000396832 ANKARQ7Z5J8 1434 aa27.96■■■□□ 2.07
CSNK1E-203ENST00000396832 AOPEPQ8N6M6 819 aa27.96■■■□□ 2.07
CSNK1E-203ENST00000396832 TRERF1Q96PN7 1200 aa27.96■■■□□ 2.07
CSNK1E-203ENST00000396832 GOLIM4O00461 696 aa27.96■■■□□ 2.07
CSNK1E-203ENST00000396832 AMOTQ4VCS5 1084 aa27.96■■■□□ 2.07
CSNK1E-203ENST00000396832 NFATC2IPQ8NCF5 419 aa27.96■■■□□ 2.07
CSNK1E-203ENST00000396832 CTDNEP1O95476 244 aa27.95■■■□□ 2.07
CSNK1E-203ENST00000396832 ORAI2Q96SN7 254 aa27.95■■■□□ 2.07
CSNK1E-203ENST00000396832 ANO10Q9NW15 660 aa27.95■■■□□ 2.07
CSNK1E-203ENST00000396832 NFAT5O94916 1531 aa27.95■■■□□ 2.06
CSNK1E-203ENST00000396832 PTPN12Q05209 780 aaKnown RBP27.95■■■□□ 2.06
CSNK1E-203ENST00000396832 SLC20A2Q08357 652 aa27.95■■■□□ 2.06
CSNK1E-203ENST00000396832 NSUN7Q8NE18 718 aaKnown RBP27.95■■■□□ 2.06
CSNK1E-203ENST00000396832 ZSCAN16Q9H4T2 348 aaPredicted RBP27.95■■■□□ 2.06
CSNK1E-203ENST00000396832 FER1L4A9Z1Z3 1794 aa27.95■■■□□ 2.06
CSNK1E-203ENST00000396832 PNMA6AP0CW24 399 aaPredicted RBP27.94■■■□□ 2.06
CSNK1E-203ENST00000396832 MAPK8IP2Q13387 824 aaPredicted RBP27.94■■■□□ 2.06
CSNK1E-203ENST00000396832 KRT32Q14532 448 aa27.94■■■□□ 2.06
CSNK1E-203ENST00000396832 CCDC73Q6ZRK6 1079 aa27.94■■■□□ 2.06
CSNK1E-203ENST00000396832 PPP1R13BQ96KQ4 1090 aa27.94■■■□□ 2.06
CSNK1E-203ENST00000396832 FMNL2Q96PY5 1086 aa27.94■■■□□ 2.06
CSNK1E-203ENST00000396832 ADD1P35611 737 aaKnown RBP27.94■■■□□ 2.06
CSNK1E-203ENST00000396832 ZC3H6P61129 1189 aaKnown RBP27.94■■■□□ 2.06
CSNK1E-203ENST00000396832 CCDC93Q567U6 631 aa27.94■■■□□ 2.06
CSNK1E-203ENST00000396832 NBPF11Q86T75 865 aa27.94■■■□□ 2.06
CSNK1E-203ENST00000396832 FSIP1Q8NA03 581 aa27.94■■■□□ 2.06
CSNK1E-203ENST00000396832 IPO4Q8TEX9 1081 aaKnown RBP27.94■■■□□ 2.06
CSNK1E-203ENST00000396832 GPHNQ9NQX3 736 aaPredicted RBP27.94■■■□□ 2.06
CSNK1E-203ENST00000396832 KINO60870 393 aaKnown RBP27.94■■■□□ 2.06
CSNK1E-203ENST00000396832 PLA2G4AP47712 749 aa27.94■■■□□ 2.06
CSNK1E-203ENST00000396832 ARHGAP29Q52LW3 1261 aa27.94■■■□□ 2.06
CSNK1E-203ENST00000396832 ZNF790Q6PG37 636 aa27.94■■■□□ 2.06
CSNK1E-203ENST00000396832 MCMDC2Q4G0Z9 681 aa27.93■■■□□ 2.06
CSNK1E-203ENST00000396832 USPL1Q5W0Q7 1092 aa27.93■■■□□ 2.06
CSNK1E-203ENST00000396832 LMO7Q8WWI1 1683 aa27.93■■■□□ 2.06
CSNK1E-203ENST00000396832 OSBPL5Q9H0X9 879 aaPredicted RBP27.93■■■□□ 2.06
CSNK1E-203ENST00000396832 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.93■■■□□ 2.06
CSNK1E-203ENST00000396832 UTYO14607 1347 aa27.92■■■□□ 2.06
CSNK1E-203ENST00000396832 A0A1B0GVL5 298 aa27.92■■■□□ 2.06
CSNK1E-203ENST00000396832 BIN1O00499 593 aa27.92■■■□□ 2.06
CSNK1E-203ENST00000396832 CEP57L1Q8IYX8 460 aa27.92■■■□□ 2.06
CSNK1E-203ENST00000396832 ATP5JP18859 108 aa27.92■■■□□ 2.06
CSNK1E-203ENST00000396832 ZNF496Q96IT1 587 aaPredicted RBP27.92■■■□□ 2.06
CSNK1E-203ENST00000396832 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.92■■■□□ 2.062e-6■■□□□ 11.5
CSNK1E-203ENST00000396832 KCNH5Q8NCM2 988 aa27.91■■■□□ 2.06
CSNK1E-203ENST00000396832 GJB4Q9NTQ9 266 aa27.91■■■□□ 2.06
CSNK1E-203ENST00000396832 TIMM10P62072 90 aa27.91■■■□□ 2.06
CSNK1E-203ENST00000396832 TSGA10IPQ3SY00 556 aa27.91■■■□□ 2.06
CSNK1E-203ENST00000396832 ISM2Q6H9L7 571 aa27.91■■■□□ 2.06
CSNK1E-203ENST00000396832 RCOR1Q9UKL0 485 aa27.91■■■□□ 2.06
CSNK1E-203ENST00000396832 U3KPZ7 1027 aaPredicted RBP27.91■■■□□ 2.06
CSNK1E-203ENST00000396832 TTLL5Q6EMB2 1281 aa27.9■■■□□ 2.06
CSNK1E-203ENST00000396832 IMPACTQ9P2X3 320 aa27.9■■■□□ 2.06
CSNK1E-203ENST00000396832 A0A087WZG4 1122 aa27.9■■■□□ 2.06
CSNK1E-203ENST00000396832 JCADQ9P266 1359 aa27.9■■■□□ 2.06
CSNK1E-203ENST00000396832 POLR3DP05423 398 aaPredicted RBP27.89■■■□□ 2.06
CSNK1E-203ENST00000396832 HSP90AB3PQ58FF7 597 aa27.89■■■□□ 2.06
CSNK1E-203ENST00000396832 ANKRD13DQ6ZTN6 518 aa27.89■■■□□ 2.06
CSNK1E-203ENST00000396832 SLIT1O75093 1534 aa27.89■■■□□ 2.06
CSNK1E-203ENST00000396832 GORABQ5T7V8 394 aa27.89■■■□□ 2.06
CSNK1E-203ENST00000396832 METTL22Q9BUU2 404 aaPredicted RBP27.89■■■□□ 2.06
CSNK1E-203ENST00000396832 RFX5P48382 616 aaPredicted RBP27.88■■■□□ 2.05
CSNK1E-203ENST00000396832 HAND2P61296 217 aa27.88■■■□□ 2.05
CSNK1E-203ENST00000396832 NAT10Q9H0A0 1025 aaKnown RBP27.88■■■□□ 2.05
CSNK1E-203ENST00000396832 HEG1Q9ULI3 1381 aa27.88■■■□□ 2.05
CSNK1E-203ENST00000396832 ARMCX5Q6P1M9 558 aa27.88■■■□□ 2.05
CSNK1E-203ENST00000396832 SDF4Q9BRK5 362 aa27.88■■■□□ 2.05
CSNK1E-203ENST00000396832 PSDA5PKW4 1024 aaPredicted RBP27.88■■■□□ 2.05
CSNK1E-203ENST00000396832 LMBR1LQ6UX01 489 aa27.88■■■□□ 2.05
CSNK1E-203ENST00000396832 ILDR1Q86SU0 546 aaPredicted RBP27.88■■■□□ 2.05
CSNK1E-203ENST00000396832 POLR3GO15318 223 aaPredicted RBP27.87■■■□□ 2.05
CSNK1E-203ENST00000396832 ARHGEF25Q86VW2 580 aa27.87■■■□□ 2.05
CSNK1E-203ENST00000396832 ENGASEQ8NFI3 743 aa27.87■■■□□ 2.05
CSNK1E-203ENST00000396832 NLRP2Q9NX02 1062 aa27.87■■■□□ 2.05
CSNK1E-203ENST00000396832 ZRANB2O95218 330 aaKnown RBP eCLIP27.87■■■□□ 2.05
CSNK1E-203ENST00000396832 FAM160A1Q05DH4 1040 aa27.87■■■□□ 2.05
CSNK1E-203ENST00000396832 TMCO3Q6UWJ1 677 aa27.87■■■□□ 2.05
CSNK1E-203ENST00000396832 ARHGAP23Q9P227 1491 aa27.86■■■□□ 2.05
CSNK1E-203ENST00000396832 PFKFB2O60825 505 aa27.86■■■□□ 2.05
CSNK1E-203ENST00000396832 PTPN21Q16825 1174 aa27.86■■■□□ 2.05
CSNK1E-203ENST00000396832 DHX32Q7L7V1 743 aaKnown RBP27.86■■■□□ 2.05
CSNK1E-203ENST00000396832 TMC6Q7Z403 805 aa27.86■■■□□ 2.05
CSNK1E-203ENST00000396832 SMARCC2Q8TAQ2 1214 aa27.86■■■□□ 2.05
CSNK1E-203ENST00000396832 SMC2O95347 1197 aa27.86■■■□□ 2.05
CSNK1E-203ENST00000396832 TEX35Q5T0J7 233 aa27.86■■■□□ 2.05
CSNK1E-203ENST00000396832 CCDC150Q8NCX0 1101 aa27.86■■■□□ 2.05
CSNK1E-203ENST00000396832 UBXN4Q92575 508 aa27.86■■■□□ 2.05
CSNK1E-203ENST00000396832 COPRSQ9NQ92 184 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms