RNA–Protein interactions for RNA: ENST00000394366.6

SRSF5-201, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-201ENST00000394366 CCDC152Q4G0S7 254 aa16.12■□□□□ 0.17
SRSF5-201ENST00000394366 LDHAL6AQ6ZMR3 332 aa16.12■□□□□ 0.17
SRSF5-201ENST00000394366 SYNE4Q8N205 404 aa16.12■□□□□ 0.17
SRSF5-201ENST00000394366 IL17RAQ96F46 866 aa16.12■□□□□ 0.17
SRSF5-201ENST00000394366 NEUROD6Q96NK8 337 aa16.12■□□□□ 0.17
SRSF5-201ENST00000394366 HAUS7Q99871 368 aa16.12■□□□□ 0.17
SRSF5-201ENST00000394366 BOLA2Q9H3K6 86 aa16.12■□□□□ 0.17
SRSF5-201ENST00000394366 DDX60Q8IY21 1712 aaKnown RBP16.12■□□□□ 0.17
SRSF5-201ENST00000394366 A0A1B0GUL7 405 aa16.12■□□□□ 0.17
SRSF5-201ENST00000394366 HCLS1P14317 486 aaPredicted RBP16.12■□□□□ 0.17
SRSF5-201ENST00000394366 SOGA3Q5TF21 947 aa16.12■□□□□ 0.17
SRSF5-201ENST00000394366 C9orf131Q5VYM1 1079 aa16.12■□□□□ 0.17
SRSF5-201ENST00000394366 C3orf67Q6ZVT6 689 aa16.12■□□□□ 0.17
SRSF5-201ENST00000394366 RBM17Q96I25 401 aaKnown RBP16.12■□□□□ 0.17
SRSF5-201ENST00000394366 FSD1Q9BTV5 496 aa16.12■□□□□ 0.17
SRSF5-201ENST00000394366 ST18O60284 1047 aa16.11■□□□□ 0.17
SRSF5-201ENST00000394366 HOXA10P31260 410 aaPredicted RBP16.11■□□□□ 0.17
SRSF5-201ENST00000394366 RASSF7Q02833 373 aa16.11■□□□□ 0.17
SRSF5-201ENST00000394366 PUS3Q9BZE2 481 aaKnown RBP16.11■□□□□ 0.17
SRSF5-201ENST00000394366 CNNM1Q9NRU3 951 aa16.11■□□□□ 0.17
SRSF5-201ENST00000394366 RIPOR2Q9Y4F9 1068 aa16.11■□□□□ 0.17
SRSF5-201ENST00000394366 TNRC6CQ9HCJ0 1690 aaKnown RBP16.11■□□□□ 0.17
SRSF5-201ENST00000394366 MROH5Q6ZUA9 1318 aa16.1■□□□□ 0.17
SRSF5-201ENST00000394366 METTL24Q5JXM2 366 aa16.1■□□□□ 0.17
SRSF5-201ENST00000394366 CCDC158Q5M9N0 1113 aa16.1■□□□□ 0.17
SRSF5-201ENST00000394366 CWC27Q6UX04 472 aaKnown RBP16.1■□□□□ 0.17
SRSF5-201ENST00000394366 CRAMP1Q96RY5 1269 aa16.1■□□□□ 0.17
SRSF5-201ENST00000394366 SNRKQ9NRH2 765 aa16.1■□□□□ 0.17
SRSF5-201ENST00000394366 RNF181Q9P0P0 153 aa16.1■□□□□ 0.17
SRSF5-201ENST00000394366 NFKBIEO00221 500 aa16.09■□□□□ 0.17
SRSF5-201ENST00000394366 LRRFIP1Q32MZ4 808 aaKnown RBP16.09■□□□□ 0.17
SRSF5-201ENST00000394366 C7orf43Q8WVR3 580 aa16.09■□□□□ 0.17
SRSF5-201ENST00000394366 CCDC85AQ96PX6 553 aaPredicted RBP16.09■□□□□ 0.17
SRSF5-201ENST00000394366 K7ELQ4 463 aaPredicted RBP16.08■□□□□ 0.17
SRSF5-201ENST00000394366 LMNB1P20700 586 aa16.08■□□□□ 0.17
SRSF5-201ENST00000394366 TIMM10P62072 90 aa16.08■□□□□ 0.17
SRSF5-201ENST00000394366 CCDC93Q567U6 631 aa16.08■□□□□ 0.17
SRSF5-201ENST00000394366 GORABQ5T7V8 394 aa16.08■□□□□ 0.17
SRSF5-201ENST00000394366 SLX4Q8IY92 1834 aa16.08■□□□□ 0.16
SRSF5-201ENST00000394366 HSPA4P34932 840 aa16.08■□□□□ 0.16
SRSF5-201ENST00000394366 MCM2P49736 904 aa16.08■□□□□ 0.16
SRSF5-201ENST00000394366 ATP2B3Q16720 1220 aa16.08■□□□□ 0.16
SRSF5-201ENST00000394366 LSG1Q9H089 658 aaKnown RBP16.08■□□□□ 0.16
SRSF5-201ENST00000394366 IFIT1P09914 478 aaKnown RBP16.07■□□□□ 0.16
SRSF5-201ENST00000394366 IGHMBP2P38935 993 aaKnown RBP16.07■□□□□ 0.16
SRSF5-201ENST00000394366 KBTBD3Q8NAB2 608 aa16.07■□□□□ 0.16
SRSF5-201ENST00000394366 CDC5LQ99459 802 aaKnown RBP16.07■□□□□ 0.16
SRSF5-201ENST00000394366 DNAJC2Q99543 621 aaKnown RBP16.07■□□□□ 0.16
SRSF5-201ENST00000394366 MPHOSPH8Q99549 860 aa16.07■□□□□ 0.16
SRSF5-201ENST00000394366 TAOK3Q9H2K8 898 aa16.07■□□□□ 0.16
SRSF5-201ENST00000394366 PDE8BO95263 885 aa16.06■□□□□ 0.16
SRSF5-201ENST00000394366 TTC39AQ5SRH9 613 aa16.06■□□□□ 0.16
SRSF5-201ENST00000394366 OLFM4Q6UX06 510 aa16.06■□□□□ 0.16
SRSF5-201ENST00000394366 DDX46Q7L014 1031 aaKnown RBP16.06■□□□□ 0.16
SRSF5-201ENST00000394366 RTKN2Q8IZC4 609 aa16.06■□□□□ 0.16
SRSF5-201ENST00000394366 ZNF526Q8TF50 670 aaPredicted RBP16.06■□□□□ 0.16
SRSF5-201ENST00000394366 XAGE2Q96GT9 111 aa16.06■□□□□ 0.16
SRSF5-201ENST00000394366 ZNF512BQ96KM6 892 aaPredicted RBP16.06■□□□□ 0.16
SRSF5-201ENST00000394366 PAG1Q9NWQ8 432 aa16.06■□□□□ 0.16
SRSF5-201ENST00000394366 LTBP3Q9NS15 1303 aa16.06■□□□□ 0.16
SRSF5-201ENST00000394366 PPEF1O14829 653 aaPredicted RBP16.05■□□□□ 0.16
SRSF5-201ENST00000394366 PRELPP51888 382 aa16.05■□□□□ 0.16
SRSF5-201ENST00000394366 NMIQ13287 307 aaPredicted RBP16.05■□□□□ 0.16
SRSF5-201ENST00000394366 SF3B3Q15393 1217 aaKnown RBP16.05■□□□□ 0.16
SRSF5-201ENST00000394366 PUM3Q15397 648 aaKnown RBP16.05■□□□□ 0.16
SRSF5-201ENST00000394366 CC2D2BQ6DHV5 1058 aa16.05■□□□□ 0.16
SRSF5-201ENST00000394366 VGLL2Q8N8G2 317 aa16.05■□□□□ 0.16
SRSF5-201ENST00000394366 ARAP2Q8WZ64 1704 aa16.05■□□□□ 0.16
SRSF5-201ENST00000394366 LPIN2Q92539 896 aa16.05■□□□□ 0.16
SRSF5-201ENST00000394366 TMX4Q9H1E5 349 aaPredicted RBP16.05■□□□□ 0.16
SRSF5-201ENST00000394366 IL25Q9H293 177 aa16.05■□□□□ 0.16
SRSF5-201ENST00000394366 GPBP1L1Q9HC44 474 aaPredicted RBP16.05■□□□□ 0.16
SRSF5-201ENST00000394366 CCDC171Q6TFL3 1326 aa16.04■□□□□ 0.16
SRSF5-201ENST00000394366 MED23Q9ULK4 1368 aa16.04■□□□□ 0.16
SRSF5-201ENST00000394366 BBOX1O75936 387 aa16.04■□□□□ 0.16
SRSF5-201ENST00000394366 FKBP4Q02790 459 aaKnown RBP eCLIP16.04■□□□□ 0.16
SRSF5-201ENST00000394366 ANTXR1Q9H6X2 564 aa16.04■□□□□ 0.16
SRSF5-201ENST00000394366 CACNA1SQ13698 1873 aa16.03■□□□□ 0.16
SRSF5-201ENST00000394366 HSP90AA1P07900 732 aaKnown RBP16.03■□□□□ 0.16
SRSF5-201ENST00000394366 UQCRFS1P1P0C7P4 283 aa16.03■□□□□ 0.16
SRSF5-201ENST00000394366 GRAPQ13588 217 aa16.03■□□□□ 0.16
SRSF5-201ENST00000394366 GRIPAP1Q4V328 841 aa16.03■□□□□ 0.16
SRSF5-201ENST00000394366 GRAPLQ8TC17 118 aaPredicted RBP16.03■□□□□ 0.16
SRSF5-201ENST00000394366 SLKQ9H2G2 1235 aaPredicted RBP16.03■□□□□ 0.16
SRSF5-201ENST00000394366 CIZ1Q9ULV3 898 aaPredicted RBP16.03■□□□□ 0.16
SRSF5-201ENST00000394366 ZFYP08048 801 aaPredicted RBP16.02■□□□□ 0.16
SRSF5-201ENST00000394366 SLC5A1P13866 664 aa16.02■□□□□ 0.16
SRSF5-201ENST00000394366 RNF20Q5VTR2 975 aa16.02■□□□□ 0.16
SRSF5-201ENST00000394366 FAM227BQ96M60 508 aa16.02■□□□□ 0.16
SRSF5-201ENST00000394366 HELLSQ9NRZ9 838 aa16.02■□□□□ 0.16
SRSF5-201ENST00000394366 CHMP5Q9NZZ3 219 aa16.02■□□□□ 0.16
SRSF5-201ENST00000394366 ATP6V0A2Q9Y487 856 aa16.02■□□□□ 0.16
SRSF5-201ENST00000394366 ZC3H4Q9UPT8 1303 aaKnown RBP16.02■□□□□ 0.16
SRSF5-201ENST00000394366 A0A0D9SFI3 127 aa16.01■□□□□ 0.15
SRSF5-201ENST00000394366 GOLIM4O00461 696 aa16.01■□□□□ 0.15
SRSF5-201ENST00000394366 ZKSCAN1P17029 563 aaPredicted RBP16.01■□□□□ 0.15
SRSF5-201ENST00000394366 NEK4P51957 841 aa16.01■□□□□ 0.15
SRSF5-201ENST00000394366 MCMDC2Q4G0Z9 681 aa16.01■□□□□ 0.15
SRSF5-201ENST00000394366 MAP4K1Q92918 833 aa16.01■□□□□ 0.15
SRSF5-201ENST00000394366 KCNB2Q92953 911 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms