RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 CNTNAP5Q8WYK1 1306 aa8.68□□□□□ -1.02
AP3S1-202ENST00000395548 CHD2O14647 1828 aaKnown RBP8.68□□□□□ -1.02
AP3S1-202ENST00000395548 FAM196BA6NMK8 535 aa8.67□□□□□ -1.02
AP3S1-202ENST00000395548 GLI3P10071 1580 aa8.67□□□□□ -1.02
AP3S1-202ENST00000395548 MST1RQ04912 1400 aa8.67□□□□□ -1.02
AP3S1-202ENST00000395548 PTK7Q13308 1070 aa8.67□□□□□ -1.02
AP3S1-202ENST00000395548 RPRD2Q5VT52 1461 aaKnown RBP8.67□□□□□ -1.02
AP3S1-202ENST00000395548 BRWD3Q6RI45 1802 aa8.67□□□□□ -1.02
AP3S1-202ENST00000395548 STAG2Q8N3U4 1231 aa8.67□□□□□ -1.02
AP3S1-202ENST00000395548 C7orf43Q8WVR3 580 aa8.67□□□□□ -1.02
AP3S1-202ENST00000395548 CAMKK2Q96RR4 588 aa8.67□□□□□ -1.02
AP3S1-202ENST00000395548 PRR12Q9ULL5 1215 aa8.67□□□□□ -1.02
AP3S1-202ENST00000395548 HCN4Q9Y3Q4 1203 aa8.67□□□□□ -1.02
AP3S1-202ENST00000395548 PIK3R4Q99570 1358 aa8.66□□□□□ -1.02
AP3S1-202ENST00000395548 PLEKHG1Q9ULL1 1385 aa8.66□□□□□ -1.02
AP3S1-202ENST00000395548 SHISA8B8ZZ34 492 aa8.66□□□□□ -1.02
AP3S1-202ENST00000395548 AMPD1P23109 780 aa8.66□□□□□ -1.02
AP3S1-202ENST00000395548 ADH6P28332 368 aa8.66□□□□□ -1.02
AP3S1-202ENST00000395548 CRTC2Q53ET0 693 aaPredicted RBP8.66□□□□□ -1.02
AP3S1-202ENST00000395548 SH3PXD2AQ5TCZ1 1133 aa8.66□□□□□ -1.02
AP3S1-202ENST00000395548 C1orf229Q6ZS94 237 aaPredicted RBP8.66□□□□□ -1.02
AP3S1-202ENST00000395548 KCTD17Q8N5Z5 321 aa8.66□□□□□ -1.02
AP3S1-202ENST00000395548 SCG3Q8WXD2 468 aaKnown RBP8.66□□□□□ -1.02
AP3S1-202ENST00000395548 HINFPQ9BQA5 517 aa8.66□□□□□ -1.02
AP3S1-202ENST00000395548 PHACTR1Q9C0D0 580 aa8.66□□□□□ -1.02
AP3S1-202ENST00000395548 RGPD1P0DJD0 1748 aa8.66□□□□□ -1.02
AP3S1-202ENST00000395548 NEURL1BA8MQ27 555 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 USP17L15C9J2P7 530 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 USP17L10C9JJH3 530 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 USP17L13C9JLJ4 530 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 USP17L12C9JPN9 530 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 USP17L11C9JVI0 530 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 USP17L21D6R901 530 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 USP17L18D6R9N7 530 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 USP17L22D6RA61 530 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 USP17L17D6RBQ6 530 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 USP17L19D6RCP7 530 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 USP17L20D6RJB6 530 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 EFSO43281 561 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 USP17L24Q0WX57 530 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 DPYDQ12882 1025 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 VPS72Q15906 364 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 ANKMY2Q8IV38 441 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 RRAGCQ9HB90 399 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 MKL2Q9ULH7 1088 aa8.65□□□□□ -1.02
AP3S1-202ENST00000395548 CCDC9Q9Y3X0 531 aaKnown RBP8.65□□□□□ -1.02
AP3S1-202ENST00000395548 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.65□□□□□ -1.03
AP3S1-202ENST00000395548 CCDC18Q5T9S5 1454 aa8.64□□□□□ -1.03
AP3S1-202ENST00000395548 ARHGAP31Q2M1Z3 1444 aa8.64□□□□□ -1.03
AP3S1-202ENST00000395548 C21orf2O43822 256 aa8.64□□□□□ -1.03
AP3S1-202ENST00000395548 EPXP11678 715 aa8.64□□□□□ -1.03
AP3S1-202ENST00000395548 HIF1AQ16665 826 aa8.64□□□□□ -1.03
AP3S1-202ENST00000395548 C2orf49Q9BVC5 232 aaPredicted RBP8.64□□□□□ -1.03
AP3S1-202ENST00000395548 PIK3C2BO00750 1634 aa8.64□□□□□ -1.03
AP3S1-202ENST00000395548 MYOM2P54296 1465 aa8.64□□□□□ -1.03
AP3S1-202ENST00000395548 AATKQ6ZMQ8 1374 aa8.63□□□□□ -1.03
AP3S1-202ENST00000395548 CCNB3Q8WWL7 1395 aa8.63□□□□□ -1.03
AP3S1-202ENST00000395548 PIK3R2O00459 728 aa8.63□□□□□ -1.03
AP3S1-202ENST00000395548 IDI1Q13907 227 aa8.63□□□□□ -1.03
AP3S1-202ENST00000395548 ZNF468Q5VIY5 522 aaPredicted RBP8.63□□□□□ -1.03
AP3S1-202ENST00000395548 BTBD6Q96KE9 485 aa8.63□□□□□ -1.03
AP3S1-202ENST00000395548 SYT17Q9BSW7 474 aa8.63□□□□□ -1.03
AP3S1-202ENST00000395548 HCN2Q9UL51 889 aa8.63□□□□□ -1.03
AP3S1-202ENST00000395548 ADGRB2O60241 1585 aa8.63□□□□□ -1.03
AP3S1-202ENST00000395548 CFAP70Q5T0N1 1121 aa8.62□□□□□ -1.03
AP3S1-202ENST00000395548 ALDH16A1Q8IZ83 802 aa8.62□□□□□ -1.03
AP3S1-202ENST00000395548 STRN4Q9NRL3 753 aa8.62□□□□□ -1.03
AP3S1-202ENST00000395548 SLIT2O94813 1529 aa8.62□□□□□ -1.03
AP3S1-202ENST00000395548 MBD5Q9P267 1494 aa8.62□□□□□ -1.03
AP3S1-202ENST00000395548 MTUS2Q5JR59 1369 aa8.61□□□□□ -1.03
AP3S1-202ENST00000395548 APBA3O96018 575 aa8.61□□□□□ -1.03
AP3S1-202ENST00000395548 IGFBP4P22692 258 aa8.61□□□□□ -1.03
AP3S1-202ENST00000395548 SNRPNP63162 240 aaKnown RBP8.61□□□□□ -1.03
AP3S1-202ENST00000395548 GPR162Q16538 588 aa8.61□□□□□ -1.03
AP3S1-202ENST00000395548 SUSD3Q96L08 255 aa8.61□□□□□ -1.03
AP3S1-202ENST00000395548 CEP63Q96MT8 703 aa8.61□□□□□ -1.03
AP3S1-202ENST00000395548 AMOTL2Q9Y2J4 779 aa8.61□□□□□ -1.03
AP3S1-202ENST00000395548 COL22A1Q8NFW1 1626 aaPredicted RBP8.61□□□□□ -1.03
AP3S1-202ENST00000395548 CFAP65Q6ZU64 1925 aaKnown RBP8.6□□□□□ -1.03
AP3S1-202ENST00000395548 IGHA1P01876 353 aa8.6□□□□□ -1.03
AP3S1-202ENST00000395548 RFX1P22670 979 aa8.6□□□□□ -1.03
AP3S1-202ENST00000395548 PCBP4P57723 403 aaKnown RBP8.6□□□□□ -1.03
AP3S1-202ENST00000395548 NEUROD1Q13562 356 aa8.6□□□□□ -1.03
AP3S1-202ENST00000395548 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.6□□□□□ -1.03
AP3S1-202ENST00000395548 KLF15Q9UIH9 416 aa8.6□□□□□ -1.03
AP3S1-202ENST00000395548 WWC3Q9ULE0 1092 aa8.6□□□□□ -1.03
AP3S1-202ENST00000395548 TSPY4P0CV99 314 aa8.59□□□□□ -1.03
AP3S1-202ENST00000395548 TSPY10P0CW01 314 aa8.59□□□□□ -1.03
AP3S1-202ENST00000395548 SFSWAPQ12872 951 aaKnown RBP8.59□□□□□ -1.03
AP3S1-202ENST00000395548 ALYREFQ86V81 257 aaKnown RBP8.59□□□□□ -1.03
AP3S1-202ENST00000395548 FAM200AQ8TCP9 573 aa8.59□□□□□ -1.03
AP3S1-202ENST00000395548 DCAF5Q96JK2 942 aa8.59□□□□□ -1.03
AP3S1-202ENST00000395548 HSH2DQ96JZ2 352 aa8.59□□□□□ -1.03
AP3S1-202ENST00000395548 ZMYND15Q9H091 742 aa8.59□□□□□ -1.03
AP3S1-202ENST00000395548 BRD7Q9NPI1 651 aa8.59□□□□□ -1.03
AP3S1-202ENST00000395548 ADGRB3O60242 1522 aa8.59□□□□□ -1.03
AP3S1-202ENST00000395548 ALAS2P22557 587 aa8.58□□□□□ -1.04
AP3S1-202ENST00000395548 FAM196AQ6ZSG2 479 aa8.58□□□□□ -1.04
AP3S1-202ENST00000395548 CHSY3Q70JA7 882 aa8.58□□□□□ -1.04
AP3S1-202ENST00000395548 SYT9Q86SS6 491 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms