RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 VPS37CA5D8V6 355 aaPredicted RBP19.13■□□□□ 0.65
SNX6-202ENST00000396526 F13A1P00488 732 aa19.13■□□□□ 0.65
SNX6-202ENST00000396526 SPEF2Q9C093 1822 aa19.13■□□□□ 0.65
SNX6-202ENST00000396526 FOXD4L6Q3SYB3 417 aaPredicted RBP19.13■□□□□ 0.65
SNX6-202ENST00000396526 FOXD4L3Q6VB84 417 aaPredicted RBP19.13■□□□□ 0.65
SNX6-202ENST00000396526 SPATA31A6Q5VVP1 1343 aa19.13■□□□□ 0.65
SNX6-202ENST00000396526 XRCC6P12956 609 aaKnown RBP eCLIP19.13■□□□□ 0.65
SNX6-202ENST00000396526 Q6ZUG5 572 aa19.13■□□□□ 0.65
SNX6-202ENST00000396526 RGL2O15211 777 aa19.12■□□□□ 0.65
SNX6-202ENST00000396526 FNBP4Q8N3X1 1017 aaPredicted RBP19.12■□□□□ 0.65
SNX6-202ENST00000396526 PHF14O94880 888 aa19.12■□□□□ 0.65
SNX6-202ENST00000396526 MEX3CQ5U5Q3 659 aaKnown RBP19.12■□□□□ 0.65
SNX6-202ENST00000396526 BRPF3Q9ULD4 1205 aa19.12■□□□□ 0.65
SNX6-202ENST00000396526 CCDC102BQ68D86 513 aa19.12■□□□□ 0.65
SNX6-202ENST00000396526 OSBP2Q969R2 916 aa19.12■□□□□ 0.65
SNX6-202ENST00000396526 IDH1O75874 414 aaKnown RBP19.11■□□□□ 0.65
SNX6-202ENST00000396526 CHGBP05060 677 aa19.11■□□□□ 0.65
SNX6-202ENST00000396526 STK3Q13188 491 aa19.11■□□□□ 0.65
SNX6-202ENST00000396526 TOB2Q14106 344 aaPredicted RBP19.11■□□□□ 0.65
SNX6-202ENST00000396526 SLC9C2Q5TAH2 1124 aa19.11■□□□□ 0.65
SNX6-202ENST00000396526 VGLL2Q8N8G2 317 aa19.11■□□□□ 0.65
SNX6-202ENST00000396526 NUP98P52948 1817 aa19.11■□□□□ 0.65
SNX6-202ENST00000396526 RIC1Q4ADV7 1423 aa19.1■□□□□ 0.65
SNX6-202ENST00000396526 ZNF445P59923 1031 aa19.1■□□□□ 0.65
SNX6-202ENST00000396526 MAP3K12Q12852 859 aa19.1■□□□□ 0.65
SNX6-202ENST00000396526 FAM184AQ8NB25 1140 aa19.1■□□□□ 0.65
SNX6-202ENST00000396526 MCAMP43121 646 aa19.1■□□□□ 0.65
SNX6-202ENST00000396526 TRDNQ13061 729 aa19.1■□□□□ 0.65
SNX6-202ENST00000396526 SCARF1Q14162 830 aa19.1■□□□□ 0.65
SNX6-202ENST00000396526 RALYLQ86SE5 291 aaKnown RBP19.1■□□□□ 0.65
SNX6-202ENST00000396526 HELBQ8NG08 1087 aaPredicted RBP19.1■□□□□ 0.65
SNX6-202ENST00000396526 BRF1Q92994 677 aa19.1■□□□□ 0.65
SNX6-202ENST00000396526 ANKRD36CQ5JPF3 1778 aa19.1■□□□□ 0.65
SNX6-202ENST00000396526 NTSR2O95665 410 aa19.09■□□□□ 0.65
SNX6-202ENST00000396526 UBE3CQ15386 1083 aa19.09■□□□□ 0.65
SNX6-202ENST00000396526 ZSCAN23Q3MJ62 389 aa19.09■□□□□ 0.65
SNX6-202ENST00000396526 TAF6LQ9Y6J9 622 aa19.09■□□□□ 0.65
SNX6-202ENST00000396526 E7EWF7 191 aa19.09■□□□□ 0.65
SNX6-202ENST00000396526 M0R2C6 588 aa19.09■□□□□ 0.65
SNX6-202ENST00000396526 CNTNAP4Q9C0A0 1308 aa19.09■□□□□ 0.65
SNX6-202ENST00000396526 RTL9Q8NET4 1388 aa19.09■□□□□ 0.65
SNX6-202ENST00000396526 ZNF213O14771 459 aa19.09■□□□□ 0.65
SNX6-202ENST00000396526 ARID4AP29374 1257 aaPredicted RBP19.09■□□□□ 0.65
SNX6-202ENST00000396526 RC3H1Q5TC82 1133 aaKnown RBP19.09■□□□□ 0.65
SNX6-202ENST00000396526 NYXQ9GZU5 481 aa19.09■□□□□ 0.65
SNX6-202ENST00000396526 NAP1L2Q9ULW6 460 aaPredicted RBP19.09■□□□□ 0.65
SNX6-202ENST00000396526 MTMR6Q9Y217 621 aa19.09■□□□□ 0.65
SNX6-202ENST00000396526 GPAA1O43292 621 aa19.08■□□□□ 0.65
SNX6-202ENST00000396526 ZPR1O75312 459 aa19.08■□□□□ 0.65
SNX6-202ENST00000396526 GTF3C6Q969F1 213 aa19.08■□□□□ 0.65
SNX6-202ENST00000396526 LLPHQ9BRT6 129 aaKnown RBP19.08■□□□□ 0.65
SNX6-202ENST00000396526 APPP05067 770 aa19.08■□□□□ 0.64
SNX6-202ENST00000396526 PHKA1P46020 1223 aa19.08■□□□□ 0.64
SNX6-202ENST00000396526 USP48Q86UV5 1035 aa19.08■□□□□ 0.64
SNX6-202ENST00000396526 ANKRD18AQ8IVF6 992 aa19.08■□□□□ 0.64
SNX6-202ENST00000396526 GNL3LQ9NVN8 582 aaKnown RBP19.08■□□□□ 0.64
SNX6-202ENST00000396526 ADD2P35612 726 aa19.07■□□□□ 0.64
SNX6-202ENST00000396526 SLFNL1Q499Z3 407 aa19.07■□□□□ 0.64
SNX6-202ENST00000396526 GPT2Q8TD30 523 aa19.07■□□□□ 0.64
SNX6-202ENST00000396526 H3BQV1 296 aa19.07■□□□□ 0.64
SNX6-202ENST00000396526 FGFR2P21802 821 aa19.07■□□□□ 0.64
SNX6-202ENST00000396526 HMGN5P82970 282 aaKnown RBP19.07■□□□□ 0.64
SNX6-202ENST00000396526 IFFO2Q5TF58 517 aa19.07■□□□□ 0.64
SNX6-202ENST00000396526 SEC31BQ9NQW1 1179 aa19.07■□□□□ 0.64
SNX6-202ENST00000396526 TMEM87AQ8NBN3 555 aa19.07■□□□□ 0.64
SNX6-202ENST00000396526 BCL9LQ86UU0 1499 aa19.06■□□□□ 0.64
SNX6-202ENST00000396526 KRT85P78386 507 aa19.06■□□□□ 0.64
SNX6-202ENST00000396526 PI16Q6UXB8 463 aa19.06■□□□□ 0.64
SNX6-202ENST00000396526 SPATA5Q8NB90 893 aa19.06■□□□□ 0.64
SNX6-202ENST00000396526 LINC00116Q8NCU8 138 aa19.06■□□□□ 0.64
SNX6-202ENST00000396526 AIDAQ96BJ3 306 aa19.06■□□□□ 0.64
SNX6-202ENST00000396526 SETDB2Q96T68 719 aa19.06■□□□□ 0.64
SNX6-202ENST00000396526 MYH3P11055 1940 aa19.06■□□□□ 0.64
SNX6-202ENST00000396526 RPS6KA4O75676 772 aa19.06■□□□□ 0.64
SNX6-202ENST00000396526 FGAP02671 866 aa19.06■□□□□ 0.64
SNX6-202ENST00000396526 UBE2HP62256 183 aa19.06■□□□□ 0.64
SNX6-202ENST00000396526 NCOA7Q8NI08 942 aa19.06■□□□□ 0.64
SNX6-202ENST00000396526 NPHP1O15259 732 aa19.05■□□□□ 0.64
SNX6-202ENST00000396526 MCM5P33992 734 aa19.05■□□□□ 0.64
SNX6-202ENST00000396526 RTCBQ9Y3I0 505 aaKnown RBP19.05■□□□□ 0.64
SNX6-202ENST00000396526 FIBPO43427 364 aa19.05■□□□□ 0.64
SNX6-202ENST00000396526 DHX16O60231 1041 aaKnown RBP19.05■□□□□ 0.64
SNX6-202ENST00000396526 BICDL1Q6ZP65 573 aa19.05■□□□□ 0.64
SNX6-202ENST00000396526 PUS7LQ9H0K6 701 aaKnown RBP19.05■□□□□ 0.64
SNX6-202ENST00000396526 CCNL1Q9UK58 526 aaPredicted RBP19.05■□□□□ 0.64
SNX6-202ENST00000396526 PFKFB2O60825 505 aa19.04■□□□□ 0.64
SNX6-202ENST00000396526 STOX1Q6ZVD7 989 aa19.04■□□□□ 0.64
SNX6-202ENST00000396526 CHAMP1Q96JM3 812 aa19.04■□□□□ 0.64
SNX6-202ENST00000396526 LRRC2Q9BYS8 371 aa19.04■□□□□ 0.64
SNX6-202ENST00000396526 GDPD2Q9HCC8 539 aa19.04■□□□□ 0.64
SNX6-202ENST00000396526 CNPY2Q9Y2B0 182 aa19.04■□□□□ 0.64
SNX6-202ENST00000396526 LETM1O95202 739 aaPredicted RBP19.04■□□□□ 0.64
SNX6-202ENST00000396526 EXOSC10Q01780 885 aaKnown RBP19.04■□□□□ 0.64
SNX6-202ENST00000396526 ZNF274Q96GC6 653 aaPredicted RBP19.04■□□□□ 0.64
SNX6-202ENST00000396526 NARFQ9UHQ1 456 aa19.04■□□□□ 0.64
SNX6-202ENST00000396526 NASPP49321 788 aaPredicted RBP19.04■□□□□ 0.64
SNX6-202ENST00000396526 SF3B3Q15393 1217 aaKnown RBP19.04■□□□□ 0.64
SNX6-202ENST00000396526 GAS2L3Q86XJ1 694 aa19.04■□□□□ 0.64
SNX6-202ENST00000396526 GOLGA6L4A6NEF3 574 aa19.03■□□□□ 0.64
SNX6-202ENST00000396526 PDE6AP16499 860 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms