RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 SLIT2O94813 1529 aa18.85■□□□□ 0.61
CCHCR1-202ENST00000396263 AGXT2Q9BYV1 514 aa18.84■□□□□ 0.61
CCHCR1-202ENST00000396263 TNMDQ9H2S6 317 aa18.84■□□□□ 0.61
CCHCR1-202ENST00000396263 EYA2O00167 538 aa18.84■□□□□ 0.61
CCHCR1-202ENST00000396263 CIAO1O76071 339 aa18.84■□□□□ 0.61
CCHCR1-202ENST00000396263 DMTNQ08495 405 aa18.84■□□□□ 0.61
CCHCR1-202ENST00000396263 CLSTN2Q9H4D0 955 aa18.84■□□□□ 0.61
CCHCR1-202ENST00000396263 TPM3P06753 285 aa18.83■□□□□ 0.61
CCHCR1-202ENST00000396263 FGD1P98174 961 aa18.83■□□□□ 0.61
CCHCR1-202ENST00000396263 NOLC1Q14978 699 aaKnown RBP eCLIP18.83■□□□□ 0.61
CCHCR1-202ENST00000396263 MPNDQ8N594 471 aa18.83■□□□□ 0.61
CCHCR1-202ENST00000396263 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.83■□□□□ 0.61
CCHCR1-202ENST00000396263 H3BQV1 296 aa18.83■□□□□ 0.6
CCHCR1-202ENST00000396263 ZSCAN20P17040 1043 aaPredicted RBP18.83■□□□□ 0.6
CCHCR1-202ENST00000396263 TIMM10P62072 90 aa18.83■□□□□ 0.6
CCHCR1-202ENST00000396263 EXOSC10Q01780 885 aaKnown RBP18.83■□□□□ 0.6
CCHCR1-202ENST00000396263 CAMK4Q16566 473 aa18.83■□□□□ 0.6
CCHCR1-202ENST00000396263 IFFO2Q5TF58 517 aa18.83■□□□□ 0.6
CCHCR1-202ENST00000396263 PGBD1Q96JS3 809 aa18.83■□□□□ 0.6
CCHCR1-202ENST00000396263 CCDC94Q9BW85 323 aaPredicted RBP18.83■□□□□ 0.6
CCHCR1-202ENST00000396263 SPTLC3Q9NUV7 552 aa18.83■□□□□ 0.6
CCHCR1-202ENST00000396263 A1BGP04217 495 aa18.82■□□□□ 0.6
CCHCR1-202ENST00000396263 ITGB4P16144 1822 aa18.82■□□□□ 0.6
CCHCR1-202ENST00000396263 SPATA31A1Q5TZJ5 1347 aa18.82■□□□□ 0.6
CCHCR1-202ENST00000396263 TNS2Q63HR2 1409 aa18.82■□□□□ 0.6
CCHCR1-202ENST00000396263 NSUN7Q8NE18 718 aaKnown RBP18.82■□□□□ 0.6
CCHCR1-202ENST00000396263 LRRC2Q9BYS8 371 aa18.82■□□□□ 0.6
CCHCR1-202ENST00000396263 CFAP45Q9UL16 551 aa18.82■□□□□ 0.6
CCHCR1-202ENST00000396263 HMGN5P82970 282 aaKnown RBP18.81■□□□□ 0.6
CCHCR1-202ENST00000396263 PLCB2Q00722 1185 aa18.81■□□□□ 0.6
CCHCR1-202ENST00000396263 LRRC24Q50LG9 513 aa18.81■□□□□ 0.6
CCHCR1-202ENST00000396263 UTP14CQ5TAP6 766 aaKnown RBP18.81■□□□□ 0.6
CCHCR1-202ENST00000396263 NAA16Q6N069 864 aaPredicted RBP18.81■□□□□ 0.6
CCHCR1-202ENST00000396263 CCDC9Q9Y3X0 531 aaKnown RBP18.81■□□□□ 0.6
CCHCR1-202ENST00000396263 IFIT1P09914 478 aaKnown RBP18.81■□□□□ 0.6
CCHCR1-202ENST00000396263 HSPD1P10809 573 aaKnown RBP18.81■□□□□ 0.6
CCHCR1-202ENST00000396263 A0A1B0GUL7 405 aa18.8■□□□□ 0.6
CCHCR1-202ENST00000396263 RNF113AO15541 343 aaKnown RBP18.8■□□□□ 0.6
CCHCR1-202ENST00000396263 NR1I2O75469 434 aa18.8■□□□□ 0.6
CCHCR1-202ENST00000396263 DDX11Q96FC9 970 aa18.8■□□□□ 0.6
CCHCR1-202ENST00000396263 MAST3O60307 1309 aa18.8■□□□□ 0.6
CCHCR1-202ENST00000396263 SLFNL1Q499Z3 407 aa18.8■□□□□ 0.6
CCHCR1-202ENST00000396263 CKAP2LQ8IYA6 745 aa18.8■□□□□ 0.6
CCHCR1-202ENST00000396263 ZBTB3Q9H5J0 574 aa18.8■□□□□ 0.6
CCHCR1-202ENST00000396263 KIF3AQ9Y496 699 aa18.8■□□□□ 0.6
CCHCR1-202ENST00000396263 GOLGA6L6A8MZA4 724 aa18.79■□□□□ 0.6
CCHCR1-202ENST00000396263 E7EWF7 191 aa18.79■□□□□ 0.6
CCHCR1-202ENST00000396263 CTDNEP1O95476 244 aa18.79■□□□□ 0.6
CCHCR1-202ENST00000396263 BICD2Q8TD16 824 aa18.79■□□□□ 0.6
CCHCR1-202ENST00000396263 ZNF594Q96JF6 807 aaPredicted RBP18.79■□□□□ 0.6
CCHCR1-202ENST00000396263 LRP6O75581 1613 aa18.79■□□□□ 0.6
CCHCR1-202ENST00000396263 ADD1P35611 737 aaKnown RBP18.79■□□□□ 0.6
CCHCR1-202ENST00000396263 ANO6Q4KMQ2 910 aa18.79■□□□□ 0.6
CCHCR1-202ENST00000396263 FBXO3Q9UK99 471 aa18.79■□□□□ 0.6
CCHCR1-202ENST00000396263 SPATA31A5Q5VU36 1347 aa18.78■□□□□ 0.6
CCHCR1-202ENST00000396263 SPATA31A7Q8IWB4 1347 aa18.78■□□□□ 0.6
CCHCR1-202ENST00000396263 SALL1Q9NSC2 1324 aa18.78■□□□□ 0.6
CCHCR1-202ENST00000396263 APOBRQ0VD83 1088 aa18.78■□□□□ 0.6
CCHCR1-202ENST00000396263 FBXL16Q8N461 479 aa18.78■□□□□ 0.6
CCHCR1-202ENST00000396263 PRIMPOLQ96LW4 560 aa18.78■□□□□ 0.6
CCHCR1-202ENST00000396263 ISCA1Q9BUE6 129 aa18.78■□□□□ 0.6
CCHCR1-202ENST00000396263 KCNF1Q9H3M0 494 aa18.78■□□□□ 0.6
CCHCR1-202ENST00000396263 CBX8Q9HC52 389 aa18.78■□□□□ 0.6
CCHCR1-202ENST00000396263 PTPDC1A2A3K4 754 aa18.78■□□□□ 0.6
CCHCR1-202ENST00000396263 DNTTIP2Q5QJE6 756 aaKnown RBP18.78■□□□□ 0.6
CCHCR1-202ENST00000396263 LUZP1Q86V48 1076 aa18.78■□□□□ 0.6
CCHCR1-202ENST00000396263 TSC1Q92574 1164 aa18.78■□□□□ 0.6
CCHCR1-202ENST00000396263 ZNF274Q96GC6 653 aaPredicted RBP18.78■□□□□ 0.6
CCHCR1-202ENST00000396263 KAT6BQ8WYB5 2073 aa18.78■□□□□ 0.6
CCHCR1-202ENST00000396263 ATL3Q6DD88 541 aa18.77■□□□□ 0.6
CCHCR1-202ENST00000396263 KIAA1524Q8TCG1 905 aa18.77■□□□□ 0.6
CCHCR1-202ENST00000396263 CHMP4CQ96CF2 233 aa18.77■□□□□ 0.6
CCHCR1-202ENST00000396263 RCOR1Q9UKL0 485 aa18.77■□□□□ 0.6
CCHCR1-202ENST00000396263 CAVIN2O95810 425 aa18.77■□□□□ 0.59
CCHCR1-202ENST00000396263 MYRIPQ8NFW9 859 aa18.77■□□□□ 0.59
CCHCR1-202ENST00000396263 TDRD7Q8NHU6 1098 aaKnown RBP18.77■□□□□ 0.59
CCHCR1-202ENST00000396263 C8orf37Q96NL8 207 aa18.77■□□□□ 0.59
CCHCR1-202ENST00000396263 PUS3Q9BZE2 481 aaKnown RBP18.77■□□□□ 0.59
CCHCR1-202ENST00000396263 CEP126Q9P2H0 1117 aa18.77■□□□□ 0.59
CCHCR1-202ENST00000396263 DOT1LQ8TEK3 1739 aa18.76■□□□□ 0.59
CCHCR1-202ENST00000396263 EXOC5O00471 708 aa18.76■□□□□ 0.59
CCHCR1-202ENST00000396263 LRRFIP1Q32MZ4 808 aaKnown RBP18.76■□□□□ 0.59
CCHCR1-202ENST00000396263 M0R2C6 588 aa18.76■□□□□ 0.59
CCHCR1-202ENST00000396263 THRAP3Q9Y2W1 955 aaKnown RBP18.76■□□□□ 0.59
CCHCR1-202ENST00000396263 BCL9LQ86UU0 1499 aa18.76■□□□□ 0.59
CCHCR1-202ENST00000396263 A0A0G2JLW4 131 aa18.75■□□□□ 0.59
CCHCR1-202ENST00000396263 TRIM28Q13263 835 aaKnown RBP18.75■□□□□ 0.59
CCHCR1-202ENST00000396263 ZNF710Q8N1W2 664 aa18.75■□□□□ 0.59
CCHCR1-202ENST00000396263 C17orf53Q8N3J3 647 aaPredicted RBP18.75■□□□□ 0.59
CCHCR1-202ENST00000396263 TMOD3Q9NYL9 352 aa18.75■□□□□ 0.59
CCHCR1-202ENST00000396263 PDIA3P30101 505 aaKnown RBP18.75■□□□□ 0.59
CCHCR1-202ENST00000396263 EVCP57679 992 aa18.75■□□□□ 0.59
CCHCR1-202ENST00000396263 TCIRG1Q13488 830 aa18.75■□□□□ 0.59
CCHCR1-202ENST00000396263 CCDC57Q2TAC2 916 aa18.75■□□□□ 0.59
CCHCR1-202ENST00000396263 SPC24Q8NBT2 197 aa18.75■□□□□ 0.59
CCHCR1-202ENST00000396263 OSBP2Q969R2 916 aa18.75■□□□□ 0.59
CCHCR1-202ENST00000396263 AKAP2Q9Y2D5 859 aa18.75■□□□□ 0.59
CCHCR1-202ENST00000396263 ZFYP08048 801 aaPredicted RBP18.74■□□□□ 0.59
CCHCR1-202ENST00000396263 CCDC158Q5M9N0 1113 aa18.74■□□□□ 0.59
CCHCR1-202ENST00000396263 PIGBQ92521 554 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms