RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 PODXL2Q9NZ53 605 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 MTUS1Q9ULD2 1270 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 RTL9Q8NET4 1388 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 ESYT2A0FGR8 921 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 BICDL2A1A5D9 508 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 F8W8V4 182 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 LDHBP07195 334 aaKnown RBP4.51□□□□□ -1.69
UBR3-202ENST00000392632 NFKBIAP25963 317 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 POLR2BP30876 1174 aaKnown RBP4.51□□□□□ -1.69
UBR3-202ENST00000392632 YWHAEP62258 255 aaKnown RBP4.51□□□□□ -1.69
UBR3-202ENST00000392632 NIM1KQ8IY84 436 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 CCDC63Q8NA47 563 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 LIMCH1Q9UPQ0 1083 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 ATP6V0A2Q9Y487 856 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 TACC3Q9Y6A5 838 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 NAIPQ13075 1403 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 EPRSP07814 1512 aaKnown RBP4.51□□□□□ -1.69
UBR3-202ENST00000392632 N4BP3O15049 544 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 WDR46O15213 610 aaKnown RBP4.51□□□□□ -1.69
UBR3-202ENST00000392632 ZBTB43O43298 467 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 P4HA1P13674 534 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 CASQ1P31415 396 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 STRN3Q13033 797 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 TRPC3Q13507 836 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 CFAP157Q5JU67 520 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 PRPF40BQ6NWY9 871 aaKnown RBP4.51□□□□□ -1.69
UBR3-202ENST00000392632 TEKT1Q969V4 418 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 FAM212AQ96EL1 285 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 FAM193BQ96PV7 902 aaPredicted RBP4.51□□□□□ -1.69
UBR3-202ENST00000392632 ATAD2BQ9ULI0 1458 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 WASLO00401 505 aaPredicted RBP4.5□□□□□ -1.69
UBR3-202ENST00000392632 DAPK3O43293 454 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 IL2RBP14784 551 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 STAT6P42226 847 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 CCNA1P78396 465 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 CLUL1Q15846 466 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 GSTA5Q7RTV2 222 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 CNBD1Q8NA66 436 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 MIS12Q9H081 205 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 ZNF277Q9NRM2 450 aaPredicted RBP4.5□□□□□ -1.69
UBR3-202ENST00000392632 SWAP70Q9UH65 585 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 AFG3L2Q9Y4W6 797 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 RTN1Q16799 776 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 MCTP2Q6DN12 878 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 C10orf67Q8IYJ2 551 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 ANKRD24Q8TF21 1146 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 C1orf115Q9H7X2 142 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 RNF216Q9NWF9 866 aaPredicted RBP4.5□□□□□ -1.69
UBR3-202ENST00000392632 BCCIPQ9P287 314 aaKnown RBP eCLIP4.5□□□□□ -1.69
UBR3-202ENST00000392632 MTRF1LQ9UGC7 380 aaKnown RBP4.5□□□□□ -1.69
UBR3-202ENST00000392632 USH1CQ9Y6N9 552 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 CD109Q6YHK3 1445 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 PIK3R4Q99570 1358 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 RAD50Q92878 1312 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 TYW5A2RUC4 315 aaKnown RBP4.5□□□□□ -1.69
UBR3-202ENST00000392632 F8W031 263 aaPredicted RBP4.5□□□□□ -1.69
UBR3-202ENST00000392632 ALDH1L1O75891 902 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 TMPOP42166 694 aaKnown RBP4.5□□□□□ -1.69
UBR3-202ENST00000392632 TAOK1Q7L7X3 1001 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 UBE3BQ7Z3V4 1068 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 RSPH3Q86UC2 560 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 MROH2BQ7Z745 1585 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 POLA1P09884 1462 aaPredicted RBP4.5□□□□□ -1.69
UBR3-202ENST00000392632 LMTK3Q96Q04 1460 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 FGD6Q6ZV73 1430 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 ERBINQ96RT1 1412 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 TACC1O75410 805 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 ALDH1B1P30837 517 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 ATP6V1E1P36543 226 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 BIRC3Q13489 604 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 PICALMQ13492 652 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 GEN1Q17RS7 908 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 MICU3Q86XE3 530 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 RAB11FIP4Q86YS3 637 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 ARFGAP2Q8N6H7 521 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 GPR161Q8N6U8 529 aaKnown RBP4.5□□□□□ -1.69
UBR3-202ENST00000392632 TSR2Q969E8 191 aaKnown RBP4.5□□□□□ -1.69
UBR3-202ENST00000392632 GTF3C6Q969F1 213 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 TRIM7Q9C029 511 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 C19orf44Q9H6X5 657 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 RBM28Q9NW13 759 aaKnown RBP4.5□□□□□ -1.69
UBR3-202ENST00000392632 EXOC6BQ9Y2D4 811 aa4.5□□□□□ -1.69
UBR3-202ENST00000392632 CAMSAP2Q08AD1 1489 aa4.49□□□□□ -1.69
UBR3-202ENST00000392632 GOLGA6CA6NDK9 693 aa4.49□□□□□ -1.69
UBR3-202ENST00000392632 GOLGA6BA6NDN3 693 aa4.49□□□□□ -1.69
UBR3-202ENST00000392632 XPOTO43592 962 aaKnown RBP4.49□□□□□ -1.69
UBR3-202ENST00000392632 URI1O94763 535 aaPredicted RBP4.49□□□□□ -1.69
UBR3-202ENST00000392632 TUBB4AP04350 444 aa4.49□□□□□ -1.69
UBR3-202ENST00000392632 TUBBP07437 444 aa4.49□□□□□ -1.69
UBR3-202ENST00000392632 GOLGA6DP0CG33 693 aa4.49□□□□□ -1.69
UBR3-202ENST00000392632 ASIC1P78348 528 aa4.49□□□□□ -1.69
UBR3-202ENST00000392632 SATB1Q01826 763 aa4.49□□□□□ -1.69
UBR3-202ENST00000392632 GABPAQ06546 454 aa4.49□□□□□ -1.69
UBR3-202ENST00000392632 GNPTABQ3T906 1256 aa4.49□□□□□ -1.69
UBR3-202ENST00000392632 VWA3BQ502W6 1294 aa4.49□□□□□ -1.69
UBR3-202ENST00000392632 LIN9Q5TKA1 542 aa4.49□□□□□ -1.69
UBR3-202ENST00000392632 HAUS3Q68CZ6 603 aa4.49□□□□□ -1.69
UBR3-202ENST00000392632 DPH6Q7L8W6 267 aa4.49□□□□□ -1.69
UBR3-202ENST00000392632 HEATR3Q7Z4Q2 680 aa4.49□□□□□ -1.69
UBR3-202ENST00000392632 NUTM1Q86Y26 1132 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms