RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 MXD3Q9BW11 206 aa9.63□□□□□ -0.87
HMGB3P1-201ENST00000393368 CLEC11AQ9Y240 323 aa9.63□□□□□ -0.87
HMGB3P1-201ENST00000393368 IPO8O15397 1037 aaKnown RBP9.62□□□□□ -0.87
HMGB3P1-201ENST00000393368 RLBP1P12271 317 aa9.62□□□□□ -0.87
HMGB3P1-201ENST00000393368 HSPA6P17066 643 aa9.62□□□□□ -0.87
HMGB3P1-201ENST00000393368 LMOD1P29536 600 aaPredicted RBP9.62□□□□□ -0.87
HMGB3P1-201ENST00000393368 TNIP1Q15025 636 aa9.62□□□□□ -0.87
HMGB3P1-201ENST00000393368 MAP1SQ66K74 1059 aaPredicted RBP9.62□□□□□ -0.87
HMGB3P1-201ENST00000393368 FBXW7Q969H0 707 aa9.62□□□□□ -0.87
HMGB3P1-201ENST00000393368 ANKRD2Q9GZV1 360 aa9.62□□□□□ -0.87
HMGB3P1-201ENST00000393368 GPRC5DQ9NZD1 345 aa9.62□□□□□ -0.87
HMGB3P1-201ENST00000393368 LEMD3Q9Y2U8 911 aa9.62□□□□□ -0.87
HMGB3P1-201ENST00000393368 IRS2Q9Y4H2 1338 aa9.61□□□□□ -0.87
HMGB3P1-201ENST00000393368 A0A1B0GUL6 1792 aa9.61□□□□□ -0.87
HMGB3P1-201ENST00000393368 EGFRP00533 1210 aa9.61□□□□□ -0.87
HMGB3P1-201ENST00000393368 RFX5P48382 616 aaPredicted RBP9.61□□□□□ -0.87
HMGB3P1-201ENST00000393368 FSTL1Q12841 308 aa9.61□□□□□ -0.87
HMGB3P1-201ENST00000393368 CHADLQ6NUI6 762 aa9.61□□□□□ -0.87
HMGB3P1-201ENST00000393368 LDHDQ86WU2 507 aa9.61□□□□□ -0.87
HMGB3P1-201ENST00000393368 MICALL2Q8IY33 904 aa9.61□□□□□ -0.87
HMGB3P1-201ENST00000393368 TRPM4Q8TD43 1214 aa9.61□□□□□ -0.87
HMGB3P1-201ENST00000393368 PANK1Q8TE04 598 aa9.61□□□□□ -0.87
HMGB3P1-201ENST00000393368 SIL1Q9H173 461 aa9.61□□□□□ -0.87
HMGB3P1-201ENST00000393368 C1orf115Q9H7X2 142 aa9.61□□□□□ -0.87
HMGB3P1-201ENST00000393368 PA2G4Q9UQ80 394 aaKnown RBP9.61□□□□□ -0.87
HMGB3P1-201ENST00000393368 JAG2Q9Y219 1238 aa9.61□□□□□ -0.87
HMGB3P1-201ENST00000393368 RIPOR2Q9Y4F9 1068 aa9.61□□□□□ -0.87
HMGB3P1-201ENST00000393368 ADAMTSL1Q8N6G6 1762 aa9.6□□□□□ -0.87
HMGB3P1-201ENST00000393368 PTPN12Q05209 780 aaKnown RBP9.6□□□□□ -0.87
HMGB3P1-201ENST00000393368 FMR1Q06787 632 aaKnown RBP eCLIP9.6□□□□□ -0.87
HMGB3P1-201ENST00000393368 TBC1D10BQ4KMP7 808 aaPredicted RBP9.6□□□□□ -0.87
HMGB3P1-201ENST00000393368 METTL24Q5JXM2 366 aa9.6□□□□□ -0.87
HMGB3P1-201ENST00000393368 SAMD7Q7Z3H4 446 aa9.6□□□□□ -0.87
HMGB3P1-201ENST00000393368 ITPRIPQ8IWB1 547 aa9.6□□□□□ -0.87
HMGB3P1-201ENST00000393368 FTSJ3Q8IY81 847 aaKnown RBP9.6□□□□□ -0.87
HMGB3P1-201ENST00000393368 CNOT7Q9UIV1 285 aaKnown RBP9.6□□□□□ -0.87
HMGB3P1-201ENST00000393368 SCN9AQ15858 1988 aa9.6□□□□□ -0.87
HMGB3P1-201ENST00000393368 SCN4AP35499 1836 aa9.6□□□□□ -0.87
HMGB3P1-201ENST00000393368 VIL1P09327 827 aaKnown RBP9.59□□□□□ -0.87
HMGB3P1-201ENST00000393368 GYG1P46976 350 aa9.59□□□□□ -0.87
HMGB3P1-201ENST00000393368 HIRAP54198 1017 aaPredicted RBP9.59□□□□□ -0.87
HMGB3P1-201ENST00000393368 RBM26Q5T8P6 1007 aaKnown RBP9.59□□□□□ -0.87
HMGB3P1-201ENST00000393368 RSBN1LQ6PCB5 846 aaPredicted RBP9.59□□□□□ -0.87
HMGB3P1-201ENST00000393368 PODNQ7Z5L7 613 aa9.59□□□□□ -0.87
HMGB3P1-201ENST00000393368 PNMA8AQ86V59 439 aaPredicted RBP9.59□□□□□ -0.87
HMGB3P1-201ENST00000393368 DZIP1LQ8IYY4 767 aaKnown RBP9.59□□□□□ -0.87
HMGB3P1-201ENST00000393368 COA1Q9GZY4 146 aa9.59□□□□□ -0.87
HMGB3P1-201ENST00000393368 ADARB2Q9NS39 739 aaKnown RBP9.59□□□□□ -0.87
HMGB3P1-201ENST00000393368 RCAN3Q9UKA8 241 aa9.59□□□□□ -0.87
HMGB3P1-201ENST00000393368 USP17L3A6NCW0 530 aa9.58□□□□□ -0.88
HMGB3P1-201ENST00000393368 USP17L4A6NCW7 530 aa9.58□□□□□ -0.88
HMGB3P1-201ENST00000393368 EYA2O00167 538 aa9.58□□□□□ -0.88
HMGB3P1-201ENST00000393368 TRAF5O00463 557 aa9.58□□□□□ -0.88
HMGB3P1-201ENST00000393368 SRGAP3O43295 1099 aa9.58□□□□□ -0.88
HMGB3P1-201ENST00000393368 GNAI3P08754 354 aa9.58□□□□□ -0.88
HMGB3P1-201ENST00000393368 GTF2IP78347 998 aa9.58□□□□□ -0.88
HMGB3P1-201ENST00000393368 DACT2Q5SW24 774 aa9.58□□□□□ -0.88
HMGB3P1-201ENST00000393368 DLK2Q6UY11 383 aa9.58□□□□□ -0.88
HMGB3P1-201ENST00000393368 USP50Q70EL3 339 aaPredicted RBP9.58□□□□□ -0.88
HMGB3P1-201ENST00000393368 USP17L1Q7RTZ2 530 aa9.58□□□□□ -0.88
HMGB3P1-201ENST00000393368 ATG9AQ7Z3C6 839 aa9.58□□□□□ -0.88
HMGB3P1-201ENST00000393368 VGLL2Q8N8G2 317 aa9.58□□□□□ -0.88
HMGB3P1-201ENST00000393368 CD209Q9NNX6 404 aa9.58□□□□□ -0.88
HMGB3P1-201ENST00000393368 IQSEC3Q9UPP2 1182 aaPredicted RBP9.58□□□□□ -0.88
HMGB3P1-201ENST00000393368 ASTN2O75129 1339 aaPredicted RBP9.57□□□□□ -0.88
HMGB3P1-201ENST00000393368 MROH5Q6ZUA9 1318 aa9.57□□□□□ -0.88
HMGB3P1-201ENST00000393368 PNMA6EA0A0J9YXQ4 647 aa9.57□□□□□ -0.88
HMGB3P1-201ENST00000393368 H7C1D1 291 aa9.57□□□□□ -0.88
HMGB3P1-201ENST00000393368 ITGBL1O95965 494 aaPredicted RBP9.57□□□□□ -0.88
HMGB3P1-201ENST00000393368 GNAI2P04899 355 aa9.57□□□□□ -0.88
HMGB3P1-201ENST00000393368 APLP1P51693 650 aa9.57□□□□□ -0.88
HMGB3P1-201ENST00000393368 ZNF804AQ7Z570 1209 aa9.57□□□□□ -0.88
HMGB3P1-201ENST00000393368 CNTROBQ8N137 903 aa9.57□□□□□ -0.88
HMGB3P1-201ENST00000393368 DPF2Q92785 391 aa9.57□□□□□ -0.88
HMGB3P1-201ENST00000393368 GMLQ99445 158 aa9.57□□□□□ -0.88
HMGB3P1-201ENST00000393368 GLIS2Q9BZE0 524 aaPredicted RBP9.57□□□□□ -0.88
HMGB3P1-201ENST00000393368 PASKQ96RG2 1323 aa9.56□□□□□ -0.88
HMGB3P1-201ENST00000393368 ZNF646O15015 1829 aaPredicted RBP9.56□□□□□ -0.88
HMGB3P1-201ENST00000393368 F8W031 263 aaPredicted RBP9.56□□□□□ -0.88
HMGB3P1-201ENST00000393368 PDE8BO95263 885 aa9.56□□□□□ -0.88
HMGB3P1-201ENST00000393368 RPS12P25398 132 aaKnown RBP9.56□□□□□ -0.88
HMGB3P1-201ENST00000393368 UBE4AQ14139 1066 aa9.56□□□□□ -0.88
HMGB3P1-201ENST00000393368 KIF4BQ2VIQ3 1234 aa9.56□□□□□ -0.88
HMGB3P1-201ENST00000393368 C20orf194Q5TEA3 1177 aa9.56□□□□□ -0.88
HMGB3P1-201ENST00000393368 TTLL5Q6EMB2 1281 aa9.56□□□□□ -0.88
HMGB3P1-201ENST00000393368 C15orf52Q6ZUT6 534 aaKnown RBP9.56□□□□□ -0.88
HMGB3P1-201ENST00000393368 KIAA0825Q8IV33 1275 aa9.56□□□□□ -0.88
HMGB3P1-201ENST00000393368 CERS5Q8N5B7 392 aa9.56□□□□□ -0.88
HMGB3P1-201ENST00000393368 FAM84BQ96KN1 310 aaPredicted RBP9.56□□□□□ -0.88
HMGB3P1-201ENST00000393368 SCAF8Q9UPN6 1271 aaKnown RBP9.56□□□□□ -0.88
HMGB3P1-201ENST00000393368 COG6Q9Y2V7 657 aa9.56□□□□□ -0.88
HMGB3P1-201ENST00000393368 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.56□□□□□ -0.88
HMGB3P1-201ENST00000393368 ADM5C9JUS6 153 aa9.55□□□□□ -0.88
HMGB3P1-201ENST00000393368 ZBTB7BO15156 539 aaPredicted RBP9.55□□□□□ -0.88
HMGB3P1-201ENST00000393368 SASH1O94885 1247 aa9.55□□□□□ -0.88
HMGB3P1-201ENST00000393368 USP17L8P0C7I0 530 aa9.55□□□□□ -0.88
HMGB3P1-201ENST00000393368 IL1R1P14778 569 aa9.55□□□□□ -0.88
HMGB3P1-201ENST00000393368 FGFR2P21802 821 aa9.55□□□□□ -0.88
HMGB3P1-201ENST00000393368 HIBADHP31937 336 aaKnown RBP9.55□□□□□ -0.88
HMGB3P1-201ENST00000393368 BCAMP50895 628 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms