RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 HEG1Q9ULI3 1381 aa26.45■■□□□ 1.83
RARA-202ENST00000394081 IKBKBO14920 756 aa26.45■■□□□ 1.82
RARA-202ENST00000394081 SMC2O95347 1197 aa26.45■■□□□ 1.82
RARA-202ENST00000394081 CTDNEP1O95476 244 aa26.45■■□□□ 1.82
RARA-202ENST00000394081 PSME1Q06323 249 aa26.45■■□□□ 1.82
RARA-202ENST00000394081 TEFQ10587 303 aa26.45■■□□□ 1.82
RARA-202ENST00000394081 CCDC158Q5M9N0 1113 aa26.45■■□□□ 1.82
RARA-202ENST00000394081 DNAI1Q9UI46 699 aa26.45■■□□□ 1.82
RARA-202ENST00000394081 BTBD11A6QL63 1104 aa26.44■■□□□ 1.82
RARA-202ENST00000394081 ZBTB22O15209 634 aa26.44■■□□□ 1.82
RARA-202ENST00000394081 HNRNPH2P55795 449 aaKnown RBP26.44■■□□□ 1.82
RARA-202ENST00000394081 FTOQ9C0B1 505 aaKnown RBP eCLIP26.44■■□□□ 1.82
RARA-202ENST00000394081 PCDHA7Q9UN72 937 aa26.44■■□□□ 1.82
RARA-202ENST00000394081 ANKARQ7Z5J8 1434 aa26.44■■□□□ 1.82
RARA-202ENST00000394081 NPHP1O15259 732 aa26.44■■□□□ 1.82
RARA-202ENST00000394081 TADA3O75528 432 aa26.44■■□□□ 1.82
RARA-202ENST00000394081 DDX58O95786 925 aaKnown RBP26.44■■□□□ 1.82
RARA-202ENST00000394081 ANXA1P04083 346 aa26.44■■□□□ 1.82
RARA-202ENST00000394081 LRRFIP1Q32MZ4 808 aaKnown RBP26.44■■□□□ 1.82
RARA-202ENST00000394081 MCMDC2Q4G0Z9 681 aa26.44■■□□□ 1.82
RARA-202ENST00000394081 LGR6Q9HBX8 967 aa26.44■■□□□ 1.82
RARA-202ENST00000394081 KDM4FA0A1W2PPD8 638 aa26.43■■□□□ 1.82
RARA-202ENST00000394081 NLRP12P59046 1061 aa26.43■■□□□ 1.82
RARA-202ENST00000394081 CWF19L2Q2TBE0 894 aaKnown RBP26.43■■□□□ 1.82
RARA-202ENST00000394081 HOMER1Q86YM7 354 aa26.43■■□□□ 1.82
RARA-202ENST00000394081 MNS1Q8NEH6 495 aa26.43■■□□□ 1.82
RARA-202ENST00000394081 KCNG4Q8TDN1 519 aa26.43■■□□□ 1.82
RARA-202ENST00000394081 AKAP4Q5JQC9 854 aa26.42■■□□□ 1.82
RARA-202ENST00000394081 ZNF609O15014 1411 aa26.42■■□□□ 1.82
RARA-202ENST00000394081 MYO1BO43795 1136 aa26.42■■□□□ 1.82
RARA-202ENST00000394081 YEATS4O95619 227 aa26.42■■□□□ 1.82
RARA-202ENST00000394081 DPCR1Q3MIW9 517 aa26.42■■□□□ 1.82
RARA-202ENST00000394081 LRRN4CLQ8ND94 238 aa26.42■■□□□ 1.82
RARA-202ENST00000394081 ZNF274Q96GC6 653 aaPredicted RBP26.42■■□□□ 1.82
RARA-202ENST00000394081 KCNQ3O43525 872 aa26.41■■□□□ 1.82
RARA-202ENST00000394081 ILDR1Q86SU0 546 aaPredicted RBP26.41■■□□□ 1.82
RARA-202ENST00000394081 LAMA4Q16363 1823 aa26.41■■□□□ 1.82
RARA-202ENST00000394081 RGPD8O14715 1765 aaPredicted RBP26.41■■□□□ 1.82
RARA-202ENST00000394081 SH3TC1Q8TE82 1336 aa26.41■■□□□ 1.82
RARA-202ENST00000394081 CAPN2P17655 700 aa26.41■■□□□ 1.82
RARA-202ENST00000394081 GPS2Q13227 327 aa26.41■■□□□ 1.82
RARA-202ENST00000394081 TRIM65Q6PJ69 517 aa26.41■■□□□ 1.82
RARA-202ENST00000394081 TMX1Q9H3N1 280 aa26.41■■□□□ 1.82
RARA-202ENST00000394081 NEDD4P46934 1319 aa26.4■■□□□ 1.82
RARA-202ENST00000394081 CBFA2T2O43439 604 aa26.4■■□□□ 1.82
RARA-202ENST00000394081 EXOSC10Q01780 885 aaKnown RBP26.4■■□□□ 1.82
RARA-202ENST00000394081 NCAPHQ15003 741 aa26.4■■□□□ 1.82
RARA-202ENST00000394081 LINC00301Q8NCQ3 95 aa26.4■■□□□ 1.82
RARA-202ENST00000394081 POLR3EQ9NVU0 708 aa26.4■■□□□ 1.82
RARA-202ENST00000394081 FBXL16Q8N461 479 aa26.39■■□□□ 1.82
RARA-202ENST00000394081 MPHOSPH8Q99549 860 aa26.39■■□□□ 1.82
RARA-202ENST00000394081 A0A087WWV3 80 aa26.39■■□□□ 1.81
RARA-202ENST00000394081 ZSCAN12O43309 604 aa26.39■■□□□ 1.81
RARA-202ENST00000394081 SLC3A2P08195 630 aaKnown RBP26.39■■□□□ 1.81
RARA-202ENST00000394081 NDUFA8P51970 172 aa26.39■■□□□ 1.81
RARA-202ENST00000394081 RGS22Q8NE09 1264 aa26.39■■□□□ 1.81
RARA-202ENST00000394081 IPO4Q8TEX9 1081 aaKnown RBP26.39■■□□□ 1.81
RARA-202ENST00000394081 COPRSQ9NQ92 184 aa26.39■■□□□ 1.81
RARA-202ENST00000394081 GOLGA6L9A6NEM1 432 aa26.37■■□□□ 1.81
RARA-202ENST00000394081 GPR161Q8N6U8 529 aaKnown RBP26.37■■□□□ 1.81
RARA-202ENST00000394081 LTV1Q96GA3 475 aaPredicted RBP26.37■■□□□ 1.81
RARA-202ENST00000394081 DSCC1Q9BVC3 393 aa26.37■■□□□ 1.81
RARA-202ENST00000394081 ESF1Q9H501 851 aaKnown RBP26.37■■□□□ 1.81
RARA-202ENST00000394081 CARMIL3Q8ND23 1372 aa26.37■■□□□ 1.81
RARA-202ENST00000394081 FANCCQ00597 558 aa26.37■■□□□ 1.81
RARA-202ENST00000394081 STOX1Q6ZVD7 989 aa26.37■■□□□ 1.81
RARA-202ENST00000394081 A0A1B0GVL5 298 aa26.36■■□□□ 1.81
RARA-202ENST00000394081 IP6K1Q92551 441 aa26.36■■□□□ 1.81
RARA-202ENST00000394081 HAUS7Q99871 368 aa26.36■■□□□ 1.81
RARA-202ENST00000394081 PROSER3Q2NL68 480 aa26.36■■□□□ 1.81
RARA-202ENST00000394081 SIL1Q9H173 461 aa26.36■■□□□ 1.81
RARA-202ENST00000394081 DBNLQ9UJU6 430 aaKnown RBP26.36■■□□□ 1.81
RARA-202ENST00000394081 PARP3Q9Y6F1 533 aa26.36■■□□□ 1.81
RARA-202ENST00000394081 LTN1O94822 1766 aa26.36■■□□□ 1.81
RARA-202ENST00000394081 APOBRQ0VD83 1088 aa26.35■■□□□ 1.81
RARA-202ENST00000394081 STK38Q15208 465 aa26.35■■□□□ 1.81
RARA-202ENST00000394081 BRAPQ7Z569 592 aa26.35■■□□□ 1.81
RARA-202ENST00000394081 USHBP1Q8N6Y0 703 aa26.35■■□□□ 1.81
RARA-202ENST00000394081 DDX21Q9NR30 783 aaKnown RBP eCLIP26.35■■□□□ 1.81
RARA-202ENST00000394081 EVCP57679 992 aa26.35■■□□□ 1.81
RARA-202ENST00000394081 RAD51AP2Q09MP3 1159 aa26.35■■□□□ 1.81
RARA-202ENST00000394081 TNNI3KQ59H18 835 aa26.35■■□□□ 1.81
RARA-202ENST00000394081 REXO1L1PQ8IX06 675 aa26.35■■□□□ 1.81
RARA-202ENST00000394081 PSD3Q9NYI0 1048 aa26.35■■□□□ 1.81
RARA-202ENST00000394081 FPGT-TNNI3KV9GXZ4 949 aa26.35■■□□□ 1.81
RARA-202ENST00000394081 SF3A1Q15459 793 aaKnown RBP26.34■■□□□ 1.81
RARA-202ENST00000394081 PLEKHO1Q53GL0 409 aaPredicted RBP26.34■■□□□ 1.81
RARA-202ENST00000394081 EDC3Q96F86 508 aaKnown RBP26.34■■□□□ 1.81
RARA-202ENST00000394081 HELLSQ9NRZ9 838 aa26.34■■□□□ 1.81
RARA-202ENST00000394081 PALLDQ8WX93 1383 aa26.34■■□□□ 1.81
RARA-202ENST00000394081 PDIA3P30101 505 aaKnown RBP26.34■■□□□ 1.81
RARA-202ENST00000394081 MLECQ14165 292 aa26.34■■□□□ 1.81
RARA-202ENST00000394081 AMOTQ4VCS5 1084 aa26.34■■□□□ 1.81
RARA-202ENST00000394081 JAKMIP3Q5VZ66 844 aa26.34■■□□□ 1.81
RARA-202ENST00000394081 ERCC4Q92889 916 aaPredicted RBP26.34■■□□□ 1.81
RARA-202ENST00000394081 LRRC2Q9BYS8 371 aa26.34■■□□□ 1.81
RARA-202ENST00000394081 FEZ2Q9UHY8 353 aaPredicted RBP26.34■■□□□ 1.81
RARA-202ENST00000394081 URI1O94763 535 aaPredicted RBP26.33■■□□□ 1.81
RARA-202ENST00000394081 TBC1D8O95759 1140 aa26.33■■□□□ 1.81
RARA-202ENST00000394081 CC2D1AQ6P1N0 951 aaPredicted RBP26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms