RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 KRT28Q7Z3Y7 464 aa16.96■□□□□ 0.31
LRRFIP1-204ENST00000392000 ANO10Q9NW15 660 aa16.96■□□□□ 0.31
LRRFIP1-204ENST00000392000 A0A0G2JS52 829 aa16.96■□□□□ 0.31
LRRFIP1-204ENST00000392000 SERPINC1P01008 464 aa16.96■□□□□ 0.31
LRRFIP1-204ENST00000392000 RESTQ13127 1097 aa16.96■□□□□ 0.31
LRRFIP1-204ENST00000392000 ARHGAP29Q52LW3 1261 aa16.96■□□□□ 0.31
LRRFIP1-204ENST00000392000 ARHGEF25Q86VW2 580 aa16.96■□□□□ 0.31
LRRFIP1-204ENST00000392000 DIP2AQ14689 1571 aa16.96■□□□□ 0.31
LRRFIP1-204ENST00000392000 KIF20AO95235 890 aa16.95■□□□□ 0.3
LRRFIP1-204ENST00000392000 CFAP100Q494V2 611 aa16.95■□□□□ 0.3
LRRFIP1-204ENST00000392000 SPECC1Q5M775 1068 aa16.95■□□□□ 0.3
LRRFIP1-204ENST00000392000 SYNE3Q6ZMZ3 975 aa16.95■□□□□ 0.3
LRRFIP1-204ENST00000392000 FEZ1Q99689 392 aa16.95■□□□□ 0.3
LRRFIP1-204ENST00000392000 HOXB7P09629 217 aa16.95■□□□□ 0.3
LRRFIP1-204ENST00000392000 LRRC24Q50LG9 513 aa16.95■□□□□ 0.3
LRRFIP1-204ENST00000392000 CCDC34Q96HJ3 373 aa16.95■□□□□ 0.3
LRRFIP1-204ENST00000392000 APPP05067 770 aa16.94■□□□□ 0.3
LRRFIP1-204ENST00000392000 PUS3Q9BZE2 481 aaKnown RBP16.94■□□□□ 0.3
LRRFIP1-204ENST00000392000 NRDCO43847 1150 aa16.94■□□□□ 0.3
LRRFIP1-204ENST00000392000 SLU7O95391 586 aaKnown RBP16.94■□□□□ 0.3
LRRFIP1-204ENST00000392000 ATP1A3P13637 1013 aa16.94■□□□□ 0.3
LRRFIP1-204ENST00000392000 NDUFA8P51970 172 aa16.94■□□□□ 0.3
LRRFIP1-204ENST00000392000 TTLL7Q6ZT98 887 aa16.94■□□□□ 0.3
LRRFIP1-204ENST00000392000 HDAC5Q9UQL6 1122 aa16.94■□□□□ 0.3
LRRFIP1-204ENST00000392000 SEC31AO94979 1220 aaKnown RBP16.94■□□□□ 0.3
LRRFIP1-204ENST00000392000 A1BGP04217 495 aa16.94■□□□□ 0.3
LRRFIP1-204ENST00000392000 MCMDC2Q4G0Z9 681 aa16.94■□□□□ 0.3
LRRFIP1-204ENST00000392000 PI16Q6UXB8 463 aa16.94■□□□□ 0.3
LRRFIP1-204ENST00000392000 DDX41Q9UJV9 622 aaKnown RBP16.94■□□□□ 0.3
LRRFIP1-204ENST00000392000 RGPD1P0DJD0 1748 aa16.94■□□□□ 0.3
LRRFIP1-204ENST00000392000 XRN1Q8IZH2 1706 aaKnown RBP16.93■□□□□ 0.3
LRRFIP1-204ENST00000392000 IQCB1Q15051 598 aa16.93■□□□□ 0.3
LRRFIP1-204ENST00000392000 ANKLE2Q86XL3 938 aa16.93■□□□□ 0.3
LRRFIP1-204ENST00000392000 ZNF397Q8NF99 534 aaPredicted RBP16.93■□□□□ 0.3
LRRFIP1-204ENST00000392000 METTL22Q9BUU2 404 aaPredicted RBP16.93■□□□□ 0.3
LRRFIP1-204ENST00000392000 PIK3C2AO00443 1686 aa16.93■□□□□ 0.3
LRRFIP1-204ENST00000392000 USP42Q9H9J4 1324 aaKnown RBP16.93■□□□□ 0.3
LRRFIP1-204ENST00000392000 PLCD3Q8N3E9 789 aa16.93■□□□□ 0.3
LRRFIP1-204ENST00000392000 TOMM22Q9NS69 142 aa16.93■□□□□ 0.3
LRRFIP1-204ENST00000392000 CLIC4Q9Y696 253 aa16.93■□□□□ 0.3
LRRFIP1-204ENST00000392000 PROSER2Q86WR7 435 aaPredicted RBP16.92■□□□□ 0.3
LRRFIP1-204ENST00000392000 UBXN4Q92575 508 aa16.92■□□□□ 0.3
LRRFIP1-204ENST00000392000 UTP14AQ9BVJ6 771 aaKnown RBP16.92■□□□□ 0.3
LRRFIP1-204ENST00000392000 CHMP4AQ9BY43 222 aa16.92■□□□□ 0.3
LRRFIP1-204ENST00000392000 PCDHA7Q9UN72 937 aa16.92■□□□□ 0.3
LRRFIP1-204ENST00000392000 TEX35Q5T0J7 233 aa16.92■□□□□ 0.3
LRRFIP1-204ENST00000392000 ZNF396Q96N95 335 aaPredicted RBP16.92■□□□□ 0.3
LRRFIP1-204ENST00000392000 NAT10Q9H0A0 1025 aaKnown RBP16.92■□□□□ 0.3
LRRFIP1-204ENST00000392000 ZCCHC17Q9NP64 241 aaKnown RBP16.92■□□□□ 0.3
LRRFIP1-204ENST00000392000 ELP1O95163 1332 aa16.92■□□□□ 0.3
LRRFIP1-204ENST00000392000 SLC3A2P08195 630 aaKnown RBP16.92■□□□□ 0.3
LRRFIP1-204ENST00000392000 TATP17735 454 aaPredicted RBP16.92■□□□□ 0.3
LRRFIP1-204ENST00000392000 CABP4P57796 275 aa16.92■□□□□ 0.3
LRRFIP1-204ENST00000392000 IL17RAQ96F46 866 aa16.92■□□□□ 0.3
LRRFIP1-204ENST00000392000 AIFM3Q96NN9 605 aa16.92■□□□□ 0.3
LRRFIP1-204ENST00000392000 NWD1Q149M9 1564 aa16.91■□□□□ 0.3
LRRFIP1-204ENST00000392000 KRT32Q14532 448 aa16.91■□□□□ 0.3
LRRFIP1-204ENST00000392000 NSUN7Q8NE18 718 aaKnown RBP16.91■□□□□ 0.3
LRRFIP1-204ENST00000392000 CHMP4CQ96CF2 233 aa16.91■□□□□ 0.3
LRRFIP1-204ENST00000392000 EPB41L2O43491 1005 aaKnown RBP16.91■□□□□ 0.3
LRRFIP1-204ENST00000392000 GYS2P54840 703 aa16.91■□□□□ 0.3
LRRFIP1-204ENST00000392000 C8orf76Q96K31 380 aa16.91■□□□□ 0.3
LRRFIP1-204ENST00000392000 SLC52A2Q9HAB3 445 aa16.91■□□□□ 0.3
LRRFIP1-204ENST00000392000 FAM160A1Q05DH4 1040 aa16.9■□□□□ 0.3
LRRFIP1-204ENST00000392000 CPLX3Q8WVH0 158 aa16.9■□□□□ 0.3
LRRFIP1-204ENST00000392000 MRPS27Q92552 414 aaKnown RBP16.9■□□□□ 0.3
LRRFIP1-204ENST00000392000 ORC3Q9UBD5 711 aaPredicted RBP16.9■□□□□ 0.3
LRRFIP1-204ENST00000392000 NPHP4O75161 1426 aaPredicted RBP16.9■□□□□ 0.3
LRRFIP1-204ENST00000392000 IFIT1P09914 478 aaKnown RBP16.9■□□□□ 0.3
LRRFIP1-204ENST00000392000 NEK11Q8NG66 645 aa16.9■□□□□ 0.3
LRRFIP1-204ENST00000392000 NOL10Q9BSC4 688 aaKnown RBP16.9■□□□□ 0.3
LRRFIP1-204ENST00000392000 ZSCAN16Q9H4T2 348 aaPredicted RBP16.9■□□□□ 0.3
LRRFIP1-204ENST00000392000 DENND2AQ9ULE3 1009 aa16.9■□□□□ 0.3
LRRFIP1-204ENST00000392000 ZNF609O15014 1411 aa16.9■□□□□ 0.3
LRRFIP1-204ENST00000392000 KAT6BQ8WYB5 2073 aa16.9■□□□□ 0.3
LRRFIP1-204ENST00000392000 GOLGA8BA8MQT2 603 aa16.89■□□□□ 0.3
LRRFIP1-204ENST00000392000 CCZ1BP86790 482 aa16.89■□□□□ 0.3
LRRFIP1-204ENST00000392000 CCZ1P86791 482 aaPredicted RBP16.89■□□□□ 0.3
LRRFIP1-204ENST00000392000 DHX32Q7L7V1 743 aaKnown RBP16.89■□□□□ 0.3
LRRFIP1-204ENST00000392000 DHX40Q8IX18 779 aaKnown RBP16.89■□□□□ 0.3
LRRFIP1-204ENST00000392000 CARD6Q9BX69 1037 aa16.89■□□□□ 0.3
LRRFIP1-204ENST00000392000 PAG1Q9NWQ8 432 aa16.89■□□□□ 0.3
LRRFIP1-204ENST00000392000 CTDNEP1O95476 244 aa16.89■□□□□ 0.29
LRRFIP1-204ENST00000392000 ATP5JP18859 108 aa16.89■□□□□ 0.29
LRRFIP1-204ENST00000392000 U3KPZ7 1027 aaPredicted RBP16.89■□□□□ 0.29
LRRFIP1-204ENST00000392000 FAM208AQ9UK61 1670 aaKnown RBP16.89■□□□□ 0.29
LRRFIP1-204ENST00000392000 KLF18A0A0U1RQI7 1052 aa16.89■□□□□ 0.29
LRRFIP1-204ENST00000392000 HMG20BQ9P0W2 317 aa16.89■□□□□ 0.29
LRRFIP1-204ENST00000392000 UBR1Q8IWV7 1749 aa16.88■□□□□ 0.29
LRRFIP1-204ENST00000392000 SLFN14P0C7P3 912 aa16.88■□□□□ 0.29
LRRFIP1-204ENST00000392000 TPM4P67936 248 aa16.88■□□□□ 0.29
LRRFIP1-204ENST00000392000 RBM6P78332 1123 aaKnown RBP16.88■□□□□ 0.29
LRRFIP1-204ENST00000392000 TERF2Q15554 542 aa16.88■□□□□ 0.29
LRRFIP1-204ENST00000392000 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.88■□□□□ 0.29
LRRFIP1-204ENST00000392000 SYNE4Q8N205 404 aa16.88■□□□□ 0.29
LRRFIP1-204ENST00000392000 KCNB2Q92953 911 aa16.88■□□□□ 0.29
LRRFIP1-204ENST00000392000 SNRPA1P09661 255 aaKnown RBP16.88■□□□□ 0.29
LRRFIP1-204ENST00000392000 ADORA1P30542 326 aa16.88■□□□□ 0.29
LRRFIP1-204ENST00000392000 KARSQ15046 597 aaKnown RBP16.88■□□□□ 0.29
LRRFIP1-204ENST00000392000 MYL10Q9BUA6 226 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms