RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.28□□□□□ -0.44
CALD1-203ENST00000393118 PRC1O43663 620 aa12.28□□□□□ -0.44
CALD1-203ENST00000393118 MCM5P33992 734 aa12.28□□□□□ -0.44
CALD1-203ENST00000393118 NCOA7Q8NI08 942 aa12.28□□□□□ -0.44
CALD1-203ENST00000393118 PPP1R9BQ96SB3 815 aa12.28□□□□□ -0.44
CALD1-203ENST00000393118 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.28□□□□□ -0.442e-7■■■□□ 15.9
CALD1-203ENST00000393118 UVSSAQ2YD98 709 aa12.28□□□□□ -0.44
CALD1-203ENST00000393118 CERS3Q8IU89 383 aa12.28□□□□□ -0.44
CALD1-203ENST00000393118 CYP21A2P08686 494 aa12.28□□□□□ -0.44
CALD1-203ENST00000393118 LIG1P18858 919 aa12.28□□□□□ -0.44
CALD1-203ENST00000393118 TTC6Q86TZ1 520 aa12.28□□□□□ -0.44
CALD1-203ENST00000393118 CEP57L1Q8IYX8 460 aa12.28□□□□□ -0.44
CALD1-203ENST00000393118 ZSCAN16Q9H4T2 348 aaPredicted RBP12.28□□□□□ -0.44
CALD1-203ENST00000393118 ASAP1Q9ULH1 1129 aa12.28□□□□□ -0.44
CALD1-203ENST00000393118 SALL3Q9BXA9 1300 aa12.27□□□□□ -0.44
CALD1-203ENST00000393118 FAM200AQ8TCP9 573 aa12.27□□□□□ -0.44
CALD1-203ENST00000393118 CCDC34Q96HJ3 373 aa12.27□□□□□ -0.44
CALD1-203ENST00000393118 PRDM4Q9UKN5 801 aa12.27□□□□□ -0.44
CALD1-203ENST00000393118 TPM3P06753 285 aa12.27□□□□□ -0.45
CALD1-203ENST00000393118 ITGA6P23229 1130 aa12.27□□□□□ -0.45
CALD1-203ENST00000393118 ZAP70P43403 619 aa12.27□□□□□ -0.45
CALD1-203ENST00000393118 DZIP3Q86Y13 1208 aaKnown RBP12.27□□□□□ -0.45
CALD1-203ENST00000393118 HAUS7Q99871 368 aa12.27□□□□□ -0.45
CALD1-203ENST00000393118 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.27□□□□□ -0.45
CALD1-203ENST00000393118 NOL7Q9UMY1 257 aaKnown RBP12.27□□□□□ -0.45
CALD1-203ENST00000393118 IFIT3O14879 490 aaKnown RBP12.27□□□□□ -0.45
CALD1-203ENST00000393118 MAP3K12Q12852 859 aa12.27□□□□□ -0.45
CALD1-203ENST00000393118 CLEC17AQ6ZS10 378 aa12.27□□□□□ -0.45
CALD1-203ENST00000393118 TTC14Q96N46 770 aa12.27□□□□□ -0.45
CALD1-203ENST00000393118 HOMER1Q86YM7 354 aa12.26□□□□□ -0.45
CALD1-203ENST00000393118 ADORA1P30542 326 aa12.26□□□□□ -0.45
CALD1-203ENST00000393118 TRIM22Q8IYM9 498 aa12.26□□□□□ -0.45
CALD1-203ENST00000393118 LEO1Q8WVC0 666 aaPredicted RBP12.26□□□□□ -0.45
CALD1-203ENST00000393118 HELLSQ9NRZ9 838 aa12.26□□□□□ -0.45
CALD1-203ENST00000393118 PES1O00541 588 aaKnown RBP12.26□□□□□ -0.45
CALD1-203ENST00000393118 ZFYP08048 801 aaPredicted RBP12.26□□□□□ -0.45
CALD1-203ENST00000393118 SLC5A1P13866 664 aa12.26□□□□□ -0.45
CALD1-203ENST00000393118 UBAC1Q9BSL1 405 aa12.26□□□□□ -0.45
CALD1-203ENST00000393118 CLIP2Q9UDT6 1046 aa12.26□□□□□ -0.45
CALD1-203ENST00000393118 REREQ9P2R6 1566 aa12.26□□□□□ -0.45
CALD1-203ENST00000393118 PI16Q6UXB8 463 aa12.25□□□□□ -0.45
CALD1-203ENST00000393118 IPO4Q8TEX9 1081 aaKnown RBP12.25□□□□□ -0.45
CALD1-203ENST00000393118 TULP1O00294 542 aaPredicted RBP12.25□□□□□ -0.45
CALD1-203ENST00000393118 CDKL5O76039 1030 aa12.25□□□□□ -0.45
CALD1-203ENST00000393118 METAP2P50579 478 aaKnown RBP eCLIP12.25□□□□□ -0.45
CALD1-203ENST00000393118 TCIRG1Q13488 830 aa12.25□□□□□ -0.45
CALD1-203ENST00000393118 TMEM67Q5HYA8 995 aa12.25□□□□□ -0.45
CALD1-203ENST00000393118 ERCC4Q92889 916 aaPredicted RBP12.25□□□□□ -0.45
CALD1-203ENST00000393118 GTF3C6Q969F1 213 aa12.25□□□□□ -0.45
CALD1-203ENST00000393118 TAF6LQ9Y6J9 622 aa12.25□□□□□ -0.45
CALD1-203ENST00000393118 GOLGA8AA7E2F4 631 aa12.25□□□□□ -0.45
CALD1-203ENST00000393118 ERVV-2B6SEH9 535 aa12.25□□□□□ -0.45
CALD1-203ENST00000393118 E7EWF7 191 aa12.25□□□□□ -0.45
CALD1-203ENST00000393118 U2AF2P26368 475 aaKnown RBP eCLIP12.25□□□□□ -0.458e-8■□□□□ 10.4
CALD1-203ENST00000393118 MARCKSP29966 332 aaPredicted RBP12.25□□□□□ -0.45
CALD1-203ENST00000393118 CCDC186Q7Z3E2 898 aa12.25□□□□□ -0.45
CALD1-203ENST00000393118 JMYQ8N9B5 988 aa12.25□□□□□ -0.45
CALD1-203ENST00000393118 KAZALD1Q96I82 304 aa12.25□□□□□ -0.45
CALD1-203ENST00000393118 HSPD1P10809 573 aaKnown RBP12.25□□□□□ -0.45
CALD1-203ENST00000393118 PDIA6Q15084 440 aa12.25□□□□□ -0.45
CALD1-203ENST00000393118 C16orf45Q96MC5 204 aaPredicted RBP12.25□□□□□ -0.45
CALD1-203ENST00000393118 SLC12A7Q9Y666 1083 aa12.25□□□□□ -0.45
CALD1-203ENST00000393118 RIMS1Q86UR5 1692 aaKnown RBP12.25□□□□□ -0.45
CALD1-203ENST00000393118 GPAA1O43292 621 aa12.24□□□□□ -0.45
CALD1-203ENST00000393118 ATP6V1AP38606 617 aa12.24□□□□□ -0.45
CALD1-203ENST00000393118 HS1BP3Q53T59 392 aa12.24□□□□□ -0.45
CALD1-203ENST00000393118 OLFM4Q6UX06 510 aa12.24□□□□□ -0.45
CALD1-203ENST00000393118 TIGD1Q96MW7 591 aa12.24□□□□□ -0.45
CALD1-203ENST00000393118 TRIM34Q9BYJ4 488 aa12.24□□□□□ -0.45
CALD1-203ENST00000393118 GNL3LQ9NVN8 582 aaKnown RBP12.24□□□□□ -0.45
CALD1-203ENST00000393118 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.24□□□□□ -0.45
CALD1-203ENST00000393118 ZBTB22O15209 634 aa12.24□□□□□ -0.45
CALD1-203ENST00000393118 NOLC1Q14978 699 aaKnown RBP eCLIP12.24□□□□□ -0.45
CALD1-203ENST00000393118 PDILTQ8N807 584 aa12.24□□□□□ -0.45
CALD1-203ENST00000393118 SLC4A8Q2Y0W8 1093 aa12.24□□□□□ -0.45
CALD1-203ENST00000393118 ANO10Q9NW15 660 aa12.24□□□□□ -0.45
CALD1-203ENST00000393118 NCAPD2Q15021 1401 aa12.24□□□□□ -0.45
CALD1-203ENST00000393118 NBPF26B4DH59 902 aa12.23□□□□□ -0.45
CALD1-203ENST00000393118 NBPF14Q5TI25 921 aa12.23□□□□□ -0.45
CALD1-203ENST00000393118 NBPF10Q6P3W6 841 aaKnown RBP12.23□□□□□ -0.45
CALD1-203ENST00000393118 SYNE4Q8N205 404 aa12.23□□□□□ -0.45
CALD1-203ENST00000393118 NBPF15Q8N660 670 aa12.23□□□□□ -0.45
CALD1-203ENST00000393118 MIGA1Q8NAN2 632 aa12.23□□□□□ -0.45
CALD1-203ENST00000393118 SERPINC1P01008 464 aa12.23□□□□□ -0.45
CALD1-203ENST00000393118 IARSP41252 1262 aaKnown RBP12.23□□□□□ -0.45
CALD1-203ENST00000393118 TTF1Q15361 905 aaPredicted RBP12.23□□□□□ -0.45
CALD1-203ENST00000393118 SLC26A6Q9BXS9 759 aa12.23□□□□□ -0.45
CALD1-203ENST00000393118 WDR17Q8IZU2 1322 aa12.23□□□□□ -0.45
CALD1-203ENST00000393118 A0A1B0GVL5 298 aa12.23□□□□□ -0.45
CALD1-203ENST00000393118 PTGS1P23219 599 aa12.23□□□□□ -0.45
CALD1-203ENST00000393118 NIP7Q9Y221 180 aaKnown RBP eCLIP12.23□□□□□ -0.45
CALD1-203ENST00000393118 PXDNQ92626 1479 aa12.23□□□□□ -0.45
CALD1-203ENST00000393118 SCRN1Q12765 414 aa12.23□□□□□ -0.45
CALD1-203ENST00000393118 BRINP3Q76B58 766 aa12.23□□□□□ -0.45
CALD1-203ENST00000393118 ALG1Q9BT22 464 aa12.23□□□□□ -0.45
CALD1-203ENST00000393118 HOOK1Q9UJC3 728 aaKnown RBP12.23□□□□□ -0.45
CALD1-203ENST00000393118 DLG5Q8TDM6 1919 aa12.22□□□□□ -0.45
CALD1-203ENST00000393118 HEG1Q9ULI3 1381 aa12.22□□□□□ -0.45
CALD1-203ENST00000393118 SPATA31A3Q5VYP0 1347 aa12.22□□□□□ -0.45
CALD1-203ENST00000393118 B4E1Z4 1266 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms