RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 FGD1P98174 961 aa24.34■■□□□ 1.49
PRKCD-202ENST00000394729 APPP05067 770 aa24.33■■□□□ 1.49
PRKCD-202ENST00000394729 BLOC1S2Q6QNY1 142 aa24.33■■□□□ 1.48
PRKCD-202ENST00000394729 CNTNAP4Q9C0A0 1308 aa24.32■■□□□ 1.48
PRKCD-202ENST00000394729 ANKRD18AQ8IVF6 992 aa24.32■■□□□ 1.48
PRKCD-202ENST00000394729 ABCF2Q9UG63 623 aa24.32■■□□□ 1.48
PRKCD-202ENST00000394729 WWC3Q9ULE0 1092 aa24.32■■□□□ 1.48
PRKCD-202ENST00000394729 HSPD1P10809 573 aaKnown RBP24.32■■□□□ 1.48
PRKCD-202ENST00000394729 KLRK1P26718 216 aa24.32■■□□□ 1.48
PRKCD-202ENST00000394729 RASGRF1Q13972 1273 aa24.32■■□□□ 1.48
PRKCD-202ENST00000394729 RNF20Q5VTR2 975 aa24.32■■□□□ 1.48
PRKCD-202ENST00000394729 TTC14Q96N46 770 aa24.32■■□□□ 1.48
PRKCD-202ENST00000394729 CLEC4GQ6UXB4 293 aa24.31■■□□□ 1.48
PRKCD-202ENST00000394729 LPIN2Q92539 896 aa24.31■■□□□ 1.48
PRKCD-202ENST00000394729 NCLP19338 710 aaKnown RBP24.3■■□□□ 1.48
PRKCD-202ENST00000394729 HMG20BQ9P0W2 317 aa24.3■■□□□ 1.48
PRKCD-202ENST00000394729 ZDHHC9Q9Y397 364 aa24.3■■□□□ 1.48
PRKCD-202ENST00000394729 SLC5A1P13866 664 aa24.3■■□□□ 1.48
PRKCD-202ENST00000394729 ZMYM1Q5SVZ6 1142 aa24.3■■□□□ 1.48
PRKCD-202ENST00000394729 TFCP2L1Q9NZI6 479 aa24.3■■□□□ 1.48
PRKCD-202ENST00000394729 TPCN1Q9ULQ1 816 aa24.3■■□□□ 1.48
PRKCD-202ENST00000394729 ANKRD36CQ5JPF3 1778 aa24.3■■□□□ 1.48
PRKCD-202ENST00000394729 GSE1Q14687 1217 aa24.3■■□□□ 1.48
PRKCD-202ENST00000394729 LIMCH1Q9UPQ0 1083 aa24.3■■□□□ 1.48
PRKCD-202ENST00000394729 MYH3P11055 1940 aa24.29■■□□□ 1.48
PRKCD-202ENST00000394729 FOSBP53539 338 aa24.29■■□□□ 1.48
PRKCD-202ENST00000394729 ME3Q16798 604 aa24.29■■□□□ 1.48
PRKCD-202ENST00000394729 STOX1Q6ZVD7 989 aa24.29■■□□□ 1.48
PRKCD-202ENST00000394729 RAB11FIP4Q86YS3 637 aa24.29■■□□□ 1.48
PRKCD-202ENST00000394729 NLRP3Q96P20 1036 aa24.29■■□□□ 1.48
PRKCD-202ENST00000394729 GPR101Q96P66 508 aaPredicted RBP24.29■■□□□ 1.48
PRKCD-202ENST00000394729 BCL11BQ9C0K0 894 aaPredicted RBP24.29■■□□□ 1.48
PRKCD-202ENST00000394729 GDPD2Q9HCC8 539 aa24.29■■□□□ 1.48
PRKCD-202ENST00000394729 HSP90B1P14625 803 aaKnown RBP24.29■■□□□ 1.48
PRKCD-202ENST00000394729 NFIXQ14938 502 aa24.29■■□□□ 1.48
PRKCD-202ENST00000394729 VPS37DQ86XT2 251 aa24.29■■□□□ 1.48
PRKCD-202ENST00000394729 ZSWIM6Q9HCJ5 1215 aa24.29■■□□□ 1.48
PRKCD-202ENST00000394729 MROH5Q6ZUA9 1318 aa24.29■■□□□ 1.48
PRKCD-202ENST00000394729 TRAK2O60296 914 aa24.28■■□□□ 1.48
PRKCD-202ENST00000394729 TPTE2Q6XPS3 522 aa24.28■■□□□ 1.48
PRKCD-202ENST00000394729 MIGA1Q8NAN2 632 aa24.28■■□□□ 1.48
PRKCD-202ENST00000394729 CDC5LQ99459 802 aaKnown RBP24.28■■□□□ 1.48
PRKCD-202ENST00000394729 GBP4Q96PP9 640 aa24.27■■□□□ 1.48
PRKCD-202ENST00000394729 FBXO3Q9UK99 471 aa24.27■■□□□ 1.48
PRKCD-202ENST00000394729 SPATA5Q8NB90 893 aa24.27■■□□□ 1.48
PRKCD-202ENST00000394729 DENND2AQ9ULE3 1009 aa24.27■■□□□ 1.48
PRKCD-202ENST00000394729 ATRNO75882 1429 aa24.27■■□□□ 1.48
PRKCD-202ENST00000394729 ZNF532Q9HCE3 1301 aa24.26■■□□□ 1.47
PRKCD-202ENST00000394729 GPAA1O43292 621 aa24.26■■□□□ 1.47
PRKCD-202ENST00000394729 MCM2P49736 904 aa24.26■■□□□ 1.47
PRKCD-202ENST00000394729 MAGEB6Q8N7X4 407 aa24.26■■□□□ 1.47
PRKCD-202ENST00000394729 CIZ1Q9ULV3 898 aaPredicted RBP24.26■■□□□ 1.47
PRKCD-202ENST00000394729 BAG4O95429 457 aaKnown RBP24.26■■□□□ 1.47
PRKCD-202ENST00000394729 GPHNQ9NQX3 736 aaPredicted RBP24.26■■□□□ 1.47
PRKCD-202ENST00000394729 ONECUT3O60422 494 aaPredicted RBP24.25■■□□□ 1.47
PRKCD-202ENST00000394729 NEK1Q96PY6 1258 aa24.25■■□□□ 1.47
PRKCD-202ENST00000394729 SPEF2Q9C093 1822 aa24.25■■□□□ 1.47
PRKCD-202ENST00000394729 INCENPQ9NQS7 918 aa24.25■■□□□ 1.47
PRKCD-202ENST00000394729 FGFR2P21802 821 aa24.25■■□□□ 1.47
PRKCD-202ENST00000394729 MINPP1Q9UNW1 487 aa24.25■■□□□ 1.47
PRKCD-202ENST00000394729 Q6ZUG5 572 aa24.24■■□□□ 1.47
PRKCD-202ENST00000394729 BRF1Q92994 677 aa24.24■■□□□ 1.47
PRKCD-202ENST00000394729 RC3H1Q5TC82 1133 aaKnown RBP24.24■■□□□ 1.47
PRKCD-202ENST00000394729 PROM2Q8N271 834 aa24.24■■□□□ 1.47
PRKCD-202ENST00000394729 HELLSQ9NRZ9 838 aa24.24■■□□□ 1.47
PRKCD-202ENST00000394729 LRP2BPQ9P2M1 347 aa24.24■■□□□ 1.47
PRKCD-202ENST00000394729 U3KPZ7 1027 aaPredicted RBP24.24■■□□□ 1.47
PRKCD-202ENST00000394729 APBA3O96018 575 aa24.23■■□□□ 1.47
PRKCD-202ENST00000394729 RPS6KB1P23443 525 aa24.23■■□□□ 1.47
PRKCD-202ENST00000394729 PSMA5P28066 241 aa24.23■■□□□ 1.47
PRKCD-202ENST00000394729 CHAF1AQ13111 956 aaPredicted RBP24.23■■□□□ 1.47
PRKCD-202ENST00000394729 SMC3Q9UQE7 1217 aa24.23■■□□□ 1.47
PRKCD-202ENST00000394729 FGAP02671 866 aa24.23■■□□□ 1.47
PRKCD-202ENST00000394729 CNBD1Q8NA66 436 aa24.23■■□□□ 1.47
PRKCD-202ENST00000394729 THSD7AQ9UPZ6 1657 aa24.23■■□□□ 1.47
PRKCD-202ENST00000394729 PRPF40AO75400 957 aaKnown RBP24.22■■□□□ 1.47
PRKCD-202ENST00000394729 RPS8P62241 208 aaKnown RBP24.22■■□□□ 1.47
PRKCD-202ENST00000394729 NUCB2P80303 420 aa24.22■■□□□ 1.47
PRKCD-202ENST00000394729 MSL1Q68DK7 614 aa24.22■■□□□ 1.47
PRKCD-202ENST00000394729 FOXP2O15409 715 aa24.22■■□□□ 1.47
PRKCD-202ENST00000394729 KDM4AO75164 1064 aa24.22■■□□□ 1.47
PRKCD-202ENST00000394729 PDE6AP16499 860 aa24.22■■□□□ 1.47
PRKCD-202ENST00000394729 ST3GAL1Q11201 340 aa24.22■■□□□ 1.47
PRKCD-202ENST00000394729 CUL4AQ13619 759 aa24.22■■□□□ 1.47
PRKCD-202ENST00000394729 TOB2Q14106 344 aaPredicted RBP24.22■■□□□ 1.47
PRKCD-202ENST00000394729 TXNRD1Q16881 649 aa24.22■■□□□ 1.47
PRKCD-202ENST00000394729 COL5A3P25940 1745 aaPredicted RBP24.22■■□□□ 1.47
PRKCD-202ENST00000394729 VPS37CA5D8V6 355 aaPredicted RBP24.21■■□□□ 1.47
PRKCD-202ENST00000394729 SLC4A8Q2Y0W8 1093 aa24.21■■□□□ 1.47
PRKCD-202ENST00000394729 TXNRD3Q86VQ6 643 aa24.21■■□□□ 1.47
PRKCD-202ENST00000394729 DDX11Q96FC9 970 aa24.21■■□□□ 1.47
PRKCD-202ENST00000394729 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.21■■□□□ 1.47
PRKCD-202ENST00000394729 CWC22Q9HCG8 908 aaKnown RBP24.21■■□□□ 1.47
PRKCD-202ENST00000394729 MYO5AQ9Y4I1 1855 aaKnown RBP24.21■■□□□ 1.47
PRKCD-202ENST00000394729 GJB2P29033 226 aa24.21■■□□□ 1.47
PRKCD-202ENST00000394729 CCT2P78371 535 aaKnown RBP24.21■■□□□ 1.47
PRKCD-202ENST00000394729 FERMT3Q86UX7 667 aa24.21■■□□□ 1.47
PRKCD-202ENST00000394729 APPBP2Q92624 585 aa24.21■■□□□ 1.47
PRKCD-202ENST00000394729 ARMT1Q9H993 441 aa24.21■■□□□ 1.47
PRKCD-202ENST00000394729 ANKIB1Q9P2G1 1089 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms