RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 COL15A1P39059 1388 aa11.68□□□□□ -0.54
PSEN1-204ENST00000394164 RNF20Q5VTR2 975 aa11.68□□□□□ -0.54
PSEN1-204ENST00000394164 RAB11FIP4Q86YS3 637 aa11.68□□□□□ -0.54
PSEN1-204ENST00000394164 SLAIN2Q9P270 581 aa11.68□□□□□ -0.54
PSEN1-204ENST00000394164 CLIP2Q9UDT6 1046 aa11.68□□□□□ -0.54
PSEN1-204ENST00000394164 TNS3Q68CZ2 1445 aa11.67□□□□□ -0.54
PSEN1-204ENST00000394164 LIG1P18858 919 aa11.67□□□□□ -0.54
PSEN1-204ENST00000394164 FOXO4P98177 505 aa11.67□□□□□ -0.54
PSEN1-204ENST00000394164 TYRO3Q06418 890 aa11.67□□□□□ -0.54
PSEN1-204ENST00000394164 GORABQ5T7V8 394 aa11.67□□□□□ -0.54
PSEN1-204ENST00000394164 CCT2P78371 535 aaKnown RBP11.67□□□□□ -0.54
PSEN1-204ENST00000394164 PI16Q6UXB8 463 aa11.67□□□□□ -0.54
PSEN1-204ENST00000394164 FAM200AQ8TCP9 573 aa11.67□□□□□ -0.54
PSEN1-204ENST00000394164 CBX8Q9HC52 389 aa11.67□□□□□ -0.54
PSEN1-204ENST00000394164 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.67□□□□□ -0.546e-6■□□□□ 8.9
PSEN1-204ENST00000394164 MRVI1Q9Y6F6 885 aa11.67□□□□□ -0.54
PSEN1-204ENST00000394164 HIP1O00291 1037 aa11.66□□□□□ -0.54
PSEN1-204ENST00000394164 IL2RBP14784 551 aa11.66□□□□□ -0.54
PSEN1-204ENST00000394164 HAND2P61296 217 aa11.66□□□□□ -0.54
PSEN1-204ENST00000394164 TOB2Q14106 344 aaPredicted RBP11.66□□□□□ -0.54
PSEN1-204ENST00000394164 Q6ZUG5 572 aa11.66□□□□□ -0.54
PSEN1-204ENST00000394164 BRF1Q92994 677 aa11.66□□□□□ -0.54
PSEN1-204ENST00000394164 FBXW7Q969H0 707 aa11.66□□□□□ -0.54
PSEN1-204ENST00000394164 ZNF446Q9NWS9 450 aa11.66□□□□□ -0.54
PSEN1-204ENST00000394164 PAXBP1Q9Y5B6 917 aa11.66□□□□□ -0.54
PSEN1-204ENST00000394164 CYP21A2P08686 494 aa11.66□□□□□ -0.54
PSEN1-204ENST00000394164 ATP5JP18859 108 aa11.66□□□□□ -0.54
PSEN1-204ENST00000394164 RPS6KB1P23443 525 aa11.66□□□□□ -0.54
PSEN1-204ENST00000394164 PSMA5P28066 241 aa11.66□□□□□ -0.54
PSEN1-204ENST00000394164 TTLL5Q6EMB2 1281 aa11.66□□□□□ -0.54
PSEN1-204ENST00000394164 DNAJC10Q8IXB1 793 aa11.66□□□□□ -0.54
PSEN1-204ENST00000394164 LRRN4CLQ8ND94 238 aa11.66□□□□□ -0.54
PSEN1-204ENST00000394164 FEZ2Q9UHY8 353 aaPredicted RBP11.66□□□□□ -0.54
PSEN1-204ENST00000394164 ADORA1P30542 326 aa11.65□□□□□ -0.54
PSEN1-204ENST00000394164 RAD51AP2Q09MP3 1159 aa11.65□□□□□ -0.54
PSEN1-204ENST00000394164 ATG9AQ7Z3C6 839 aa11.65□□□□□ -0.54
PSEN1-204ENST00000394164 FILIP1Q7Z7B0 1213 aa11.65□□□□□ -0.54
PSEN1-204ENST00000394164 WDR17Q8IZU2 1322 aa11.65□□□□□ -0.54
PSEN1-204ENST00000394164 PCDH11XQ9BZA7 1347 aa11.65□□□□□ -0.54
PSEN1-204ENST00000394164 PCDH11YQ9BZA8 1340 aa11.65□□□□□ -0.54
PSEN1-204ENST00000394164 N4BP2Q86UW6 1770 aaPredicted RBP11.65□□□□□ -0.54
PSEN1-204ENST00000394164 A0A087WWV3 80 aa11.65□□□□□ -0.54
PSEN1-204ENST00000394164 ZNF75DP51815 510 aa11.65□□□□□ -0.54
PSEN1-204ENST00000394164 GUCY1B3Q02153 619 aa11.65□□□□□ -0.54
PSEN1-204ENST00000394164 PTPN14Q15678 1187 aa11.65□□□□□ -0.54
PSEN1-204ENST00000394164 DNAJC25Q9H1X3 360 aa11.65□□□□□ -0.54
PSEN1-204ENST00000394164 TMOD3Q9NYL9 352 aa11.65□□□□□ -0.54
PSEN1-204ENST00000394164 A0A1B0GUL7 405 aa11.65□□□□□ -0.55
PSEN1-204ENST00000394164 CASP7P55210 303 aa11.65□□□□□ -0.55
PSEN1-204ENST00000394164 MAP3K11Q16584 847 aa11.65□□□□□ -0.55
PSEN1-204ENST00000394164 WASHC4Q2M389 1173 aa11.65□□□□□ -0.55
PSEN1-204ENST00000394164 ERCC6LQ2NKX8 1250 aa11.65□□□□□ -0.55
PSEN1-204ENST00000394164 TMEM87AQ8NBN3 555 aa11.65□□□□□ -0.55
PSEN1-204ENST00000394164 NEK1Q96PY6 1258 aa11.65□□□□□ -0.55
PSEN1-204ENST00000394164 NUP62CLQ9H1M0 184 aa11.65□□□□□ -0.55
PSEN1-204ENST00000394164 NCOA5Q9HCD5 579 aaKnown RBP11.65□□□□□ -0.55
PSEN1-204ENST00000394164 PAG1Q9NWQ8 432 aa11.65□□□□□ -0.55
PSEN1-204ENST00000394164 ZNF609O15014 1411 aa11.65□□□□□ -0.55
PSEN1-204ENST00000394164 OVOS2A0A0G2JMS6 1433 aa11.64□□□□□ -0.55
PSEN1-204ENST00000394164 TULP2O00295 520 aa11.64□□□□□ -0.55
PSEN1-204ENST00000394164 IFIT1P09914 478 aaKnown RBP11.64□□□□□ -0.55
PSEN1-204ENST00000394164 MCMDC2Q4G0Z9 681 aa11.64□□□□□ -0.55
PSEN1-204ENST00000394164 ZSCAN31Q96LW9 406 aaPredicted RBP11.64□□□□□ -0.55
PSEN1-204ENST00000394164 SH2B1Q9NRF2 756 aaPredicted RBP11.64□□□□□ -0.55
PSEN1-204ENST00000394164 APOBRQ0VD83 1088 aa11.64□□□□□ -0.55
PSEN1-204ENST00000394164 SYCP1Q15431 976 aa11.64□□□□□ -0.55
PSEN1-204ENST00000394164 RABL6Q3YEC7 729 aaPredicted RBP11.64□□□□□ -0.55
PSEN1-204ENST00000394164 STOX1Q6ZVD7 989 aa11.64□□□□□ -0.55
PSEN1-204ENST00000394164 TM6SF1Q9BZW5 370 aa11.64□□□□□ -0.55
PSEN1-204ENST00000394164 TNMDQ9H2S6 317 aa11.64□□□□□ -0.55
PSEN1-204ENST00000394164 GPHNQ9NQX3 736 aaPredicted RBP11.64□□□□□ -0.55
PSEN1-204ENST00000394164 BTG4Q9NY30 223 aa11.64□□□□□ -0.55
PSEN1-204ENST00000394164 STRCP1A6NGW2 1772 aa11.64□□□□□ -0.55
PSEN1-204ENST00000394164 H7C1W4 665 aa11.63□□□□□ -0.55
PSEN1-204ENST00000394164 CCDC57Q2TAC2 916 aa11.63□□□□□ -0.55
PSEN1-204ENST00000394164 C10orf67Q8IYJ2 551 aa11.63□□□□□ -0.55
PSEN1-204ENST00000394164 IL17RAQ96F46 866 aa11.63□□□□□ -0.55
PSEN1-204ENST00000394164 DACT1Q9NYF0 836 aa11.63□□□□□ -0.55
PSEN1-204ENST00000394164 RSPH14Q9UHP6 348 aa11.63□□□□□ -0.55
PSEN1-204ENST00000394164 GOLGA6L4A6NEF3 574 aa11.63□□□□□ -0.55
PSEN1-204ENST00000394164 GYS2P54840 703 aa11.63□□□□□ -0.55
PSEN1-204ENST00000394164 TTC6Q86TZ1 520 aa11.63□□□□□ -0.55
PSEN1-204ENST00000394164 HAUS7Q99871 368 aa11.63□□□□□ -0.55
PSEN1-204ENST00000394164 PHRF1Q9P1Y6 1649 aaKnown RBP11.63□□□□□ -0.55
PSEN1-204ENST00000394164 MED23Q9ULK4 1368 aa11.63□□□□□ -0.55
PSEN1-204ENST00000394164 CAMTA1Q9Y6Y1 1673 aa11.63□□□□□ -0.55
PSEN1-204ENST00000394164 SCN11AQ9UI33 1791 aa11.63□□□□□ -0.55
PSEN1-204ENST00000394164 TRIM66O15016 1216 aa11.62□□□□□ -0.55
PSEN1-204ENST00000394164 EPB41L2O43491 1005 aaKnown RBP11.62□□□□□ -0.55
PSEN1-204ENST00000394164 HLFQ16534 295 aa11.62□□□□□ -0.55
PSEN1-204ENST00000394164 FTOQ9C0B1 505 aaKnown RBP eCLIP11.62□□□□□ -0.55
PSEN1-204ENST00000394164 ATP6V1DQ9Y5K8 247 aa11.62□□□□□ -0.55
PSEN1-204ENST00000394164 ALS2Q96Q42 1657 aa11.62□□□□□ -0.55
PSEN1-204ENST00000394164 SIPA1L3O60292 1781 aaPredicted RBP11.62□□□□□ -0.55
PSEN1-204ENST00000394164 H3BQV1 296 aa11.62□□□□□ -0.55
PSEN1-204ENST00000394164 CYP2C19P33261 490 aa11.62□□□□□ -0.55
PSEN1-204ENST00000394164 SCARF1Q14162 830 aa11.62□□□□□ -0.55
PSEN1-204ENST00000394164 IFFO2Q5TF58 517 aa11.62□□□□□ -0.55
PSEN1-204ENST00000394164 HELBQ8NG08 1087 aaPredicted RBP11.62□□□□□ -0.55
PSEN1-204ENST00000394164 PIGBQ92521 554 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms