RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 A0A1B0GUA9 196 aa14.38□□□□□ -0.11
SLC28A1-203ENST00000394573 SPDYE1Q8NFV5 336 aaPredicted RBP14.38□□□□□ -0.11
SLC28A1-203ENST00000394573 MPHOSPH8Q99549 860 aa14.38□□□□□ -0.11
SLC28A1-203ENST00000394573 HYPKQ9NX55 129 aa14.38□□□□□ -0.11
SLC28A1-203ENST00000394573 SPG7Q9UQ90 795 aa14.38□□□□□ -0.11
SLC28A1-203ENST00000394573 PTPRGP23470 1445 aa14.38□□□□□ -0.11
SLC28A1-203ENST00000394573 RPGRIP1LQ68CZ1 1315 aa14.38□□□□□ -0.11
SLC28A1-203ENST00000394573 ECEL1O95672 775 aa14.38□□□□□ -0.11
SLC28A1-203ENST00000394573 TUBB4AP04350 444 aa14.38□□□□□ -0.11
SLC28A1-203ENST00000394573 IRAK1P51617 712 aa14.38□□□□□ -0.11
SLC28A1-203ENST00000394573 LARP1Q6PKG0 1096 aaKnown RBP14.38□□□□□ -0.11
SLC28A1-203ENST00000394573 TRIM74Q86UV6 250 aa14.38□□□□□ -0.11
SLC28A1-203ENST00000394573 TRIM73Q86UV7 250 aa14.38□□□□□ -0.11
SLC28A1-203ENST00000394573 MYO5CQ9NQX4 1742 aa14.38□□□□□ -0.11
SLC28A1-203ENST00000394573 RPS6KA3P51812 740 aa14.37□□□□□ -0.11
SLC28A1-203ENST00000394573 COL9A3Q14050 684 aaPredicted RBP14.37□□□□□ -0.11
SLC28A1-203ENST00000394573 KCNB1Q14721 858 aa14.37□□□□□ -0.11
SLC28A1-203ENST00000394573 KLC4Q9NSK0 619 aa14.37□□□□□ -0.11
SLC28A1-203ENST00000394573 PBRM1Q86U86 1689 aa14.37□□□□□ -0.11
SLC28A1-203ENST00000394573 EIF2AK4Q9P2K8 1649 aaKnown RBP14.37□□□□□ -0.11
SLC28A1-203ENST00000394573 ATP10DQ9P241 1426 aa14.37□□□□□ -0.11
SLC28A1-203ENST00000394573 ATP1A3P13637 1013 aa14.37□□□□□ -0.11
SLC28A1-203ENST00000394573 RWDD2BP57060 319 aa14.37□□□□□ -0.11
SLC28A1-203ENST00000394573 PSME1Q06323 249 aa14.37□□□□□ -0.11
SLC28A1-203ENST00000394573 ADCK5Q3MIX3 580 aa14.37□□□□□ -0.11
SLC28A1-203ENST00000394573 MYSM1Q5VVJ2 828 aa14.37□□□□□ -0.11
SLC28A1-203ENST00000394573 NFXL1Q6ZNB6 911 aa14.37□□□□□ -0.11
SLC28A1-203ENST00000394573 TOGARAM2Q6ZUX3 1019 aa14.37□□□□□ -0.11
SLC28A1-203ENST00000394573 KIFC2Q96AC6 838 aa14.37□□□□□ -0.11
SLC28A1-203ENST00000394573 NAT10Q9H0A0 1025 aaKnown RBP14.37□□□□□ -0.11
SLC28A1-203ENST00000394573 TDRD9Q8NDG6 1382 aaKnown RBP14.37□□□□□ -0.11
SLC28A1-203ENST00000394573 ARHGEF40Q8TER5 1519 aa14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 SNUPNO95149 360 aaKnown RBP14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 CAVIN2O95810 425 aa14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 GBP2P32456 591 aaPredicted RBP14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 MRPL12P52815 198 aaKnown RBP14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 STK3Q13188 491 aa14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 THEMIS2Q5TEJ8 643 aa14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 HNRNPLLQ8WVV9 542 aaKnown RBP14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 JAKMIP1Q96N16 626 aaKnown RBP14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 GOLPH3LQ9H4A5 285 aa14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 ANO10Q9NW15 660 aa14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 PIK3R4Q99570 1358 aa14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 CDHR2Q9BYE9 1310 aa14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 PTCH1Q13635 1447 aa14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 CEP152O94986 1710 aa14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 SHTN1A0MZ66 631 aa14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 CCP110O43303 1012 aa14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 PRPF6O94906 941 aaKnown RBP14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 TBC1D25Q3MII6 688 aa14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 DPCR1Q3MIW9 517 aa14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 RNF187Q5TA31 235 aaPredicted RBP14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 C3orf20Q8ND61 904 aa14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 ARHGAP45Q92619 1136 aa14.36□□□□□ -0.11
SLC28A1-203ENST00000394573 A0A0U1RQJ8 604 aa14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 CUTAO60888 179 aa14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 KIAA0754O94854 1291 aa14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 RBBP5Q15291 538 aaKnown RBP14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 SRGAP1Q7Z6B7 1085 aa14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 CCAR1Q8IX12 1150 aaKnown RBP14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 C8orf58Q8NAV2 365 aa14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 ATRIPQ8WXE1 791 aa14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 NUP160Q12769 1436 aa14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 USP4Q13107 963 aa14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 TWISTNBQ3B726 338 aaPredicted RBP14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 HSP90AA4PQ58FG1 418 aa14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 C1QTNF12Q5T7M4 302 aa14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 CEP112Q8N8E3 955 aa14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 DPF2Q92785 391 aa14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 FAM210AQ96ND0 272 aa14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 PAIP2Q9BPZ3 127 aaKnown RBP14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 HINFPQ9BQA5 517 aa14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 LZTFL1Q9NQ48 299 aa14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 TPCN1Q9ULQ1 816 aa14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 DISP1Q96F81 1524 aa14.35□□□□□ -0.11
SLC28A1-203ENST00000394573 A1BGP04217 495 aa14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 MYBL1P10243 752 aa14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 CHGAP10645 457 aaKnown RBP14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 GNGT1P63211 74 aa14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 PDILTQ8N807 584 aa14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 API5Q9BZZ5 524 aaKnown RBP14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 GPATCH8Q9UKJ3 1502 aaKnown RBP14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 IL16Q14005 1332 aa14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 ZSCAN12O43309 604 aa14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 USP5P45974 858 aa14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 WLSQ5T9L3 541 aa14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 RPAP2Q8IXW5 612 aaPredicted RBP14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 FAM135BQ49AJ0 1406 aa14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 ERVK-7P63135 1459 aa14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 KDM5AP29375 1690 aaKnown RBP14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 PPARDQ03181 441 aa14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 TRAF1Q13077 416 aa14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 CFAP70Q5T0N1 1121 aa14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 DNAJC14Q6Y2X3 702 aaPredicted RBP14.34□□□□□ -0.11
SLC28A1-203ENST00000394573 TMEM232C9JQI7 657 aa14.33□□□□□ -0.12
SLC28A1-203ENST00000394573 GGCXP38435 758 aa14.33□□□□□ -0.12
SLC28A1-203ENST00000394573 KCNJ6P48051 423 aa14.33□□□□□ -0.12
SLC28A1-203ENST00000394573 HDGFP51858 240 aaKnown RBP14.33□□□□□ -0.12
SLC28A1-203ENST00000394573 GSPT2Q8IYD1 628 aaKnown RBP14.33□□□□□ -0.12
SLC28A1-203ENST00000394573 RAB21Q9UL25 225 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms