RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 PUS7LQ9H0K6 701 aaKnown RBP18.74■□□□□ 0.59
SMARCD1-202ENST00000394963 LMBRD1Q9NUN5 540 aa18.74■□□□□ 0.59
SMARCD1-202ENST00000394963 SALL3Q9BXA9 1300 aa18.74■□□□□ 0.59
SMARCD1-202ENST00000394963 HSPD1P10809 573 aaKnown RBP18.73■□□□□ 0.59
SMARCD1-202ENST00000394963 RPS6KB1P23443 525 aa18.73■□□□□ 0.59
SMARCD1-202ENST00000394963 ERICH2A1L162 156 aa18.73■□□□□ 0.59
SMARCD1-202ENST00000394963 B4E1Z4 1266 aa18.73■□□□□ 0.59
SMARCD1-202ENST00000394963 MBD4O95243 580 aa18.73■□□□□ 0.59
SMARCD1-202ENST00000394963 CYP7A1P22680 504 aa18.73■□□□□ 0.59
SMARCD1-202ENST00000394963 CCDC102BQ68D86 513 aa18.73■□□□□ 0.59
SMARCD1-202ENST00000394963 SH2B1Q9NRF2 756 aaPredicted RBP18.73■□□□□ 0.59
SMARCD1-202ENST00000394963 ZDHHC9Q9Y397 364 aa18.73■□□□□ 0.59
SMARCD1-202ENST00000394963 KIF3AQ9Y496 699 aa18.73■□□□□ 0.59
SMARCD1-202ENST00000394963 RGPD2P0DJD1 1756 aa18.73■□□□□ 0.59
SMARCD1-202ENST00000394963 MBD3O95983 291 aa18.73■□□□□ 0.59
SMARCD1-202ENST00000394963 CAMTA1Q9Y6Y1 1673 aa18.73■□□□□ 0.59
SMARCD1-202ENST00000394963 M0R2C6 588 aa18.72■□□□□ 0.59
SMARCD1-202ENST00000394963 F13A1P00488 732 aa18.72■□□□□ 0.59
SMARCD1-202ENST00000394963 CAVIN4Q5BKX8 364 aa18.72■□□□□ 0.59
SMARCD1-202ENST00000394963 CTNNA3Q9UI47 895 aa18.72■□□□□ 0.59
SMARCD1-202ENST00000394963 RFX5P48382 616 aaPredicted RBP18.72■□□□□ 0.59
SMARCD1-202ENST00000394963 CPLX2Q6PUV4 134 aaKnown RBP18.72■□□□□ 0.59
SMARCD1-202ENST00000394963 CMTR1Q8N1G2 835 aaKnown RBP18.72■□□□□ 0.59
SMARCD1-202ENST00000394963 TMEM63CQ9P1W3 806 aa18.72■□□□□ 0.59
SMARCD1-202ENST00000394963 RTCBQ9Y3I0 505 aaKnown RBP18.72■□□□□ 0.59
SMARCD1-202ENST00000394963 ZNF532Q9HCE3 1301 aa18.72■□□□□ 0.59
SMARCD1-202ENST00000394963 F8W031 263 aaPredicted RBP18.72■□□□□ 0.59
SMARCD1-202ENST00000394963 CTDSPL2Q05D32 466 aa18.72■□□□□ 0.59
SMARCD1-202ENST00000394963 CSPP1Q1MSJ5 1256 aa18.72■□□□□ 0.59
SMARCD1-202ENST00000394963 WTIPA6NIX2 430 aaPredicted RBP18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 IFIT3O14879 490 aaKnown RBP18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 PRC1O43663 620 aa18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 ITPK1Q13572 414 aa18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 ISM2Q6H9L7 571 aa18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 NLRP3Q96P20 1036 aa18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 PPP1R1BQ9UD71 204 aaPredicted RBP18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 SLC4A4Q9Y6R1 1079 aa18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 NECTIN1Q15223 517 aa18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 SDF4Q9BRK5 362 aa18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 CHD2O14647 1828 aaKnown RBP18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 AKAP17AQ02040 695 aaKnown RBP18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 ERFEQ4G0M1 354 aa18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 GPT2Q8TD30 523 aa18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 ERCC4Q92889 916 aaPredicted RBP18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 GPR101Q96P66 508 aaPredicted RBP18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 CDC5LQ99459 802 aaKnown RBP18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 TSPY26PQ9H489 355 aa18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 GNL3LQ9NVN8 582 aaKnown RBP18.71■□□□□ 0.59
SMARCD1-202ENST00000394963 FGAP02671 866 aa18.7■□□□□ 0.58
SMARCD1-202ENST00000394963 TRIM29Q14134 588 aa18.7■□□□□ 0.58
SMARCD1-202ENST00000394963 GJB4Q9NTQ9 266 aa18.7■□□□□ 0.58
SMARCD1-202ENST00000394963 SRCAPQ6ZRS2 3230 aa18.7■□□□□ 0.58
SMARCD1-202ENST00000394963 ADAMTSL3P82987 1691 aa18.7■□□□□ 0.58
SMARCD1-202ENST00000394963 hCG_1642624A0A1W2PR95 340 aa18.7■□□□□ 0.58
SMARCD1-202ENST00000394963 DHX16O60231 1041 aaKnown RBP18.7■□□□□ 0.58
SMARCD1-202ENST00000394963 NWD1Q149M9 1564 aa18.7■□□□□ 0.58
SMARCD1-202ENST00000394963 SDR42E1Q8WUS8 393 aa18.7■□□□□ 0.58
SMARCD1-202ENST00000394963 MAST3O60307 1309 aa18.7■□□□□ 0.58
SMARCD1-202ENST00000394963 C6orf229H3BNL8 230 aa18.69■□□□□ 0.58
SMARCD1-202ENST00000394963 ZSCAN25Q6NSZ9 544 aa18.69■□□□□ 0.58
SMARCD1-202ENST00000394963 E7EWF7 191 aa18.69■□□□□ 0.58
SMARCD1-202ENST00000394963 PDE8BO95263 885 aa18.69■□□□□ 0.58
SMARCD1-202ENST00000394963 MCAMP43121 646 aa18.69■□□□□ 0.58
SMARCD1-202ENST00000394963 DHX32Q7L7V1 743 aaKnown RBP18.69■□□□□ 0.58
SMARCD1-202ENST00000394963 ZSWIM6Q9HCJ5 1215 aa18.69■□□□□ 0.58
SMARCD1-202ENST00000394963 ORC3Q9UBD5 711 aaPredicted RBP18.69■□□□□ 0.58
SMARCD1-202ENST00000394963 CCDC69A6NI79 296 aa18.69■□□□□ 0.58
SMARCD1-202ENST00000394963 STK38Q15208 465 aa18.69■□□□□ 0.58
SMARCD1-202ENST00000394963 NACAP1Q9BZK3 213 aa18.69■□□□□ 0.58
SMARCD1-202ENST00000394963 HMG20BQ9P0W2 317 aa18.69■□□□□ 0.58
SMARCD1-202ENST00000394963 BRD1O95696 1058 aa18.68■□□□□ 0.58
SMARCD1-202ENST00000394963 ISCA1Q9BUE6 129 aa18.68■□□□□ 0.58
SMARCD1-202ENST00000394963 USP25Q9UHP3 1055 aa18.68■□□□□ 0.58
SMARCD1-202ENST00000394963 PALLDQ8WX93 1383 aa18.68■□□□□ 0.58
SMARCD1-202ENST00000394963 PRKAB2O43741 272 aa18.68■□□□□ 0.58
SMARCD1-202ENST00000394963 IL6STP40189 918 aaPredicted RBP18.68■□□□□ 0.58
SMARCD1-202ENST00000394963 TMEM67Q5HYA8 995 aa18.68■□□□□ 0.58
SMARCD1-202ENST00000394963 FTOQ9C0B1 505 aaKnown RBP eCLIP18.68■□□□□ 0.58
SMARCD1-202ENST00000394963 PTPDC1A2A3K4 754 aa18.68■□□□□ 0.58
SMARCD1-202ENST00000394963 SMARCC1Q92922 1105 aaPredicted RBP18.68■□□□□ 0.58
SMARCD1-202ENST00000394963 COL5A2P05997 1499 aaPredicted RBP18.67■□□□□ 0.58
SMARCD1-202ENST00000394963 PUM3Q15397 648 aaKnown RBP18.67■□□□□ 0.58
SMARCD1-202ENST00000394963 UBAC1Q9BSL1 405 aa18.67■□□□□ 0.58
SMARCD1-202ENST00000394963 TNMDQ9H2S6 317 aa18.67■□□□□ 0.58
SMARCD1-202ENST00000394963 OVOS2A0A0G2JMS6 1433 aa18.67■□□□□ 0.58
SMARCD1-202ENST00000394963 ATP2B2Q01814 1243 aa18.67■□□□□ 0.58
SMARCD1-202ENST00000394963 NCOA7Q8NI08 942 aa18.67■□□□□ 0.58
SMARCD1-202ENST00000394963 PHKBQ93100 1093 aa18.67■□□□□ 0.58
SMARCD1-202ENST00000394963 RBSNQ9H1K0 784 aa18.67■□□□□ 0.58
SMARCD1-202ENST00000394963 ERBB4Q15303 1308 aa18.67■□□□□ 0.58
SMARCD1-202ENST00000394963 RABL6Q3YEC7 729 aaPredicted RBP18.67■□□□□ 0.58
SMARCD1-202ENST00000394963 INTS4Q96HW7 963 aaKnown RBP18.67■□□□□ 0.58
SMARCD1-202ENST00000394963 C8orf76Q96K31 380 aa18.67■□□□□ 0.58
SMARCD1-202ENST00000394963 CHRNDQ07001 517 aa18.66■□□□□ 0.58
SMARCD1-202ENST00000394963 ZNF830Q96NB3 372 aaPredicted RBP18.66■□□□□ 0.58
SMARCD1-202ENST00000394963 CPDO75976 1380 aa18.66■□□□□ 0.58
SMARCD1-202ENST00000394963 RIMBP2O15034 1052 aa18.66■□□□□ 0.58
SMARCD1-202ENST00000394963 TRIM37O94972 964 aa18.66■□□□□ 0.58
SMARCD1-202ENST00000394963 CCDC73Q6ZRK6 1079 aa18.66■□□□□ 0.58
SMARCD1-202ENST00000394963 SPATA5Q8NB90 893 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms