RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 COL4A1P02462 1669 aa10.76□□□□□ -0.69
CCR9-203ENST00000395963 SMARCA5O60264 1052 aaPredicted RBP10.76□□□□□ -0.69
CCR9-203ENST00000395963 PI4K2BQ8TCG2 481 aa10.76□□□□□ -0.69
CCR9-203ENST00000395963 XAGE2Q96GT9 111 aa10.76□□□□□ -0.69
CCR9-203ENST00000395963 PIM2Q9P1W9 311 aa10.76□□□□□ -0.69
CCR9-203ENST00000395963 GGA1Q9UJY5 639 aa10.76□□□□□ -0.69
CCR9-203ENST00000395963 EPB41L2O43491 1005 aaKnown RBP10.76□□□□□ -0.69
CCR9-203ENST00000395963 KCNJ4P48050 445 aa10.76□□□□□ -0.69
CCR9-203ENST00000395963 TTF1Q15361 905 aaPredicted RBP10.76□□□□□ -0.69
CCR9-203ENST00000395963 PRPF40BQ6NWY9 871 aaKnown RBP10.76□□□□□ -0.69
CCR9-203ENST00000395963 CNTROBQ8N137 903 aa10.76□□□□□ -0.69
CCR9-203ENST00000395963 APBB1O00213 710 aa10.75□□□□□ -0.69
CCR9-203ENST00000395963 CCDC93Q567U6 631 aa10.75□□□□□ -0.69
CCR9-203ENST00000395963 GORABQ5T7V8 394 aa10.75□□□□□ -0.69
CCR9-203ENST00000395963 CASC1Q6TDU7 716 aa10.75□□□□□ -0.69
CCR9-203ENST00000395963 EVI5LQ96CN4 794 aa10.75□□□□□ -0.69
CCR9-203ENST00000395963 PKNOX2Q96KN3 472 aa10.75□□□□□ -0.69
CCR9-203ENST00000395963 PSMD1Q99460 953 aa10.75□□□□□ -0.69
CCR9-203ENST00000395963 HAUS7Q99871 368 aa10.75□□□□□ -0.69
CCR9-203ENST00000395963 ATF5Q9Y2D1 282 aaPredicted RBP10.75□□□□□ -0.69
CCR9-203ENST00000395963 LTBP3Q9NS15 1303 aa10.75□□□□□ -0.69
CCR9-203ENST00000395963 IRS2Q9Y4H2 1338 aa10.75□□□□□ -0.69
CCR9-203ENST00000395963 ZNF804AQ7Z570 1209 aa10.75□□□□□ -0.69
CCR9-203ENST00000395963 C7orf43Q8WVR3 580 aa10.75□□□□□ -0.69
CCR9-203ENST00000395963 ZNF622Q969S3 477 aaKnown RBP eCLIP10.75□□□□□ -0.69
CCR9-203ENST00000395963 PSDA5PKW4 1024 aaPredicted RBP10.74□□□□□ -0.69
CCR9-203ENST00000395963 ANP32AP39687 249 aaKnown RBP10.74□□□□□ -0.69
CCR9-203ENST00000395963 RGS3P49796 1198 aa10.74□□□□□ -0.69
CCR9-203ENST00000395963 TTC39AQ5SRH9 613 aa10.74□□□□□ -0.69
CCR9-203ENST00000395963 FBXO33Q7Z6M2 555 aa10.74□□□□□ -0.69
CCR9-203ENST00000395963 CCDC24Q8N4L8 307 aa10.74□□□□□ -0.69
CCR9-203ENST00000395963 MPNDQ8N594 471 aa10.74□□□□□ -0.69
CCR9-203ENST00000395963 NEUROD6Q96NK8 337 aa10.74□□□□□ -0.69
CCR9-203ENST00000395963 DBNDD2Q9BQY9 259 aa10.74□□□□□ -0.69
CCR9-203ENST00000395963 ANKIB1Q9P2G1 1089 aa10.74□□□□□ -0.69
CCR9-203ENST00000395963 DENND2AQ9ULE3 1009 aa10.74□□□□□ -0.69
CCR9-203ENST00000395963 ZGPATQ8N5A5 531 aaKnown RBP10.74□□□□□ -0.69
CCR9-203ENST00000395963 SALL1Q9NSC2 1324 aa10.73□□□□□ -0.69
CCR9-203ENST00000395963 MAST2Q6P0Q8 1798 aa10.73□□□□□ -0.69
CCR9-203ENST00000395963 DPEP1P16444 411 aa10.73□□□□□ -0.69
CCR9-203ENST00000395963 TAF1P21675 1872 aa10.73□□□□□ -0.69
CCR9-203ENST00000395963 KCNA3P22001 575 aa10.73□□□□□ -0.69
CCR9-203ENST00000395963 DALRD3Q5D0E6 543 aaKnown RBP10.73□□□□□ -0.69
CCR9-203ENST00000395963 DPP8Q6V1X1 898 aaPredicted RBP10.73□□□□□ -0.69
CCR9-203ENST00000395963 CCDC8Q9H0W5 538 aaPredicted RBP10.73□□□□□ -0.69
CCR9-203ENST00000395963 RAD50Q92878 1312 aa10.73□□□□□ -0.69
CCR9-203ENST00000395963 SLX4Q8IY92 1834 aa10.73□□□□□ -0.69
CCR9-203ENST00000395963 DOCK2Q92608 1830 aa10.73□□□□□ -0.69
CCR9-203ENST00000395963 CDC45O75419 566 aa10.73□□□□□ -0.69
CCR9-203ENST00000395963 ZFYP08048 801 aaPredicted RBP10.73□□□□□ -0.69
CCR9-203ENST00000395963 GPSM2P81274 684 aa10.73□□□□□ -0.69
CCR9-203ENST00000395963 CCDC102BQ68D86 513 aa10.73□□□□□ -0.69
CCR9-203ENST00000395963 ZSCAN25Q6NSZ9 544 aa10.73□□□□□ -0.69
CCR9-203ENST00000395963 C16orf71Q8IYS4 520 aaPredicted RBP10.73□□□□□ -0.69
CCR9-203ENST00000395963 TBC1D16Q8TBP0 767 aa10.73□□□□□ -0.69
CCR9-203ENST00000395963 COA1Q9GZY4 146 aa10.73□□□□□ -0.69
CCR9-203ENST00000395963 CACNA1SQ13698 1873 aa10.72□□□□□ -0.69
CCR9-203ENST00000395963 AK9Q5TCS8 1911 aa10.72□□□□□ -0.69
CCR9-203ENST00000395963 HIBADHP31937 336 aaKnown RBP10.72□□□□□ -0.69
CCR9-203ENST00000395963 MMP14P50281 582 aa10.72□□□□□ -0.69
CCR9-203ENST00000395963 TIMM10P62072 90 aa10.72□□□□□ -0.69
CCR9-203ENST00000395963 FKBP1AP62942 108 aaKnown RBP10.72□□□□□ -0.69
CCR9-203ENST00000395963 SUGT1Q9Y2Z0 365 aa10.72□□□□□ -0.69
CCR9-203ENST00000395963 MYH13Q9UKX3 1938 aa10.72□□□□□ -0.69
CCR9-203ENST00000395963 UFL1O94874 794 aa10.72□□□□□ -0.69
CCR9-203ENST00000395963 IL1R1P14778 569 aa10.72□□□□□ -0.69
CCR9-203ENST00000395963 GSPT1P15170 499 aaKnown RBP10.72□□□□□ -0.69
CCR9-203ENST00000395963 IPO9Q96P70 1041 aaKnown RBP10.72□□□□□ -0.69
CCR9-203ENST00000395963 NSFL1CQ9UNZ2 370 aaKnown RBP10.72□□□□□ -0.69
CCR9-203ENST00000395963 CHRNA5P30532 468 aa10.71□□□□□ -0.69
CCR9-203ENST00000395963 VPS37DQ86XT2 251 aa10.71□□□□□ -0.69
CCR9-203ENST00000395963 OTUD7AQ8TE49 926 aaPredicted RBP10.71□□□□□ -0.69
CCR9-203ENST00000395963 TBC1D22AQ8WUA7 517 aa10.71□□□□□ -0.69
CCR9-203ENST00000395963 RUFY2Q8WXA3 655 aa10.71□□□□□ -0.69
CCR9-203ENST00000395963 TLR7Q9NYK1 1049 aaKnown RBP10.71□□□□□ -0.69
CCR9-203ENST00000395963 FER1L6Q2WGJ9 1857 aa10.71□□□□□ -0.7
CCR9-203ENST00000395963 AKAP11Q9UKA4 1901 aa10.71□□□□□ -0.7
CCR9-203ENST00000395963 TAF5LO75529 589 aa10.71□□□□□ -0.7
CCR9-203ENST00000395963 FKBP4Q02790 459 aaKnown RBP eCLIP10.71□□□□□ -0.7
CCR9-203ENST00000395963 PODNQ7Z5L7 613 aa10.71□□□□□ -0.7
CCR9-203ENST00000395963 CERS3Q8IU89 383 aa10.71□□□□□ -0.7
CCR9-203ENST00000395963 KBTBD3Q8NAB2 608 aa10.71□□□□□ -0.7
CCR9-203ENST00000395963 TDRD7Q8NHU6 1098 aaKnown RBP10.71□□□□□ -0.7
CCR9-203ENST00000395963 FAM84BQ96KN1 310 aaPredicted RBP10.71□□□□□ -0.7
CCR9-203ENST00000395963 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.71□□□□□ -0.7
CCR9-203ENST00000395963 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.71□□□□□ -0.7
CCR9-203ENST00000395963 SDSP20132 328 aa10.7□□□□□ -0.7
CCR9-203ENST00000395963 SPTY2D1Q68D10 685 aaPredicted RBP10.7□□□□□ -0.7
CCR9-203ENST00000395963 WDR66Q8TBY9 1149 aa10.7□□□□□ -0.7
CCR9-203ENST00000395963 ZC3H12CQ9C0D7 883 aaKnown RBP10.7□□□□□ -0.7
CCR9-203ENST00000395963 PAG1Q9NWQ8 432 aa10.7□□□□□ -0.7
CCR9-203ENST00000395963 FAM205AQ6ZU69 1335 aa10.7□□□□□ -0.7
CCR9-203ENST00000395963 PSME4Q14997 1843 aa10.7□□□□□ -0.7
CCR9-203ENST00000395963 KIAA2012Q0VF49 1180 aa10.69□□□□□ -0.7
CCR9-203ENST00000395963 SPATA5Q8NB90 893 aa10.69□□□□□ -0.7
CCR9-203ENST00000395963 HELBQ8NG08 1087 aaPredicted RBP10.69□□□□□ -0.7
CCR9-203ENST00000395963 SNRKQ9NRH2 765 aa10.69□□□□□ -0.7
CCR9-203ENST00000395963 ADORA1P30542 326 aa10.69□□□□□ -0.7
CCR9-203ENST00000395963 MFAP1P55081 439 aaKnown RBP10.69□□□□□ -0.7
CCR9-203ENST00000395963 PHKA1P46020 1223 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms