RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 PROSER2Q86WR7 435 aaPredicted RBP21.94■■□□□ 1.1
HOXC6-202ENST00000394331 MST1RQ04912 1400 aa21.94■■□□□ 1.1
HOXC6-202ENST00000394331 HIP1O00291 1037 aa21.94■■□□□ 1.1
HOXC6-202ENST00000394331 NPHP1O15259 732 aa21.94■■□□□ 1.1
HOXC6-202ENST00000394331 TADA3O75528 432 aa21.94■■□□□ 1.1
HOXC6-202ENST00000394331 ACTN2P35609 894 aa21.94■■□□□ 1.1
HOXC6-202ENST00000394331 STX1AQ16623 288 aa21.94■■□□□ 1.1
HOXC6-202ENST00000394331 LARP1Q6PKG0 1096 aaKnown RBP21.94■■□□□ 1.1
HOXC6-202ENST00000394331 LRRN4CLQ8ND94 238 aa21.94■■□□□ 1.1
HOXC6-202ENST00000394331 SUCLG2Q96I99 432 aa21.94■■□□□ 1.1
HOXC6-202ENST00000394331 JRKLQ9Y4A0 524 aa21.94■■□□□ 1.1
HOXC6-202ENST00000394331 KCNB2Q92953 911 aa21.93■■□□□ 1.1
HOXC6-202ENST00000394331 SPATA32Q96LK8 384 aa21.93■■□□□ 1.1
HOXC6-202ENST00000394331 ZNF790Q6PG37 636 aa21.93■■□□□ 1.1
HOXC6-202ENST00000394331 PDIA6Q15084 440 aa21.93■■□□□ 1.1
HOXC6-202ENST00000394331 LEO1Q8WVC0 666 aaPredicted RBP21.93■■□□□ 1.1
HOXC6-202ENST00000394331 ZBTB9Q96C00 473 aa21.93■■□□□ 1.1
HOXC6-202ENST00000394331 NEXNQ0ZGT2 675 aa21.92■■□□□ 1.1
HOXC6-202ENST00000394331 AIMP1Q12904 312 aaKnown RBP21.92■■□□□ 1.1
HOXC6-202ENST00000394331 TTC31Q49AM3 519 aaPredicted RBP21.92■■□□□ 1.1
HOXC6-202ENST00000394331 RIC3Q7Z5B4 369 aa21.92■■□□□ 1.1
HOXC6-202ENST00000394331 USP16Q9Y5T5 823 aa21.92■■□□□ 1.1
HOXC6-202ENST00000394331 ST3GAL1Q11201 340 aa21.92■■□□□ 1.1
HOXC6-202ENST00000394331 KAZALD1Q96I82 304 aa21.92■■□□□ 1.1
HOXC6-202ENST00000394331 BICC1Q9H694 974 aaKnown RBP21.92■■□□□ 1.1
HOXC6-202ENST00000394331 C19orf44Q9H6X5 657 aa21.92■■□□□ 1.1
HOXC6-202ENST00000394331 ADAMTS7Q9UKP4 1686 aa21.92■■□□□ 1.1
HOXC6-202ENST00000394331 C1orf167Q5SNV9 1468 aa21.91■■□□□ 1.1
HOXC6-202ENST00000394331 LARP1BQ659C4 914 aaKnown RBP21.91■■□□□ 1.1
HOXC6-202ENST00000394331 CC2D1AQ6P1N0 951 aaPredicted RBP21.91■■□□□ 1.1
HOXC6-202ENST00000394331 SLC52A2Q9HAB3 445 aa21.91■■□□□ 1.1
HOXC6-202ENST00000394331 TRPM3Q9HCF6 1732 aaPredicted RBP21.91■■□□□ 1.1
HOXC6-202ENST00000394331 LOC102724159A0A0B4J2E5 919 aa21.91■■□□□ 1.1
HOXC6-202ENST00000394331 NR1I2O75469 434 aa21.91■■□□□ 1.1
HOXC6-202ENST00000394331 ETF1P62495 437 aaKnown RBP21.91■■□□□ 1.1
HOXC6-202ENST00000394331 PWP2Q15269 919 aaKnown RBP21.91■■□□□ 1.1
HOXC6-202ENST00000394331 ZSWIM6Q9HCJ5 1215 aa21.91■■□□□ 1.1
HOXC6-202ENST00000394331 SASH3O75995 380 aa21.9■■□□□ 1.1
HOXC6-202ENST00000394331 GYS2P54840 703 aa21.9■■□□□ 1.1
HOXC6-202ENST00000394331 PDRG1Q9NUG6 133 aa21.9■■□□□ 1.1
HOXC6-202ENST00000394331 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.9■■□□□ 1.1
HOXC6-202ENST00000394331 DNAI1Q9UI46 699 aa21.9■■□□□ 1.1
HOXC6-202ENST00000394331 SASH1O94885 1247 aa21.9■■□□□ 1.1
HOXC6-202ENST00000394331 TATP17735 454 aaPredicted RBP21.9■■□□□ 1.1
HOXC6-202ENST00000394331 CHMP3Q9Y3E7 222 aa21.9■■□□□ 1.1
HOXC6-202ENST00000394331 SIPA1L3O60292 1781 aaPredicted RBP21.9■■□□□ 1.1
HOXC6-202ENST00000394331 KIF1AQ12756 1690 aa21.9■■□□□ 1.1
HOXC6-202ENST00000394331 ZC3H6P61129 1189 aaKnown RBP21.9■■□□□ 1.1
HOXC6-202ENST00000394331 LRRFIP1Q32MZ4 808 aaKnown RBP21.9■■□□□ 1.1
HOXC6-202ENST00000394331 CDC37L1Q7L3B6 337 aa21.9■■□□□ 1.1
HOXC6-202ENST00000394331 SUGP1Q8IWZ8 645 aaKnown RBP21.9■■□□□ 1.1
HOXC6-202ENST00000394331 NRDCO43847 1150 aa21.89■■□□□ 1.09
HOXC6-202ENST00000394331 ZKSCAN1P17029 563 aaPredicted RBP21.89■■□□□ 1.09
HOXC6-202ENST00000394331 ATP2B1P20020 1258 aa21.89■■□□□ 1.09
HOXC6-202ENST00000394331 PTH1RQ03431 593 aa21.89■■□□□ 1.09
HOXC6-202ENST00000394331 GPR161Q8N6U8 529 aaKnown RBP21.89■■□□□ 1.09
HOXC6-202ENST00000394331 NLRP2Q9NX02 1062 aa21.89■■□□□ 1.09
HOXC6-202ENST00000394331 IGKV5-2P06315 115 aa21.89■■□□□ 1.09
HOXC6-202ENST00000394331 BRD2P25440 801 aaKnown RBP21.89■■□□□ 1.09
HOXC6-202ENST00000394331 MSL3Q8N5Y2 521 aaKnown RBP21.89■■□□□ 1.09
HOXC6-202ENST00000394331 MNS1Q8NEH6 495 aa21.89■■□□□ 1.09
HOXC6-202ENST00000394331 ZNF622Q969S3 477 aaKnown RBP eCLIP21.89■■□□□ 1.09
HOXC6-202ENST00000394331 EAF2Q96CJ1 260 aaPredicted RBP21.89■■□□□ 1.09
HOXC6-202ENST00000394331 ADAM21Q9UKJ8 722 aa21.89■■□□□ 1.09
HOXC6-202ENST00000394331 CYP46A1Q9Y6A2 500 aa21.89■■□□□ 1.09
HOXC6-202ENST00000394331 ADAMTSL3P82987 1691 aa21.89■■□□□ 1.09
HOXC6-202ENST00000394331 C11orf57Q6ZUT1 292 aaPredicted RBP21.88■■□□□ 1.09
HOXC6-202ENST00000394331 PRPF40BQ6NWY9 871 aaKnown RBP21.88■■□□□ 1.09
HOXC6-202ENST00000394331 DHX40Q8IX18 779 aaKnown RBP21.88■■□□□ 1.09
HOXC6-202ENST00000394331 JAKMIP1Q96N16 626 aaKnown RBP21.88■■□□□ 1.09
HOXC6-202ENST00000394331 PHKG2P15735 406 aa21.87■■□□□ 1.09
HOXC6-202ENST00000394331 SLC39A6Q13433 755 aa21.87■■□□□ 1.09
HOXC6-202ENST00000394331 SWT1Q5T5J6 900 aaKnown RBP21.87■■□□□ 1.09
HOXC6-202ENST00000394331 NECTIN1Q15223 517 aa21.87■■□□□ 1.09
HOXC6-202ENST00000394331 LEKR1Q6ZMV7 388 aa21.87■■□□□ 1.09
HOXC6-202ENST00000394331 TMX1Q9H3N1 280 aa21.87■■□□□ 1.09
HOXC6-202ENST00000394331 NEURL1BA8MQ27 555 aa21.86■■□□□ 1.09
HOXC6-202ENST00000394331 BECN2A8MW95 431 aa21.86■■□□□ 1.09
HOXC6-202ENST00000394331 TSGA10IPQ3SY00 556 aa21.86■■□□□ 1.09
HOXC6-202ENST00000394331 PPM1EQ8WY54 764 aa21.86■■□□□ 1.09
HOXC6-202ENST00000394331 CPP00450 1065 aa21.86■■□□□ 1.09
HOXC6-202ENST00000394331 GCKRQ14397 625 aa21.86■■□□□ 1.09
HOXC6-202ENST00000394331 ME3Q16798 604 aa21.86■■□□□ 1.09
HOXC6-202ENST00000394331 JAKMIP3Q5VZ66 844 aa21.86■■□□□ 1.09
HOXC6-202ENST00000394331 NBPF11Q86T75 865 aa21.86■■□□□ 1.09
HOXC6-202ENST00000394331 PGBD1Q96JS3 809 aa21.86■■□□□ 1.09
HOXC6-202ENST00000394331 METTL22Q9BUU2 404 aaPredicted RBP21.86■■□□□ 1.09
HOXC6-202ENST00000394331 SNRKQ9NRH2 765 aa21.86■■□□□ 1.09
HOXC6-202ENST00000394331 IFNL2Q8IZJ0 200 aa21.86■■□□□ 1.09
HOXC6-202ENST00000394331 BICD2Q8TD16 824 aa21.86■■□□□ 1.09
HOXC6-202ENST00000394331 XAGE3Q8WTP9 111 aa21.86■■□□□ 1.09
HOXC6-202ENST00000394331 ARFGAP3Q9NP61 516 aa21.86■■□□□ 1.09
HOXC6-202ENST00000394331 ANO10Q9NW15 660 aa21.86■■□□□ 1.09
HOXC6-202ENST00000394331 KDM6AO15550 1401 aaPredicted RBP21.85■■□□□ 1.09
HOXC6-202ENST00000394331 SEC31AO94979 1220 aaKnown RBP21.85■■□□□ 1.09
HOXC6-202ENST00000394331 PACS2Q86VP3 889 aa21.85■■□□□ 1.09
HOXC6-202ENST00000394331 CCDC8Q9H0W5 538 aaPredicted RBP21.85■■□□□ 1.09
HOXC6-202ENST00000394331 ZCCHC17Q9NP64 241 aaKnown RBP21.85■■□□□ 1.09
HOXC6-202ENST00000394331 MYL6BP14649 208 aa21.85■■□□□ 1.09
HOXC6-202ENST00000394331 COPS6Q7L5N1 327 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms