RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 TAF1LQ8IZX4 1826 aa17.98■□□□□ 0.47
MKS1-202ENST00000393119 RNF113AO15541 343 aaKnown RBP17.97■□□□□ 0.47
MKS1-202ENST00000393119 APBA3O96018 575 aa17.97■□□□□ 0.47
MKS1-202ENST00000393119 AK2P54819 239 aa17.97■□□□□ 0.47
MKS1-202ENST00000393119 SF3B3Q15393 1217 aaKnown RBP17.97■□□□□ 0.47
MKS1-202ENST00000393119 ZNF827Q17R98 1081 aa17.97■□□□□ 0.47
MKS1-202ENST00000393119 CHAMP1Q96JM3 812 aa17.97■□□□□ 0.47
MKS1-202ENST00000393119 PUS7LQ9H0K6 701 aaKnown RBP17.97■□□□□ 0.47
MKS1-202ENST00000393119 LARGE1O95461 756 aa17.97■□□□□ 0.47
MKS1-202ENST00000393119 GYS1P13807 737 aa17.97■□□□□ 0.47
MKS1-202ENST00000393119 WASHC4Q2M389 1173 aa17.97■□□□□ 0.47
MKS1-202ENST00000393119 ZMYM1Q5SVZ6 1142 aa17.97■□□□□ 0.47
MKS1-202ENST00000393119 ZNF772Q68DY9 489 aaPredicted RBP17.97■□□□□ 0.47
MKS1-202ENST00000393119 TTLL5Q6EMB2 1281 aa17.97■□□□□ 0.47
MKS1-202ENST00000393119 POTEAQ6S8J7 498 aa17.97■□□□□ 0.47
MKS1-202ENST00000393119 TPTE2Q6XPS3 522 aa17.97■□□□□ 0.47
MKS1-202ENST00000393119 HMG20BQ9P0W2 317 aa17.97■□□□□ 0.47
MKS1-202ENST00000393119 GYG1P46976 350 aa17.96■□□□□ 0.47
MKS1-202ENST00000393119 RASGRF1Q13972 1273 aa17.96■□□□□ 0.47
MKS1-202ENST00000393119 ANKRD18AQ8IVF6 992 aa17.96■□□□□ 0.47
MKS1-202ENST00000393119 TTC14Q96N46 770 aa17.96■□□□□ 0.47
MKS1-202ENST00000393119 SPEF2Q9C093 1822 aa17.96■□□□□ 0.47
MKS1-202ENST00000393119 SSFA2P28290 1259 aa17.96■□□□□ 0.47
MKS1-202ENST00000393119 TM4SF1P30408 202 aa17.96■□□□□ 0.47
MKS1-202ENST00000393119 SLC10A5Q5PT55 438 aa17.96■□□□□ 0.47
MKS1-202ENST00000393119 FOXD4L5Q5VV16 416 aaPredicted RBP17.96■□□□□ 0.47
MKS1-202ENST00000393119 RUFY3Q7L099 469 aa17.96■□□□□ 0.47
MKS1-202ENST00000393119 FOXD4L4Q8WXT5 416 aaPredicted RBP17.96■□□□□ 0.47
MKS1-202ENST00000393119 NLRP3Q96P20 1036 aa17.96■□□□□ 0.47
MKS1-202ENST00000393119 MINPP1Q9UNW1 487 aa17.96■□□□□ 0.47
MKS1-202ENST00000393119 SCN7AQ01118 1682 aa17.96■□□□□ 0.46
MKS1-202ENST00000393119 IDH1O75874 414 aaKnown RBP17.95■□□□□ 0.46
MKS1-202ENST00000393119 IL17RAQ96F46 866 aa17.95■□□□□ 0.46
MKS1-202ENST00000393119 WWC3Q9ULE0 1092 aa17.95■□□□□ 0.46
MKS1-202ENST00000393119 FOXP2O15409 715 aa17.95■□□□□ 0.46
MKS1-202ENST00000393119 RXRBP28702 533 aa17.95■□□□□ 0.46
MKS1-202ENST00000393119 CYP21A2P08686 494 aa17.94■□□□□ 0.46
MKS1-202ENST00000393119 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.94■□□□□ 0.46
MKS1-202ENST00000393119 KCNB2Q92953 911 aa17.94■□□□□ 0.46
MKS1-202ENST00000393119 TNPO1Q92973 898 aaKnown RBP17.94■□□□□ 0.46
MKS1-202ENST00000393119 CDC5LQ99459 802 aaKnown RBP17.94■□□□□ 0.46
MKS1-202ENST00000393119 LRP5O75197 1615 aa17.94■□□□□ 0.46
MKS1-202ENST00000393119 SLC5A1P13866 664 aa17.94■□□□□ 0.46
MKS1-202ENST00000393119 C4AP0C0L4 1744 aa17.93■□□□□ 0.46
MKS1-202ENST00000393119 HSPD1P10809 573 aaKnown RBP17.93■□□□□ 0.46
MKS1-202ENST00000393119 STOX1Q6ZVD7 989 aa17.93■□□□□ 0.46
MKS1-202ENST00000393119 NYXQ9GZU5 481 aa17.93■□□□□ 0.46
MKS1-202ENST00000393119 SLC9C2Q5TAH2 1124 aa17.93■□□□□ 0.46
MKS1-202ENST00000393119 PRR5LQ6MZQ0 368 aa17.93■□□□□ 0.46
MKS1-202ENST00000393119 LRRC2Q9BYS8 371 aa17.93■□□□□ 0.46
MKS1-202ENST00000393119 RTL9Q8NET4 1388 aa17.92■□□□□ 0.46
MKS1-202ENST00000393119 EPB41L2O43491 1005 aaKnown RBP17.92■□□□□ 0.46
MKS1-202ENST00000393119 ARID4AP29374 1257 aaPredicted RBP17.92■□□□□ 0.46
MKS1-202ENST00000393119 RPS8P62241 208 aaKnown RBP17.92■□□□□ 0.46
MKS1-202ENST00000393119 DDR1Q08345 913 aa17.92■□□□□ 0.46
MKS1-202ENST00000393119 SPATA5Q8NB90 893 aa17.92■□□□□ 0.46
MKS1-202ENST00000393119 GPR101Q96P66 508 aaPredicted RBP17.92■□□□□ 0.46
MKS1-202ENST00000393119 ZSWIM6Q9HCJ5 1215 aa17.92■□□□□ 0.46
MKS1-202ENST00000393119 PDRG1Q9NUG6 133 aa17.92■□□□□ 0.46
MKS1-202ENST00000393119 BSDC1Q9NW68 430 aaPredicted RBP17.92■□□□□ 0.46
MKS1-202ENST00000393119 TFCP2L1Q9NZI6 479 aa17.92■□□□□ 0.46
MKS1-202ENST00000393119 JAG2Q9Y219 1238 aa17.92■□□□□ 0.46
MKS1-202ENST00000393119 ZKSCAN1P17029 563 aaPredicted RBP17.91■□□□□ 0.46
MKS1-202ENST00000393119 SLC27A3Q5K4L6 730 aa17.91■□□□□ 0.46
MKS1-202ENST00000393119 HELLSQ9NRZ9 838 aa17.91■□□□□ 0.46
MKS1-202ENST00000393119 CARMIL3Q8ND23 1372 aa17.91■□□□□ 0.46
MKS1-202ENST00000393119 HAND2P61296 217 aa17.91■□□□□ 0.46
MKS1-202ENST00000393119 TXNRD3Q86VQ6 643 aa17.91■□□□□ 0.46
MKS1-202ENST00000393119 CNBD1Q8NA66 436 aa17.91■□□□□ 0.46
MKS1-202ENST00000393119 NECAB1Q8N987 351 aa17.9■□□□□ 0.46
MKS1-202ENST00000393119 ZNF532Q9HCE3 1301 aa17.9■□□□□ 0.46
MKS1-202ENST00000393119 SERPINB2P05120 415 aa17.9■□□□□ 0.46
MKS1-202ENST00000393119 CHST3Q7LGC8 479 aa17.9■□□□□ 0.46
MKS1-202ENST00000393119 COL23A1Q86Y22 540 aaPredicted RBP17.9■□□□□ 0.46
MKS1-202ENST00000393119 ZDHHC9Q9Y397 364 aa17.9■□□□□ 0.46
MKS1-202ENST00000393119 CYP46A1Q9Y6A2 500 aa17.9■□□□□ 0.46
MKS1-202ENST00000393119 AKAP11Q9UKA4 1901 aa17.9■□□□□ 0.46
MKS1-202ENST00000393119 TNRC6CQ9HCJ0 1690 aaKnown RBP17.89■□□□□ 0.46
MKS1-202ENST00000393119 HSP90B1P14625 803 aaKnown RBP17.89■□□□□ 0.45
MKS1-202ENST00000393119 RAB3GAP1Q15042 981 aa17.89■□□□□ 0.45
MKS1-202ENST00000393119 ADD2P35612 726 aa17.89■□□□□ 0.45
MKS1-202ENST00000393119 ST3GAL1Q11201 340 aa17.89■□□□□ 0.45
MKS1-202ENST00000393119 MSL1Q68DK7 614 aa17.89■□□□□ 0.45
MKS1-202ENST00000393119 NKX2-3Q8TAU0 364 aa17.89■□□□□ 0.45
MKS1-202ENST00000393119 DENND2AQ9ULE3 1009 aa17.89■□□□□ 0.45
MKS1-202ENST00000393119 TPCN1Q9ULQ1 816 aa17.89■□□□□ 0.45
MKS1-202ENST00000393119 RFX7Q2KHR2 1363 aa17.89■□□□□ 0.45
MKS1-202ENST00000393119 MYO5AQ9Y4I1 1855 aaKnown RBP17.88■□□□□ 0.45
MKS1-202ENST00000393119 GPAA1O43292 621 aa17.88■□□□□ 0.45
MKS1-202ENST00000393119 ZNF512BQ96KM6 892 aaPredicted RBP17.88■□□□□ 0.45
MKS1-202ENST00000393119 RPAP1Q9BWH6 1393 aaPredicted RBP17.88■□□□□ 0.45
MKS1-202ENST00000393119 PDE6AP16499 860 aa17.88■□□□□ 0.45
MKS1-202ENST00000393119 CUL4AQ13619 759 aa17.88■□□□□ 0.45
MKS1-202ENST00000393119 ME3Q16798 604 aa17.88■□□□□ 0.45
MKS1-202ENST00000393119 MAGEB6Q8N7X4 407 aa17.88■□□□□ 0.45
MKS1-202ENST00000393119 FAM84BQ96KN1 310 aaPredicted RBP17.88■□□□□ 0.45
MKS1-202ENST00000393119 CCDC83Q8IWF9 413 aa17.87■□□□□ 0.45
MKS1-202ENST00000393119 APPBP2Q92624 585 aa17.87■□□□□ 0.45
MKS1-202ENST00000393119 LAMB2P55268 1798 aa17.87■□□□□ 0.45
MKS1-202ENST00000393119 TCRBV5S4A2TA0A5A2 114 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms