RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 COA1Q9GZY4 146 aa22.38■■□□□ 1.17
SNRPA1-202ENST00000394082 MYH16Q9H6N6 1097 aa22.38■■□□□ 1.17
SNRPA1-202ENST00000394082 TSKSQ9UJT2 592 aa22.38■■□□□ 1.17
SNRPA1-202ENST00000394082 CSF1RP07333 972 aa22.37■■□□□ 1.17
SNRPA1-202ENST00000394082 IGHMBP2P38935 993 aaKnown RBP22.37■■□□□ 1.17
SNRPA1-202ENST00000394082 STRIP1Q5VSL9 837 aa22.37■■□□□ 1.17
SNRPA1-202ENST00000394082 ANGEL2Q5VTE6 544 aaKnown RBP22.37■■□□□ 1.17
SNRPA1-202ENST00000394082 UBE3BQ7Z3V4 1068 aa22.37■■□□□ 1.17
SNRPA1-202ENST00000394082 REM2Q8IYK8 340 aaPredicted RBP22.37■■□□□ 1.17
SNRPA1-202ENST00000394082 LINS1Q8NG48 757 aa22.37■■□□□ 1.17
SNRPA1-202ENST00000394082 CDCA5Q96FF9 252 aa22.37■■□□□ 1.17
SNRPA1-202ENST00000394082 ZIC5Q96T25 663 aa22.37■■□□□ 1.17
SNRPA1-202ENST00000394082 ASTN2O75129 1339 aaPredicted RBP22.36■■□□□ 1.17
SNRPA1-202ENST00000394082 ZNF157P51786 506 aaPredicted RBP22.36■■□□□ 1.17
SNRPA1-202ENST00000394082 CASP7P55210 303 aa22.36■■□□□ 1.17
SNRPA1-202ENST00000394082 DACT2Q5SW24 774 aa22.36■■□□□ 1.17
SNRPA1-202ENST00000394082 DNAAF4Q8WXU2 420 aa22.36■■□□□ 1.17
SNRPA1-202ENST00000394082 ANKRD2Q9GZV1 360 aa22.36■■□□□ 1.17
SNRPA1-202ENST00000394082 SLC10A3P09131 477 aa22.35■■□□□ 1.17
SNRPA1-202ENST00000394082 FANCIQ9NVI1 1328 aa22.34■■□□□ 1.17
SNRPA1-202ENST00000394082 ITGA6P23229 1130 aa22.34■■□□□ 1.17
SNRPA1-202ENST00000394082 RGS19P49795 217 aa22.34■■□□□ 1.17
SNRPA1-202ENST00000394082 OGFOD1Q8N543 542 aa22.34■■□□□ 1.17
SNRPA1-202ENST00000394082 ZNF646O15015 1829 aaPredicted RBP22.34■■□□□ 1.17
SNRPA1-202ENST00000394082 PAPPA2Q9BXP8 1791 aa22.33■■□□□ 1.17
SNRPA1-202ENST00000394082 WTIPA6NIX2 430 aaPredicted RBP22.33■■□□□ 1.17
SNRPA1-202ENST00000394082 VAMP4O75379 141 aa22.33■■□□□ 1.17
SNRPA1-202ENST00000394082 KIF23Q02241 960 aaPredicted RBP22.33■■□□□ 1.17
SNRPA1-202ENST00000394082 FKBP5Q13451 457 aaPredicted RBP22.33■■□□□ 1.17
SNRPA1-202ENST00000394082 SPEF2Q9C093 1822 aa22.33■■□□□ 1.16
SNRPA1-202ENST00000394082 ZNF804BA4D1E1 1349 aa22.32■■□□□ 1.16
SNRPA1-202ENST00000394082 MPHOSPH8Q99549 860 aa22.32■■□□□ 1.16
SNRPA1-202ENST00000394082 MRS2Q9HD23 443 aa22.32■■□□□ 1.16
SNRPA1-202ENST00000394082 CASP8AP2Q9UKL3 1982 aa22.32■■□□□ 1.16
SNRPA1-202ENST00000394082 MCOLN1Q9GZU1 580 aa22.31■■□□□ 1.16
SNRPA1-202ENST00000394082 FAM161AQ3B820 660 aa22.3■■□□□ 1.16
SNRPA1-202ENST00000394082 TXNRD3Q86VQ6 643 aa22.3■■□□□ 1.16
SNRPA1-202ENST00000394082 CSRNP1Q96S65 589 aa22.3■■□□□ 1.16
SNRPA1-202ENST00000394082 CCDC85CA6NKD9 419 aa22.29■■□□□ 1.16
SNRPA1-202ENST00000394082 WNT10BO00744 389 aa22.29■■□□□ 1.16
SNRPA1-202ENST00000394082 NBPF9Q3BBW0 867 aa22.29■■□□□ 1.16
SNRPA1-202ENST00000394082 TTLL5Q6EMB2 1281 aa22.29■■□□□ 1.16
SNRPA1-202ENST00000394082 C15orf52Q6ZUT6 534 aaKnown RBP22.29■■□□□ 1.16
SNRPA1-202ENST00000394082 RASAL3Q86YV0 1011 aa22.29■■□□□ 1.16
SNRPA1-202ENST00000394082 RNF186Q9NXI6 227 aa22.29■■□□□ 1.16
SNRPA1-202ENST00000394082 ANKRD18BA2A2Z9 1011 aa22.28■■□□□ 1.16
SNRPA1-202ENST00000394082 ANP32CO43423 234 aa22.28■■□□□ 1.16
SNRPA1-202ENST00000394082 AKAP11Q9UKA4 1901 aa22.27■■□□□ 1.16
SNRPA1-202ENST00000394082 CHRNDQ07001 517 aa22.27■■□□□ 1.16
SNRPA1-202ENST00000394082 DGKZQ13574 1117 aa22.27■■□□□ 1.16
SNRPA1-202ENST00000394082 HDAC9Q9UKV0 1011 aa22.27■■□□□ 1.16
SNRPA1-202ENST00000394082 ZEB1P37275 1124 aaPredicted RBP22.26■■□□□ 1.15
SNRPA1-202ENST00000394082 EXOSC9Q06265 439 aaKnown RBP22.26■■□□□ 1.15
SNRPA1-202ENST00000394082 BEND3Q5T5X7 828 aa22.26■■□□□ 1.15
SNRPA1-202ENST00000394082 IRS2Q9Y4H2 1338 aa22.26■■□□□ 1.15
SNRPA1-202ENST00000394082 TRPA1O75762 1119 aa22.25■■□□□ 1.15
SNRPA1-202ENST00000394082 FOXO4P98177 505 aa22.25■■□□□ 1.15
SNRPA1-202ENST00000394082 IFIT5Q13325 482 aaKnown RBP22.25■■□□□ 1.15
SNRPA1-202ENST00000394082 ZBED3Q96IU2 234 aaPredicted RBP22.25■■□□□ 1.15
SNRPA1-202ENST00000394082 MXD3Q9BW11 206 aa22.25■■□□□ 1.15
SNRPA1-202ENST00000394082 CD209Q9NNX6 404 aa22.25■■□□□ 1.15
SNRPA1-202ENST00000394082 KLRK1P26718 216 aa22.24■■□□□ 1.15
SNRPA1-202ENST00000394082 NF2P35240 595 aa22.24■■□□□ 1.15
SNRPA1-202ENST00000394082 KCNJ4P48050 445 aa22.24■■□□□ 1.15
SNRPA1-202ENST00000394082 MLLT1Q03111 559 aaPredicted RBP22.24■■□□□ 1.15
SNRPA1-202ENST00000394082 APOBEC3FQ8IUX4 373 aaKnown RBP22.24■■□□□ 1.15
SNRPA1-202ENST00000394082 COL1A1P02452 1464 aaPredicted RBP22.23■■□□□ 1.15
SNRPA1-202ENST00000394082 FBXW7Q969H0 707 aa22.23■■□□□ 1.15
SNRPA1-202ENST00000394082 FKBP1AP62942 108 aaKnown RBP22.22■■□□□ 1.15
SNRPA1-202ENST00000394082 GTF2IP78347 998 aa22.22■■□□□ 1.15
SNRPA1-202ENST00000394082 MTMR14Q8NCE2 650 aa22.22■■□□□ 1.15
SNRPA1-202ENST00000394082 GRM8O00222 908 aa22.21■■□□□ 1.15
SNRPA1-202ENST00000394082 IL1R1P14778 569 aa22.21■■□□□ 1.15
SNRPA1-202ENST00000394082 KIAA0825Q8IV33 1275 aa22.21■■□□□ 1.15
SNRPA1-202ENST00000394082 F6X3S4 739 aa22.2■■□□□ 1.14
SNRPA1-202ENST00000394082 UBE2Q2LH0YL09 131 aa22.2■■□□□ 1.14
SNRPA1-202ENST00000394082 TM4SF4P48230 202 aa22.2■■□□□ 1.14
SNRPA1-202ENST00000394082 NOM1Q5C9Z4 860 aaKnown RBP22.2■■□□□ 1.14
SNRPA1-202ENST00000394082 SPINK5Q9NQ38 1064 aaPredicted RBP22.2■■□□□ 1.14
SNRPA1-202ENST00000394082 ZNF316A6NFI3 1004 aaPredicted RBP22.19■■□□□ 1.14
SNRPA1-202ENST00000394082 ALDH1L1O75891 902 aa22.19■■□□□ 1.14
SNRPA1-202ENST00000394082 SASH1O94885 1247 aa22.19■■□□□ 1.14
SNRPA1-202ENST00000394082 CCDC57Q2TAC2 916 aa22.19■■□□□ 1.14
SNRPA1-202ENST00000394082 PRAMEF18Q5VWM3 479 aa22.19■■□□□ 1.14
SNRPA1-202ENST00000394082 MOB2Q70IA6 237 aa22.19■■□□□ 1.14
SNRPA1-202ENST00000394082 ARMC9Q7Z3E5 817 aa22.19■■□□□ 1.14
SNRPA1-202ENST00000394082 ZNF804AQ7Z570 1209 aa22.19■■□□□ 1.14
SNRPA1-202ENST00000394082 SCAF8Q9UPN6 1271 aaKnown RBP22.19■■□□□ 1.14
SNRPA1-202ENST00000394082 SALL2Q9Y467 1007 aaPredicted RBP22.19■■□□□ 1.14
SNRPA1-202ENST00000394082 A0A1B0GUL6 1792 aa22.19■■□□□ 1.14
SNRPA1-202ENST00000394082 LMBR1LQ6UX01 489 aa22.18■■□□□ 1.14
SNRPA1-202ENST00000394082 PPP2R3BQ9Y5P8 575 aa22.18■■□□□ 1.14
SNRPA1-202ENST00000394082 UNCXA6NJT0 531 aa22.17■■□□□ 1.14
SNRPA1-202ENST00000394082 TAF5LO75529 589 aa22.17■■□□□ 1.14
SNRPA1-202ENST00000394082 TTLL12Q14166 644 aaPredicted RBP22.17■■□□□ 1.14
SNRPA1-202ENST00000394082 DLGAP5Q15398 846 aa22.17■■□□□ 1.14
SNRPA1-202ENST00000394082 LDLRAD1Q5T700 205 aa22.17■■□□□ 1.14
SNRPA1-202ENST00000394082 LDHAL6AQ6ZMR3 332 aa22.17■■□□□ 1.14
SNRPA1-202ENST00000394082 CTU1Q7Z7A3 348 aaKnown RBP22.17■■□□□ 1.14
SNRPA1-202ENST00000394082 CERS5Q8N5B7 392 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms