RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 MARCKSP29966 332 aaPredicted RBP16.69■□□□□ 0.26
CLIP2-203ENST00000395060 STK38Q15208 465 aa16.69■□□□□ 0.26
CLIP2-203ENST00000395060 UBE3BQ7Z3V4 1068 aa16.69■□□□□ 0.26
CLIP2-203ENST00000395060 NOL10Q9BSC4 688 aaKnown RBP16.69■□□□□ 0.26
CLIP2-203ENST00000395060 TMEM51Q9NW97 253 aa16.69■□□□□ 0.26
CLIP2-203ENST00000395060 AXIN2Q9Y2T1 843 aa16.69■□□□□ 0.26
CLIP2-203ENST00000395060 CLCN6P51797 869 aa16.68■□□□□ 0.26
CLIP2-203ENST00000395060 FAM160A1Q05DH4 1040 aa16.68■□□□□ 0.26
CLIP2-203ENST00000395060 GNL2Q13823 731 aaKnown RBP16.68■□□□□ 0.26
CLIP2-203ENST00000395060 ZSCAN16Q9H4T2 348 aaPredicted RBP16.68■□□□□ 0.26
CLIP2-203ENST00000395060 MTX1Q13505 466 aa16.68■□□□□ 0.26
CLIP2-203ENST00000395060 NEK11Q8NG66 645 aa16.68■□□□□ 0.26
CLIP2-203ENST00000395060 PLCD3Q8N3E9 789 aa16.68■□□□□ 0.26
CLIP2-203ENST00000395060 CCDC34Q96HJ3 373 aa16.68■□□□□ 0.26
CLIP2-203ENST00000395060 ZSWIM4Q9H7M6 989 aa16.68■□□□□ 0.26
CLIP2-203ENST00000395060 ANKARQ7Z5J8 1434 aa16.67■□□□□ 0.26
CLIP2-203ENST00000395060 GYS2P54840 703 aa16.67■□□□□ 0.26
CLIP2-203ENST00000395060 SYCP1Q15431 976 aa16.67■□□□□ 0.26
CLIP2-203ENST00000395060 LINS1Q8NG48 757 aa16.67■□□□□ 0.26
CLIP2-203ENST00000395060 MED23Q9ULK4 1368 aa16.67■□□□□ 0.26
CLIP2-203ENST00000395060 RGPD1P0DJD0 1748 aa16.67■□□□□ 0.26
CLIP2-203ENST00000395060 NALCNQ8IZF0 1738 aa16.67■□□□□ 0.26
CLIP2-203ENST00000395060 TIMM10P62072 90 aa16.67■□□□□ 0.26
CLIP2-203ENST00000395060 IRX5P78411 483 aaPredicted RBP16.67■□□□□ 0.26
CLIP2-203ENST00000395060 COPS6Q7L5N1 327 aa16.67■□□□□ 0.26
CLIP2-203ENST00000395060 ANKRD24Q8TF21 1146 aa16.67■□□□□ 0.26
CLIP2-203ENST00000395060 XAGE3Q8WTP9 111 aa16.67■□□□□ 0.26
CLIP2-203ENST00000395060 HMG20BQ9P0W2 317 aa16.67■□□□□ 0.26
CLIP2-203ENST00000395060 CDC25BP30305 580 aa16.66■□□□□ 0.26
CLIP2-203ENST00000395060 SARM1Q6SZW1 724 aa16.66■□□□□ 0.26
CLIP2-203ENST00000395060 ILDR1Q86SU0 546 aaPredicted RBP16.66■□□□□ 0.26
CLIP2-203ENST00000395060 CABLES1Q8TDN4 633 aa16.66■□□□□ 0.26
CLIP2-203ENST00000395060 SNRKQ9NRH2 765 aa16.66■□□□□ 0.26
CLIP2-203ENST00000395060 RCOR1Q9UKL0 485 aa16.66■□□□□ 0.26
CLIP2-203ENST00000395060 KRT28Q7Z3Y7 464 aa16.66■□□□□ 0.26
CLIP2-203ENST00000395060 ALDH1L1O75891 902 aa16.65■□□□□ 0.26
CLIP2-203ENST00000395060 KRT32Q14532 448 aa16.65■□□□□ 0.26
CLIP2-203ENST00000395060 KCNH5Q8NCM2 988 aa16.65■□□□□ 0.26
CLIP2-203ENST00000395060 MRPS27Q92552 414 aaKnown RBP16.65■□□□□ 0.26
CLIP2-203ENST00000395060 UTP14AQ9BVJ6 771 aaKnown RBP16.65■□□□□ 0.26
CLIP2-203ENST00000395060 ZNF609O15014 1411 aa16.65■□□□□ 0.26
CLIP2-203ENST00000395060 RXRAP19793 462 aa16.65■□□□□ 0.26
CLIP2-203ENST00000395060 TNNI3KQ59H18 835 aa16.65■□□□□ 0.26
CLIP2-203ENST00000395060 MNS1Q8NEH6 495 aa16.65■□□□□ 0.26
CLIP2-203ENST00000395060 NAT10Q9H0A0 1025 aaKnown RBP16.65■□□□□ 0.26
CLIP2-203ENST00000395060 FPGT-TNNI3KV9GXZ4 949 aa16.65■□□□□ 0.26
CLIP2-203ENST00000395060 PXDNLA1KZ92 1463 aa16.65■□□□□ 0.26
CLIP2-203ENST00000395060 NEMFO60524 1076 aa16.65■□□□□ 0.26
CLIP2-203ENST00000395060 NEXNQ0ZGT2 675 aa16.65■□□□□ 0.26
CLIP2-203ENST00000395060 MCMDC2Q4G0Z9 681 aa16.65■□□□□ 0.26
CLIP2-203ENST00000395060 PDILTQ8N807 584 aa16.65■□□□□ 0.26
CLIP2-203ENST00000395060 UBXN4Q92575 508 aa16.65■□□□□ 0.26
CLIP2-203ENST00000395060 ZNF396Q96N95 335 aaPredicted RBP16.65■□□□□ 0.26
CLIP2-203ENST00000395060 CCDC85AQ96PX6 553 aaPredicted RBP16.65■□□□□ 0.26
CLIP2-203ENST00000395060 CARD6Q9BX69 1037 aa16.65■□□□□ 0.26
CLIP2-203ENST00000395060 RNMTO43148 476 aaKnown RBP16.64■□□□□ 0.25
CLIP2-203ENST00000395060 PLEKHO1Q53GL0 409 aaPredicted RBP16.64■□□□□ 0.25
CLIP2-203ENST00000395060 ENGASEQ8NFI3 743 aa16.64■□□□□ 0.25
CLIP2-203ENST00000395060 DPF2Q92785 391 aa16.64■□□□□ 0.25
CLIP2-203ENST00000395060 CCDC66A2RUB6 948 aa16.64■□□□□ 0.25
CLIP2-203ENST00000395060 DDX58O95786 925 aaKnown RBP16.64■□□□□ 0.25
CLIP2-203ENST00000395060 SERPINC1P01008 464 aa16.64■□□□□ 0.25
CLIP2-203ENST00000395060 CTAGE5O15320 804 aa16.63■□□□□ 0.25
CLIP2-203ENST00000395060 SLC3A2P08195 630 aaKnown RBP16.63■□□□□ 0.25
CLIP2-203ENST00000395060 CFAP100Q494V2 611 aa16.63■□□□□ 0.25
CLIP2-203ENST00000395060 TIGD1Q96MW7 591 aa16.63■□□□□ 0.25
CLIP2-203ENST00000395060 NLRP2Q9NX02 1062 aa16.63■□□□□ 0.25
CLIP2-203ENST00000395060 U3KPZ7 1027 aaPredicted RBP16.63■□□□□ 0.25
CLIP2-203ENST00000395060 DHX32Q7L7V1 743 aaKnown RBP16.63■□□□□ 0.25
CLIP2-203ENST00000395060 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.63■□□□□ 0.25
CLIP2-203ENST00000395060 PNMA6AP0CW24 399 aaPredicted RBP16.63■□□□□ 0.25
CLIP2-203ENST00000395060 AIFM3Q96NN9 605 aa16.63■□□□□ 0.25
CLIP2-203ENST00000395060 KIAA1468Q9P260 1216 aa16.63■□□□□ 0.25
CLIP2-203ENST00000395060 FHOD1Q9Y613 1164 aa16.63■□□□□ 0.25
CLIP2-203ENST00000395060 TMEM232C9JQI7 657 aa16.62■□□□□ 0.25
CLIP2-203ENST00000395060 PFKFB2O60825 505 aa16.62■□□□□ 0.25
CLIP2-203ENST00000395060 HNRNPH2P55795 449 aaKnown RBP16.62■□□□□ 0.25
CLIP2-203ENST00000395060 BMS1Q14692 1282 aaKnown RBP16.62■□□□□ 0.25
CLIP2-203ENST00000395060 ARHGEF25Q86VW2 580 aa16.62■□□□□ 0.25
CLIP2-203ENST00000395060 FMR1NBQ8N0W7 255 aaPredicted RBP16.62■□□□□ 0.25
CLIP2-203ENST00000395060 FMN2Q9NZ56 1722 aa16.62■□□□□ 0.25
CLIP2-203ENST00000395060 FKBP4Q02790 459 aaKnown RBP eCLIP16.62■□□□□ 0.25
CLIP2-203ENST00000395060 SPECC1Q5M775 1068 aa16.62■□□□□ 0.25
CLIP2-203ENST00000395060 TEX35Q5T0J7 233 aa16.62■□□□□ 0.25
CLIP2-203ENST00000395060 NEURL1BA8MQ27 555 aa16.61■□□□□ 0.25
CLIP2-203ENST00000395060 E7EWF7 191 aa16.61■□□□□ 0.25
CLIP2-203ENST00000395060 PDIA3P30101 505 aaKnown RBP16.61■□□□□ 0.25
CLIP2-203ENST00000395060 AKAP4Q5JQC9 854 aa16.61■□□□□ 0.25
CLIP2-203ENST00000395060 NWD1Q149M9 1564 aa16.61■□□□□ 0.25
CLIP2-203ENST00000395060 CAVIN2O95810 425 aa16.61■□□□□ 0.25
CLIP2-203ENST00000395060 GSDMDP57764 484 aa16.61■□□□□ 0.25
CLIP2-203ENST00000395060 ST5P78524 1137 aa16.61■□□□□ 0.25
CLIP2-203ENST00000395060 GCKRQ14397 625 aa16.61■□□□□ 0.25
CLIP2-203ENST00000395060 CHRNA2Q15822 529 aa16.61■□□□□ 0.25
CLIP2-203ENST00000395060 TMCO3Q6UWJ1 677 aa16.61■□□□□ 0.25
CLIP2-203ENST00000395060 SMARCC2Q8TAQ2 1214 aa16.61■□□□□ 0.25
CLIP2-203ENST00000395060 CEMIPQ8WUJ3 1361 aa16.61■□□□□ 0.25
CLIP2-203ENST00000395060 PLA2G4AP47712 749 aa16.61■□□□□ 0.25
CLIP2-203ENST00000395060 FANCCQ00597 558 aa16.61■□□□□ 0.25
CLIP2-203ENST00000395060 ZNF594Q96JF6 807 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms