RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 HAND2P61296 217 aa17.39■□□□□ 0.37
CDH16-202ENST00000394055 SCRN1Q12765 414 aa17.39■□□□□ 0.37
CDH16-202ENST00000394055 DHX32Q7L7V1 743 aaKnown RBP17.39■□□□□ 0.37
CDH16-202ENST00000394055 TFIP11Q9UBB9 837 aaKnown RBP17.39■□□□□ 0.37
CDH16-202ENST00000394055 RIPOR2Q9Y4F9 1068 aa17.39■□□□□ 0.37
CDH16-202ENST00000394055 ANKRD18BA2A2Z9 1011 aa17.39■□□□□ 0.37
CDH16-202ENST00000394055 TTC6Q86TZ1 520 aa17.39■□□□□ 0.37
CDH16-202ENST00000394055 UBN2Q6ZU65 1347 aa17.38■□□□□ 0.37
CDH16-202ENST00000394055 CDHR2Q9BYE9 1310 aa17.38■□□□□ 0.37
CDH16-202ENST00000394055 COL16A1Q07092 1604 aaPredicted RBP17.38■□□□□ 0.37
CDH16-202ENST00000394055 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.38■□□□□ 0.37
CDH16-202ENST00000394055 FBXO3Q9UK99 471 aa17.38■□□□□ 0.37
CDH16-202ENST00000394055 LRP6O75581 1613 aa17.38■□□□□ 0.37
CDH16-202ENST00000394055 CCT2P78371 535 aaKnown RBP17.38■□□□□ 0.37
CDH16-202ENST00000394055 KRT85P78386 507 aa17.38■□□□□ 0.37
CDH16-202ENST00000394055 CSPP1Q1MSJ5 1256 aa17.38■□□□□ 0.37
CDH16-202ENST00000394055 GIMAP6Q6P9H5 292 aa17.37■□□□□ 0.37
CDH16-202ENST00000394055 PRDM4Q9UKN5 801 aa17.37■□□□□ 0.37
CDH16-202ENST00000394055 HELBQ8NG08 1087 aaPredicted RBP17.37■□□□□ 0.37
CDH16-202ENST00000394055 PUS7LQ9H0K6 701 aaKnown RBP17.37■□□□□ 0.37
CDH16-202ENST00000394055 LAMA4Q16363 1823 aa17.36■□□□□ 0.37
CDH16-202ENST00000394055 HMGB1P09429 215 aaKnown RBP17.36■□□□□ 0.37
CDH16-202ENST00000394055 MCAMP43121 646 aa17.36■□□□□ 0.37
CDH16-202ENST00000394055 NCOA5Q9HCD5 579 aaKnown RBP17.36■□□□□ 0.37
CDH16-202ENST00000394055 NUTM2BA6NNL0 878 aaPredicted RBP17.36■□□□□ 0.37
CDH16-202ENST00000394055 NUTM2EB1AL46 878 aaPredicted RBP17.36■□□□□ 0.37
CDH16-202ENST00000394055 FOXP2O15409 715 aa17.36■□□□□ 0.37
CDH16-202ENST00000394055 NUTM2AQ8IVF1 878 aaPredicted RBP17.36■□□□□ 0.37
CDH16-202ENST00000394055 PDLIM2Q96JY6 352 aa17.36■□□□□ 0.37
CDH16-202ENST00000394055 HCLS1P14317 486 aaPredicted RBP17.35■□□□□ 0.37
CDH16-202ENST00000394055 IL6STP40189 918 aaPredicted RBP17.35■□□□□ 0.37
CDH16-202ENST00000394055 FAM184AQ8NB25 1140 aa17.35■□□□□ 0.37
CDH16-202ENST00000394055 GPHNQ9NQX3 736 aaPredicted RBP17.35■□□□□ 0.37
CDH16-202ENST00000394055 H3BQV1 296 aa17.35■□□□□ 0.37
CDH16-202ENST00000394055 EXOSC10Q01780 885 aaKnown RBP17.35■□□□□ 0.37
CDH16-202ENST00000394055 DDB1Q16531 1140 aa17.35■□□□□ 0.37
CDH16-202ENST00000394055 IFFO2Q5TF58 517 aa17.35■□□□□ 0.37
CDH16-202ENST00000394055 DOT1LQ8TEK3 1739 aa17.35■□□□□ 0.37
CDH16-202ENST00000394055 PDE8AO60658 829 aa17.34■□□□□ 0.37
CDH16-202ENST00000394055 PFKFB2O60825 505 aa17.34■□□□□ 0.37
CDH16-202ENST00000394055 LRRFIP1Q32MZ4 808 aaKnown RBP17.34■□□□□ 0.37
CDH16-202ENST00000394055 NUP98P52948 1817 aa17.34■□□□□ 0.37
CDH16-202ENST00000394055 SPEF2Q9C093 1822 aa17.34■□□□□ 0.37
CDH16-202ENST00000394055 SNAP23O00161 211 aa17.34■□□□□ 0.37
CDH16-202ENST00000394055 ATP6V1AP38606 617 aa17.34■□□□□ 0.37
CDH16-202ENST00000394055 ZSCAN30Q86W11 494 aa17.34■□□□□ 0.37
CDH16-202ENST00000394055 APPBP2Q92624 585 aa17.34■□□□□ 0.37
CDH16-202ENST00000394055 PDCL3Q9H2J4 239 aa17.34■□□□□ 0.37
CDH16-202ENST00000394055 CTDNEP1O95476 244 aa17.33■□□□□ 0.36
CDH16-202ENST00000394055 FGAP02671 866 aa17.33■□□□□ 0.36
CDH16-202ENST00000394055 ZFYP08048 801 aaPredicted RBP17.33■□□□□ 0.36
CDH16-202ENST00000394055 VGLL2Q8N8G2 317 aa17.33■□□□□ 0.36
CDH16-202ENST00000394055 NSUN7Q8NE18 718 aaKnown RBP17.33■□□□□ 0.36
CDH16-202ENST00000394055 SPATA32Q96LK8 384 aa17.33■□□□□ 0.36
CDH16-202ENST00000394055 PTPDC1A2A3K4 754 aa17.33■□□□□ 0.36
CDH16-202ENST00000394055 ERVV-1B6SEH8 477 aa17.33■□□□□ 0.36
CDH16-202ENST00000394055 GPAA1O43292 621 aa17.33■□□□□ 0.36
CDH16-202ENST00000394055 IDH1O75874 414 aaKnown RBP17.33■□□□□ 0.36
CDH16-202ENST00000394055 LIG1P18858 919 aa17.33■□□□□ 0.36
CDH16-202ENST00000394055 PHKA1P46020 1223 aa17.33■□□□□ 0.36
CDH16-202ENST00000394055 SUSD4Q5VX71 490 aa17.33■□□□□ 0.36
CDH16-202ENST00000394055 ZNF34Q8IZ26 560 aa17.33■□□□□ 0.36
CDH16-202ENST00000394055 PDE8BO95263 885 aa17.32■□□□□ 0.36
CDH16-202ENST00000394055 CRKLP46109 303 aaKnown RBP17.32■□□□□ 0.36
CDH16-202ENST00000394055 INTS5Q6P9B9 1019 aaKnown RBP17.32■□□□□ 0.36
CDH16-202ENST00000394055 SPATA31A1Q5TZJ5 1347 aa17.32■□□□□ 0.36
CDH16-202ENST00000394055 ANKRD36CQ5JPF3 1778 aa17.32■□□□□ 0.36
CDH16-202ENST00000394055 PDIA4P13667 645 aaKnown RBP17.32■□□□□ 0.36
CDH16-202ENST00000394055 IMMTQ16891 758 aaKnown RBP17.32■□□□□ 0.36
CDH16-202ENST00000394055 MARCH10Q8NA82 808 aaPredicted RBP17.32■□□□□ 0.36
CDH16-202ENST00000394055 PIH1D3Q9NQM4 214 aaKnown RBP17.32■□□□□ 0.36
CDH16-202ENST00000394055 CCDC87Q9NVE4 849 aa17.32■□□□□ 0.36
CDH16-202ENST00000394055 SLIT2O94813 1529 aa17.32■□□□□ 0.36
CDH16-202ENST00000394055 PLCH1Q4KWH8 1693 aa17.31■□□□□ 0.36
CDH16-202ENST00000394055 EIF5P55010 431 aaKnown RBP17.31■□□□□ 0.36
CDH16-202ENST00000394055 CEBPZQ03701 1054 aaKnown RBP17.31■□□□□ 0.36
CDH16-202ENST00000394055 RESTQ13127 1097 aa17.31■□□□□ 0.36
CDH16-202ENST00000394055 CAMK4Q16566 473 aa17.31■□□□□ 0.36
CDH16-202ENST00000394055 SLC9C2Q5TAH2 1124 aa17.31■□□□□ 0.36
CDH16-202ENST00000394055 TICAM2Q86XR7 235 aa17.31■□□□□ 0.36
CDH16-202ENST00000394055 RAB11FIP4Q86YS3 637 aa17.31■□□□□ 0.36
CDH16-202ENST00000394055 SMARCC2Q8TAQ2 1214 aa17.31■□□□□ 0.36
CDH16-202ENST00000394055 GOLGA6L4A6NEF3 574 aa17.31■□□□□ 0.36
CDH16-202ENST00000394055 LETM1O95202 739 aaPredicted RBP17.31■□□□□ 0.36
CDH16-202ENST00000394055 MSNP26038 577 aaKnown RBP17.31■□□□□ 0.36
CDH16-202ENST00000394055 GUCY1B3Q02153 619 aa17.31■□□□□ 0.36
CDH16-202ENST00000394055 CCDC102BQ68D86 513 aa17.31■□□□□ 0.36
CDH16-202ENST00000394055 LEO1Q8WVC0 666 aaPredicted RBP17.31■□□□□ 0.36
CDH16-202ENST00000394055 MYH3P11055 1940 aa17.31■□□□□ 0.36
CDH16-202ENST00000394055 PDIA3P30101 505 aaKnown RBP17.3■□□□□ 0.36
CDH16-202ENST00000394055 ITPK1Q13572 414 aa17.3■□□□□ 0.36
CDH16-202ENST00000394055 MPNDQ8N594 471 aa17.3■□□□□ 0.36
CDH16-202ENST00000394055 AGXT2Q9BYV1 514 aa17.3■□□□□ 0.36
CDH16-202ENST00000394055 BCL11BQ9C0K0 894 aaPredicted RBP17.3■□□□□ 0.36
CDH16-202ENST00000394055 SEC31BQ9NQW1 1179 aa17.3■□□□□ 0.36
CDH16-202ENST00000394055 USP25Q9UHP3 1055 aa17.3■□□□□ 0.36
CDH16-202ENST00000394055 CTNNA3Q9UI47 895 aa17.3■□□□□ 0.36
CDH16-202ENST00000394055 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.3■□□□□ 0.36
CDH16-202ENST00000394055 SCAND2PQ9GZW5 306 aaPredicted RBP17.3■□□□□ 0.36
CDH16-202ENST00000394055 AHDC1Q5TGY3 1603 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms