RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 HCLS1P14317 486 aaPredicted RBP23.98■■□□□ 1.43
PTPN11-202ENST00000392597 CPA1P15085 419 aa23.98■■□□□ 1.43
PTPN11-202ENST00000392597 TXNRD1Q16881 649 aa23.98■■□□□ 1.43
PTPN11-202ENST00000392597 SCN7AQ01118 1682 aa23.97■■□□□ 1.43
PTPN11-202ENST00000392597 FKBP4Q02790 459 aaKnown RBP eCLIP23.97■■□□□ 1.43
PTPN11-202ENST00000392597 CCDC129Q6ZRS4 1044 aa23.97■■□□□ 1.43
PTPN11-202ENST00000392597 UPF1Q92900 1129 aaKnown RBP eCLIP23.97■■□□□ 1.43
PTPN11-202ENST00000392597 TAF1LQ8IZX4 1826 aa23.97■■□□□ 1.43
PTPN11-202ENST00000392597 RPS6KB1P23443 525 aa23.96■■□□□ 1.43
PTPN11-202ENST00000392597 HMGB2P26583 209 aaKnown RBP23.96■■□□□ 1.43
PTPN11-202ENST00000392597 PUM3Q15397 648 aaKnown RBP23.96■■□□□ 1.43
PTPN11-202ENST00000392597 AKAP11Q9UKA4 1901 aa23.96■■□□□ 1.43
PTPN11-202ENST00000392597 CHGBP05060 677 aa23.96■■□□□ 1.43
PTPN11-202ENST00000392597 PROM2Q8N271 834 aa23.96■■□□□ 1.43
PTPN11-202ENST00000392597 CAMKK2Q96RR4 588 aa23.96■■□□□ 1.43
PTPN11-202ENST00000392597 MYH7P12883 1935 aa23.96■■□□□ 1.43
PTPN11-202ENST00000392597 EN1Q05925 392 aaPredicted RBP23.95■■□□□ 1.42
PTPN11-202ENST00000392597 LPIN2Q92539 896 aa23.95■■□□□ 1.42
PTPN11-202ENST00000392597 LRRC4BQ9NT99 713 aa23.95■■□□□ 1.42
PTPN11-202ENST00000392597 FGFR2P21802 821 aa23.94■■□□□ 1.42
PTPN11-202ENST00000392597 MAST3O60307 1309 aa23.94■■□□□ 1.42
PTPN11-202ENST00000392597 SCARF1Q14162 830 aa23.94■■□□□ 1.42
PTPN11-202ENST00000392597 WDR33Q9C0J8 1336 aaKnown RBP23.94■■□□□ 1.42
PTPN11-202ENST00000392597 UQCRFS1P1P0C7P4 283 aa23.93■■□□□ 1.42
PTPN11-202ENST00000392597 ARID4AP29374 1257 aaPredicted RBP23.93■■□□□ 1.42
PTPN11-202ENST00000392597 ZAP70P43403 619 aa23.93■■□□□ 1.42
PTPN11-202ENST00000392597 KCNQ4P56696 695 aa23.93■■□□□ 1.42
PTPN11-202ENST00000392597 TTF1Q15361 905 aaPredicted RBP23.93■■□□□ 1.42
PTPN11-202ENST00000392597 MPHOSPH8Q99549 860 aa23.93■■□□□ 1.42
PTPN11-202ENST00000392597 FAM177BA6PVY3 158 aa23.92■■□□□ 1.42
PTPN11-202ENST00000392597 RPS6KA4O75676 772 aa23.92■■□□□ 1.42
PTPN11-202ENST00000392597 DEFB132Q7Z7B7 95 aa23.92■■□□□ 1.42
PTPN11-202ENST00000392597 TAF6LQ9Y6J9 622 aa23.92■■□□□ 1.42
PTPN11-202ENST00000392597 CYP21A2P08686 494 aa23.92■■□□□ 1.42
PTPN11-202ENST00000392597 MCAMP43121 646 aa23.92■■□□□ 1.42
PTPN11-202ENST00000392597 EZH2Q15910 746 aaKnown RBP23.92■■□□□ 1.42
PTPN11-202ENST00000392597 MCTP1Q6DN14 999 aa23.92■■□□□ 1.42
PTPN11-202ENST00000392597 NEK1Q96PY6 1258 aa23.92■■□□□ 1.42
PTPN11-202ENST00000392597 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.92■■□□□ 1.42
PTPN11-202ENST00000392597 HMGB1P09429 215 aaKnown RBP23.91■■□□□ 1.42
PTPN11-202ENST00000392597 HSPD1P10809 573 aaKnown RBP23.91■■□□□ 1.42
PTPN11-202ENST00000392597 IGHMBP2P38935 993 aaKnown RBP23.91■■□□□ 1.42
PTPN11-202ENST00000392597 ZSCAN25Q6NSZ9 544 aa23.91■■□□□ 1.42
PTPN11-202ENST00000392597 SMC3Q9UQE7 1217 aa23.91■■□□□ 1.42
PTPN11-202ENST00000392597 LARGE1O95461 756 aa23.9■■□□□ 1.42
PTPN11-202ENST00000392597 SLC5A1P13866 664 aa23.9■■□□□ 1.42
PTPN11-202ENST00000392597 APPBP2Q92624 585 aa23.9■■□□□ 1.42
PTPN11-202ENST00000392597 OSBP2Q969R2 916 aa23.9■■□□□ 1.42
PTPN11-202ENST00000392597 C4BP0C0L5 1744 aa23.9■■□□□ 1.42
PTPN11-202ENST00000392597 ME3Q16798 604 aa23.9■■□□□ 1.42
PTPN11-202ENST00000392597 KLHL40Q2TBA0 621 aa23.9■■□□□ 1.42
PTPN11-202ENST00000392597 CCDC102BQ68D86 513 aa23.9■■□□□ 1.42
PTPN11-202ENST00000392597 SEC31BQ9NQW1 1179 aa23.9■■□□□ 1.42
PTPN11-202ENST00000392597 NARFQ9UHQ1 456 aa23.9■■□□□ 1.42
PTPN11-202ENST00000392597 M0R2C6 588 aa23.89■■□□□ 1.41
PTPN11-202ENST00000392597 PDIA4P13667 645 aaKnown RBP23.89■■□□□ 1.41
PTPN11-202ENST00000392597 CDC5LQ99459 802 aaKnown RBP23.89■■□□□ 1.41
PTPN11-202ENST00000392597 LARP6Q9BRS8 491 aaKnown RBP23.89■■□□□ 1.41
PTPN11-202ENST00000392597 TPCN1Q9ULQ1 816 aa23.89■■□□□ 1.41
PTPN11-202ENST00000392597 SLFNL1Q499Z3 407 aa23.88■■□□□ 1.41
PTPN11-202ENST00000392597 CCDC83Q8IWF9 413 aa23.88■■□□□ 1.41
PTPN11-202ENST00000392597 LMBRD1Q9NUN5 540 aa23.88■■□□□ 1.41
PTPN11-202ENST00000392597 TOB2Q14106 344 aaPredicted RBP23.87■■□□□ 1.41
PTPN11-202ENST00000392597 SF3B3Q15393 1217 aaKnown RBP23.87■■□□□ 1.41
PTPN11-202ENST00000392597 ISY1Q9ULR0 285 aaKnown RBP23.87■■□□□ 1.41
PTPN11-202ENST00000392597 COL24A1Q17RW2 1714 aa23.87■■□□□ 1.41
PTPN11-202ENST00000392597 PHKA1P46020 1223 aa23.87■■□□□ 1.41
PTPN11-202ENST00000392597 SLC10A5Q5PT55 438 aa23.87■■□□□ 1.41
PTPN11-202ENST00000392597 L1TD1Q5T7N2 865 aaKnown RBP23.87■■□□□ 1.41
PTPN11-202ENST00000392597 GZF1Q9H116 711 aaPredicted RBP23.87■■□□□ 1.41
PTPN11-202ENST00000392597 CTNNA3Q9UI47 895 aa23.87■■□□□ 1.41
PTPN11-202ENST00000392597 WASHC4Q2M389 1173 aa23.86■■□□□ 1.41
PTPN11-202ENST00000392597 PI16Q6UXB8 463 aa23.86■■□□□ 1.41
PTPN11-202ENST00000392597 BCL2L12Q9HB09 334 aa23.86■■□□□ 1.41
PTPN11-202ENST00000392597 COL9A3Q14050 684 aaPredicted RBP23.85■■□□□ 1.41
PTPN11-202ENST00000392597 NYXQ9GZU5 481 aa23.85■■□□□ 1.41
PTPN11-202ENST00000392597 DDX49Q9Y6V7 483 aaKnown RBP23.85■■□□□ 1.41
PTPN11-202ENST00000392597 LAMA4Q16363 1823 aa23.85■■□□□ 1.41
PTPN11-202ENST00000392597 FSD2A1L4K1 749 aa23.85■■□□□ 1.41
PTPN11-202ENST00000392597 ADD2P35612 726 aa23.85■■□□□ 1.41
PTPN11-202ENST00000392597 ST3GAL1Q11201 340 aa23.85■■□□□ 1.41
PTPN11-202ENST00000392597 ERFEQ4G0M1 354 aa23.85■■□□□ 1.41
PTPN11-202ENST00000392597 HELBQ8NG08 1087 aaPredicted RBP23.85■■□□□ 1.41
PTPN11-202ENST00000392597 STX6O43752 255 aa23.84■■□□□ 1.41
PTPN11-202ENST00000392597 UBE3CQ15386 1083 aa23.84■■□□□ 1.41
PTPN11-202ENST00000392597 RTCBQ9Y3I0 505 aaKnown RBP23.84■■□□□ 1.41
PTPN11-202ENST00000392597 CASZ1Q86V15 1759 aa23.84■■□□□ 1.41
PTPN11-202ENST00000392597 GNPATO15228 680 aa23.83■■□□□ 1.41
PTPN11-202ENST00000392597 ZSCAN22P10073 491 aaPredicted RBP23.83■■□□□ 1.41
PTPN11-202ENST00000392597 SYT1P21579 422 aa23.83■■□□□ 1.41
PTPN11-202ENST00000392597 GJB2P29033 226 aa23.83■■□□□ 1.41
PTPN11-202ENST00000392597 TBC1D9BQ66K14 1250 aa23.83■■□□□ 1.41
PTPN11-202ENST00000392597 STOX1Q6ZVD7 989 aa23.83■■□□□ 1.4
PTPN11-202ENST00000392597 DHX32Q7L7V1 743 aaKnown RBP23.83■■□□□ 1.4
PTPN11-202ENST00000392597 DOCK2Q92608 1830 aa23.82■■□□□ 1.4
PTPN11-202ENST00000392597 GOLGA6L3A6NEY3 463 aa23.82■■□□□ 1.4
PTPN11-202ENST00000392597 ZPR1O75312 459 aa23.82■■□□□ 1.4
PTPN11-202ENST00000392597 FOXD4L5Q5VV16 416 aaPredicted RBP23.82■■□□□ 1.4
PTPN11-202ENST00000392597 FOXD4L4Q8WXT5 416 aaPredicted RBP23.82■■□□□ 1.4
PTPN11-202ENST00000392597 TCEANC2Q96MN5 208 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms