RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 DACT2Q5SW24 774 aa18.05■□□□□ 0.48
VCPKMT-201ENST00000395859 PTPN18Q99952 460 aa18.05■□□□□ 0.48
VCPKMT-201ENST00000395859 FZD1Q9UP38 647 aa18.05■□□□□ 0.48
VCPKMT-201ENST00000395859 TESPA1A2RU30 521 aaPredicted RBP18.04■□□□□ 0.48
VCPKMT-201ENST00000395859 SP3Q02447 781 aa18.04■□□□□ 0.48
VCPKMT-201ENST00000395859 AIMP1Q12904 312 aaKnown RBP18.04■□□□□ 0.48
VCPKMT-201ENST00000395859 PRKG1Q13976 671 aa18.04■□□□□ 0.48
VCPKMT-201ENST00000395859 CLMNQ96JQ2 1002 aa18.04■□□□□ 0.48
VCPKMT-201ENST00000395859 SEC31BQ9NQW1 1179 aa18.04■□□□□ 0.48
VCPKMT-201ENST00000395859 ANGEL1Q9UNK9 670 aaKnown RBP18.04■□□□□ 0.48
VCPKMT-201ENST00000395859 COL1A1P02452 1464 aaPredicted RBP18.03■□□□□ 0.48
VCPKMT-201ENST00000395859 PPP2R1AP30153 589 aa18.03■□□□□ 0.48
VCPKMT-201ENST00000395859 GJA5P36382 358 aa18.03■□□□□ 0.48
VCPKMT-201ENST00000395859 MXD3Q9BW11 206 aa18.03■□□□□ 0.48
VCPKMT-201ENST00000395859 ANKIB1Q9P2G1 1089 aa18.03■□□□□ 0.48
VCPKMT-201ENST00000395859 PTCH2Q9Y6C5 1203 aa18.03■□□□□ 0.48
VCPKMT-201ENST00000395859 SPTBN5Q9NRC6 3674 aaKnown RBP18.03■□□□□ 0.48
VCPKMT-201ENST00000395859 UNCXA6NJT0 531 aa18.02■□□□□ 0.48
VCPKMT-201ENST00000395859 TRIM28Q13263 835 aaKnown RBP18.02■□□□□ 0.48
VCPKMT-201ENST00000395859 CNGB1Q14028 1251 aaPredicted RBP18.02■□□□□ 0.48
VCPKMT-201ENST00000395859 NFE2L2Q16236 605 aa18.02■□□□□ 0.48
VCPKMT-201ENST00000395859 SLC10A4Q96EP9 437 aa18.02■□□□□ 0.48
VCPKMT-201ENST00000395859 WTIPA6NIX2 430 aaPredicted RBP18.01■□□□□ 0.47
VCPKMT-201ENST00000395859 G3V3G9 751 aa18.01■□□□□ 0.47
VCPKMT-201ENST00000395859 IRS4O14654 1257 aaPredicted RBP18.01■□□□□ 0.47
VCPKMT-201ENST00000395859 SASH1O94885 1247 aa18.01■□□□□ 0.47
VCPKMT-201ENST00000395859 MMP14P50281 582 aa18.01■□□□□ 0.47
VCPKMT-201ENST00000395859 SLC9C1Q4G0N8 1177 aa18.01■□□□□ 0.47
VCPKMT-201ENST00000395859 DCAF8Q5TAQ9 597 aa18.01■□□□□ 0.47
VCPKMT-201ENST00000395859 UBE2Q1Q7Z7E8 422 aa18.01■□□□□ 0.47
VCPKMT-201ENST00000395859 APOBEC3FQ8IUX4 373 aaKnown RBP18.01■□□□□ 0.47
VCPKMT-201ENST00000395859 SHISA4Q96DD7 197 aa18.01■□□□□ 0.47
VCPKMT-201ENST00000395859 TSPYL4Q9UJ04 414 aa18.01■□□□□ 0.47
VCPKMT-201ENST00000395859 NBPF11Q86T75 865 aa18■□□□□ 0.47
VCPKMT-201ENST00000395859 PLBD2Q8NHP8 589 aa18■□□□□ 0.47
VCPKMT-201ENST00000395859 BABAM1Q9NWV8 329 aa18■□□□□ 0.47
VCPKMT-201ENST00000395859 XDHP47989 1333 aa17.99■□□□□ 0.47
VCPKMT-201ENST00000395859 MYO3BQ8WXR4 1341 aa17.99■□□□□ 0.47
VCPKMT-201ENST00000395859 ATP5J2-PTCD1G3V325 749 aa17.99■□□□□ 0.47
VCPKMT-201ENST00000395859 STRIP1Q5VSL9 837 aa17.99■□□□□ 0.47
VCPKMT-201ENST00000395859 OGFOD1Q8N543 542 aa17.99■□□□□ 0.47
VCPKMT-201ENST00000395859 MED23Q9ULK4 1368 aa17.99■□□□□ 0.47
VCPKMT-201ENST00000395859 SOX1O00570 391 aaPredicted RBP17.98■□□□□ 0.47
VCPKMT-201ENST00000395859 SLC4A8Q2Y0W8 1093 aa17.98■□□□□ 0.47
VCPKMT-201ENST00000395859 ATP2B4P23634 1241 aa17.97■□□□□ 0.47
VCPKMT-201ENST00000395859 RTL5Q5HYW3 569 aaPredicted RBP17.97■□□□□ 0.47
VCPKMT-201ENST00000395859 OTUD7BQ6GQQ9 843 aa17.97■□□□□ 0.47
VCPKMT-201ENST00000395859 ANKRD13DQ6ZTN6 518 aa17.97■□□□□ 0.47
VCPKMT-201ENST00000395859 MS4A4AQ96JQ5 239 aa17.97■□□□□ 0.47
VCPKMT-201ENST00000395859 DEFB129Q9H1M3 183 aa17.97■□□□□ 0.47
VCPKMT-201ENST00000395859 A0A1W2PPC1 479 aa17.96■□□□□ 0.47
VCPKMT-201ENST00000395859 TRIM26Q12899 539 aaPredicted RBP17.95■□□□□ 0.46
VCPKMT-201ENST00000395859 CHPF2Q9P2E5 772 aa17.95■□□□□ 0.46
VCPKMT-201ENST00000395859 ZSWIM8A7E2V4 1837 aa17.95■□□□□ 0.46
VCPKMT-201ENST00000395859 OTOFQ9HC10 1997 aa17.94■□□□□ 0.46
VCPKMT-201ENST00000395859 ZBTB38Q8NAP3 1195 aaPredicted RBP17.94■□□□□ 0.46
VCPKMT-201ENST00000395859 SH3TC2Q8TF17 1288 aa17.94■□□□□ 0.46
VCPKMT-201ENST00000395859 ECM29Q5VYK3 1845 aa17.93■□□□□ 0.46
VCPKMT-201ENST00000395859 PPP1R12BO60237 982 aaPredicted RBP17.93■□□□□ 0.46
VCPKMT-201ENST00000395859 USP2O75604 605 aaPredicted RBP17.93■□□□□ 0.46
VCPKMT-201ENST00000395859 KRT24Q2M2I5 525 aa17.93■□□□□ 0.46
VCPKMT-201ENST00000395859 MTMR14Q8NCE2 650 aa17.93■□□□□ 0.46
VCPKMT-201ENST00000395859 LRCH3Q96II8 777 aa17.93■□□□□ 0.46
VCPKMT-201ENST00000395859 PPP2R3BQ9Y5P8 575 aa17.93■□□□□ 0.46
VCPKMT-201ENST00000395859 ZBTB7BO15156 539 aaPredicted RBP17.92■□□□□ 0.46
VCPKMT-201ENST00000395859 ARHGEF6Q15052 776 aa17.92■□□□□ 0.46
VCPKMT-201ENST00000395859 CCDC152Q4G0S7 254 aa17.92■□□□□ 0.46
VCPKMT-201ENST00000395859 TXNRD3Q86VQ6 643 aa17.92■□□□□ 0.46
VCPKMT-201ENST00000395859 BRI3BPQ8WY22 251 aa17.92■□□□□ 0.46
VCPKMT-201ENST00000395859 DPF3Q92784 378 aa17.92■□□□□ 0.46
VCPKMT-201ENST00000395859 ZNF804BA4D1E1 1349 aa17.92■□□□□ 0.46
VCPKMT-201ENST00000395859 MYCP01106 439 aaPredicted RBP17.91■□□□□ 0.46
VCPKMT-201ENST00000395859 MTFR1Q15390 333 aa17.91■□□□□ 0.46
VCPKMT-201ENST00000395859 KIAA0825Q8IV33 1275 aa17.91■□□□□ 0.46
VCPKMT-201ENST00000395859 COA1Q9GZY4 146 aa17.91■□□□□ 0.46
VCPKMT-201ENST00000395859 LAMA2P24043 3122 aaKnown RBP17.91■□□□□ 0.46
VCPKMT-201ENST00000395859 NEFMP07197 916 aa17.9■□□□□ 0.46
VCPKMT-201ENST00000395859 ANKRD13AQ8IZ07 590 aa17.9■□□□□ 0.46
VCPKMT-201ENST00000395859 ARHGAP39Q9C0H5 1083 aa17.9■□□□□ 0.46
VCPKMT-201ENST00000395859 MINPP1Q9UNW1 487 aa17.9■□□□□ 0.46
VCPKMT-201ENST00000395859 EYSQ5T1H1 3165 aa17.9■□□□□ 0.46
VCPKMT-201ENST00000395859 PDE8AO60658 829 aa17.89■□□□□ 0.45
VCPKMT-201ENST00000395859 NBPF12Q5TAG4 269 aaPredicted RBP17.89■□□□□ 0.45
VCPKMT-201ENST00000395859 TTLL5Q6EMB2 1281 aa17.89■□□□□ 0.45
VCPKMT-201ENST00000395859 GPR153Q6NV75 609 aa17.89■□□□□ 0.45
VCPKMT-201ENST00000395859 ANKRD18AQ8IVF6 992 aa17.89■□□□□ 0.45
VCPKMT-201ENST00000395859 PCDHAC2Q9Y5I4 1007 aa17.89■□□□□ 0.45
VCPKMT-201ENST00000395859 AOX1Q06278 1338 aa17.89■□□□□ 0.45
VCPKMT-201ENST00000395859 PCCAP05165 728 aaPredicted RBP17.88■□□□□ 0.45
VCPKMT-201ENST00000395859 HSP90B1P14625 803 aaKnown RBP17.88■□□□□ 0.45
VCPKMT-201ENST00000395859 GJA8P48165 433 aa17.88■□□□□ 0.45
VCPKMT-201ENST00000395859 IREB2P48200 963 aaKnown RBP17.88■□□□□ 0.45
VCPKMT-201ENST00000395859 CCT4P50991 539 aaKnown RBP17.88■□□□□ 0.45
VCPKMT-201ENST00000395859 SUPT20HL1Q3ZLR7 823 aa17.88■□□□□ 0.45
VCPKMT-201ENST00000395859 FAM43AQ8N2R8 423 aa17.88■□□□□ 0.45
VCPKMT-201ENST00000395859 OPTNQ96CV9 577 aa17.88■□□□□ 0.45
VCPKMT-201ENST00000395859 COL25A1Q9BXS0 654 aaPredicted RBP17.88■□□□□ 0.45
VCPKMT-201ENST00000395859 ZFYVE28Q9HCC9 887 aa17.88■□□□□ 0.45
VCPKMT-201ENST00000395859 BSDC1Q9NW68 430 aaPredicted RBP17.88■□□□□ 0.45
VCPKMT-201ENST00000395859 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms