RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 CAPN2P17655 700 aa14.94□□□□□ -0.02
LCA5-202ENST00000392959 ASIC1P78348 528 aa14.94□□□□□ -0.02
LCA5-202ENST00000392959 SLC4A8Q2Y0W8 1093 aa14.94□□□□□ -0.02
LCA5-202ENST00000392959 TRMT1LQ7Z2T5 733 aaKnown RBP14.94□□□□□ -0.02
LCA5-202ENST00000392959 CCDC152Q4G0S7 254 aa14.93□□□□□ -0.02
LCA5-202ENST00000392959 PLVAPQ9BX97 442 aa14.93□□□□□ -0.02
LCA5-202ENST00000392959 GTPBP4Q9BZE4 634 aaKnown RBP14.93□□□□□ -0.02
LCA5-202ENST00000392959 DNAI2Q9GZS0 605 aa14.93□□□□□ -0.02
LCA5-202ENST00000392959 SF3B2Q13435 895 aaKnown RBP14.93□□□□□ -0.02
LCA5-202ENST00000392959 CCDC155Q8N6L0 562 aa14.93□□□□□ -0.02
LCA5-202ENST00000392959 PHF23Q9BUL5 403 aaPredicted RBP14.93□□□□□ -0.02
LCA5-202ENST00000392959 OPA1O60313 960 aa14.93□□□□□ -0.02
LCA5-202ENST00000392959 CHRNA2Q15822 529 aa14.93□□□□□ -0.02
LCA5-202ENST00000392959 ATRIPQ8WXE1 791 aa14.93□□□□□ -0.02
LCA5-202ENST00000392959 ZRANB1Q9UGI0 708 aa14.93□□□□□ -0.02
LCA5-202ENST00000392959 RNF113AO15541 343 aaKnown RBP14.92□□□□□ -0.02
LCA5-202ENST00000392959 CCDC42Q96M95 316 aa14.92□□□□□ -0.02
LCA5-202ENST00000392959 SCLT1Q96NL6 688 aa14.92□□□□□ -0.02
LCA5-202ENST00000392959 FEZ1Q99689 392 aa14.92□□□□□ -0.02
LCA5-202ENST00000392959 MMRN2Q9H8L6 949 aa14.92□□□□□ -0.02
LCA5-202ENST00000392959 KARSQ15046 597 aaKnown RBP14.92□□□□□ -0.02
LCA5-202ENST00000392959 CWF19L2Q2TBE0 894 aaKnown RBP14.92□□□□□ -0.02
LCA5-202ENST00000392959 ATL3Q6DD88 541 aa14.92□□□□□ -0.02
LCA5-202ENST00000392959 ERMNQ8TAM6 284 aa14.92□□□□□ -0.02
LCA5-202ENST00000392959 IQSEC3Q9UPP2 1182 aaPredicted RBP14.92□□□□□ -0.02
LCA5-202ENST00000392959 HSPA4P34932 840 aa14.92□□□□□ -0.02
LCA5-202ENST00000392959 STX17P56962 302 aa14.92□□□□□ -0.02
LCA5-202ENST00000392959 SELENOOQ9BVL4 669 aa14.92□□□□□ -0.02
LCA5-202ENST00000392959 LZTFL1Q9NQ48 299 aa14.92□□□□□ -0.02
LCA5-202ENST00000392959 DENND4BO75064 1496 aaPredicted RBP14.92□□□□□ -0.02
LCA5-202ENST00000392959 PPIP5K1Q6PFW1 1433 aa14.92□□□□□ -0.02
LCA5-202ENST00000392959 HLA-DOAP06340 250 aa14.92□□□□□ -0.02
LCA5-202ENST00000392959 TUBBP07437 444 aa14.92□□□□□ -0.02
LCA5-202ENST00000392959 CPA1P15085 419 aa14.91□□□□□ -0.02
LCA5-202ENST00000392959 RRAGDQ9NQL2 400 aaPredicted RBP14.91□□□□□ -0.02
LCA5-202ENST00000392959 ATP2C2O75185 946 aa14.91□□□□□ -0.02
LCA5-202ENST00000392959 TSPY3P0CV98 308 aa14.91□□□□□ -0.02
LCA5-202ENST00000392959 TSPY8P0CW00 308 aa14.91□□□□□ -0.02
LCA5-202ENST00000392959 UGGT2Q9NYU1 1516 aa14.91□□□□□ -0.02
LCA5-202ENST00000392959 GPATCH11Q8N954 259 aa14.91□□□□□ -0.02
LCA5-202ENST00000392959 SBNO2Q9Y2G9 1366 aa14.91□□□□□ -0.02
LCA5-202ENST00000392959 CALML3P27482 149 aa14.91□□□□□ -0.02
LCA5-202ENST00000392959 MYL5Q02045 173 aa14.91□□□□□ -0.02
LCA5-202ENST00000392959 HEATR3Q7Z4Q2 680 aa14.91□□□□□ -0.02
LCA5-202ENST00000392959 CABP5Q9NP86 173 aa14.91□□□□□ -0.02
LCA5-202ENST00000392959 KDM2BQ8NHM5 1336 aa14.9□□□□□ -0.02
LCA5-202ENST00000392959 FAM160A1Q05DH4 1040 aa14.9□□□□□ -0.02
LCA5-202ENST00000392959 CCDC174Q6PII3 467 aa14.9□□□□□ -0.02
LCA5-202ENST00000392959 GUCA1BQ9UMX6 200 aa14.9□□□□□ -0.02
LCA5-202ENST00000392959 ZNF569Q5MCW4 686 aa14.9□□□□□ -0.02
LCA5-202ENST00000392959 NAA16Q6N069 864 aaPredicted RBP14.9□□□□□ -0.02
LCA5-202ENST00000392959 TBC1D5Q92609 795 aa14.9□□□□□ -0.02
LCA5-202ENST00000392959 SAMM50Q9Y512 469 aa14.9□□□□□ -0.02
LCA5-202ENST00000392959 IGSF3O75054 1194 aa14.9□□□□□ -0.02
LCA5-202ENST00000392959 ADAMTS2O95450 1211 aa14.9□□□□□ -0.02
LCA5-202ENST00000392959 STAMBPO95630 424 aa14.9□□□□□ -0.02
LCA5-202ENST00000392959 NF2P35240 595 aa14.9□□□□□ -0.02
LCA5-202ENST00000392959 OTUD7AQ8TE49 926 aaPredicted RBP14.9□□□□□ -0.02
LCA5-202ENST00000392959 UTP14AQ9BVJ6 771 aaKnown RBP14.9□□□□□ -0.02
LCA5-202ENST00000392959 FLT4P35916 1363 aa14.9□□□□□ -0.02
LCA5-202ENST00000392959 A0A1B0GVL5 298 aa14.9□□□□□ -0.02
LCA5-202ENST00000392959 HOMER2Q9NSB8 354 aa14.9□□□□□ -0.02
LCA5-202ENST00000392959 OGFRQ9NZT2 677 aa14.9□□□□□ -0.02
LCA5-202ENST00000392959 PUF60Q9UHX1 559 aaKnown RBP14.9□□□□□ -0.02
LCA5-202ENST00000392959 ACTN2P35609 894 aa14.89□□□□□ -0.03
LCA5-202ENST00000392959 PHACTR2O75167 634 aa14.89□□□□□ -0.03
LCA5-202ENST00000392959 CALM1P0DP23 149 aa14.89□□□□□ -0.03
LCA5-202ENST00000392959 CALM2P0DP24 149 aa14.89□□□□□ -0.03
LCA5-202ENST00000392959 CALM3P0DP25 149 aa14.89□□□□□ -0.03
LCA5-202ENST00000392959 GSTO1P78417 241 aa14.89□□□□□ -0.03
LCA5-202ENST00000392959 LUC7L2Q9Y383 392 aaKnown RBP14.89□□□□□ -0.03
LCA5-202ENST00000392959 EBAG9O00559 213 aa14.89□□□□□ -0.03
LCA5-202ENST00000392959 ZNF445P59923 1031 aa14.89□□□□□ -0.03
LCA5-202ENST00000392959 LAMC3Q9Y6N6 1575 aa14.88□□□□□ -0.03
LCA5-202ENST00000392959 NAPAP54920 295 aa14.88□□□□□ -0.03
LCA5-202ENST00000392959 UBXN1Q04323 297 aa14.88□□□□□ -0.03
LCA5-202ENST00000392959 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.88□□□□□ -0.03
LCA5-202ENST00000392959 IQUBQ8NA54 791 aa14.88□□□□□ -0.03
LCA5-202ENST00000392959 ZCRB1Q8TBF4 217 aaKnown RBP14.88□□□□□ -0.03
LCA5-202ENST00000392959 FBF1Q8TES7 1133 aa14.88□□□□□ -0.03
LCA5-202ENST00000392959 ERO1AQ96HE7 468 aa14.88□□□□□ -0.03
LCA5-202ENST00000392959 RHOXF2BP0C7M4 288 aa14.88□□□□□ -0.03
LCA5-202ENST00000392959 TFCP2Q12800 502 aa14.88□□□□□ -0.03
LCA5-202ENST00000392959 CNGA4Q8IV77 575 aa14.88□□□□□ -0.03
LCA5-202ENST00000392959 RHOXF2Q9BQY4 288 aa14.88□□□□□ -0.03
LCA5-202ENST00000392959 VPS18Q9P253 973 aa14.88□□□□□ -0.03
LCA5-202ENST00000392959 GNAT2P19087 354 aa14.88□□□□□ -0.03
LCA5-202ENST00000392959 PRPHP41219 470 aa14.88□□□□□ -0.03
LCA5-202ENST00000392959 DDX12PQ92771 950 aa14.88□□□□□ -0.03
LCA5-202ENST00000392959 IKBKGQ9Y6K9 419 aa14.88□□□□□ -0.03
LCA5-202ENST00000392959 CAPZA3Q96KX2 299 aa14.87□□□□□ -0.03
LCA5-202ENST00000392959 BAG1Q99933 345 aaPredicted RBP14.87□□□□□ -0.03
LCA5-202ENST00000392959 BICDL2A1A5D9 508 aa14.87□□□□□ -0.03
LCA5-202ENST00000392959 EYA1Q99502 592 aa14.87□□□□□ -0.03
LCA5-202ENST00000392959 VAV2P52735 878 aa14.87□□□□□ -0.03
LCA5-202ENST00000392959 ARID5AQ03989 594 aa14.87□□□□□ -0.03
LCA5-202ENST00000392959 C6orf163Q5TEZ5 329 aa14.87□□□□□ -0.03
LCA5-202ENST00000392959 NSRP1Q9H0G5 558 aaKnown RBP14.87□□□□□ -0.03
LCA5-202ENST00000392959 MSH6P52701 1360 aa14.87□□□□□ -0.03
LCA5-202ENST00000392959 A0A1W2PRG0 241 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms