RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 GNAI3P08754 354 aa15.87■□□□□ 0.13
GGPS1-203ENST00000391855 VIL1P09327 827 aaKnown RBP15.87■□□□□ 0.13
GGPS1-203ENST00000391855 ZNF594Q96JF6 807 aaPredicted RBP15.87■□□□□ 0.13
GGPS1-203ENST00000391855 MROH5Q6ZUA9 1318 aa15.87■□□□□ 0.13
GGPS1-203ENST00000391855 AGBL3Q8NEM8 1001 aa15.86■□□□□ 0.13
GGPS1-203ENST00000391855 SCN9AQ15858 1988 aa15.86■□□□□ 0.13
GGPS1-203ENST00000391855 MYO3BQ8WXR4 1341 aa15.86■□□□□ 0.13
GGPS1-203ENST00000391855 USP17L3A6NCW0 530 aa15.85■□□□□ 0.13
GGPS1-203ENST00000391855 USP17L4A6NCW7 530 aa15.85■□□□□ 0.13
GGPS1-203ENST00000391855 RSBN1LQ6PCB5 846 aaPredicted RBP15.85■□□□□ 0.13
GGPS1-203ENST00000391855 USP17L1Q7RTZ2 530 aa15.85■□□□□ 0.13
GGPS1-203ENST00000391855 MICALL2Q8IY33 904 aa15.85■□□□□ 0.13
GGPS1-203ENST00000391855 CNOT7Q9UIV1 285 aaKnown RBP15.85■□□□□ 0.13
GGPS1-203ENST00000391855 FBXO3Q9UK99 471 aa15.85■□□□□ 0.13
GGPS1-203ENST00000391855 TAF5LO75529 589 aa15.85■□□□□ 0.13
GGPS1-203ENST00000391855 UBE4AQ14139 1066 aa15.85■□□□□ 0.13
GGPS1-203ENST00000391855 ZC3H15Q8WU90 426 aaKnown RBP15.85■□□□□ 0.13
GGPS1-203ENST00000391855 MEIS3Q99687 375 aa15.85■□□□□ 0.13
GGPS1-203ENST00000391855 ZBTB12Q9Y330 459 aaPredicted RBP15.85■□□□□ 0.13
GGPS1-203ENST00000391855 MMP14P50281 582 aa15.84■□□□□ 0.13
GGPS1-203ENST00000391855 STRIP1Q5VSL9 837 aa15.84■□□□□ 0.13
GGPS1-203ENST00000391855 ZNF804AQ7Z570 1209 aa15.84■□□□□ 0.13
GGPS1-203ENST00000391855 HELBQ8NG08 1087 aaPredicted RBP15.84■□□□□ 0.13
GGPS1-203ENST00000391855 RIPOR2Q9Y4F9 1068 aa15.84■□□□□ 0.13
GGPS1-203ENST00000391855 PASKQ96RG2 1323 aa15.83■□□□□ 0.13
GGPS1-203ENST00000391855 IRS2Q9Y4H2 1338 aa15.83■□□□□ 0.13
GGPS1-203ENST00000391855 METTL24Q5JXM2 366 aa15.83■□□□□ 0.12
GGPS1-203ENST00000391855 TXNRD3Q86VQ6 643 aa15.83■□□□□ 0.12
GGPS1-203ENST00000391855 FTSJ3Q8IY81 847 aaKnown RBP15.83■□□□□ 0.12
GGPS1-203ENST00000391855 CNTROBQ8N137 903 aa15.83■□□□□ 0.12
GGPS1-203ENST00000391855 KCNQ5Q9NR82 932 aa15.83■□□□□ 0.12
GGPS1-203ENST00000391855 LRRFIP2Q9Y608 721 aaKnown RBP15.83■□□□□ 0.12
GGPS1-203ENST00000391855 WTIPA6NIX2 430 aaPredicted RBP15.82■□□□□ 0.12
GGPS1-203ENST00000391855 PLIN1O60240 522 aa15.82■□□□□ 0.12
GGPS1-203ENST00000391855 ITGBL1O95965 494 aaPredicted RBP15.82■□□□□ 0.12
GGPS1-203ENST00000391855 KLRK1P26718 216 aa15.82■□□□□ 0.12
GGPS1-203ENST00000391855 RFX5P48382 616 aaPredicted RBP15.82■□□□□ 0.12
GGPS1-203ENST00000391855 DACT2Q5SW24 774 aa15.82■□□□□ 0.12
GGPS1-203ENST00000391855 MAP1SQ66K74 1059 aaPredicted RBP15.82■□□□□ 0.12
GGPS1-203ENST00000391855 PUS3Q9BZE2 481 aaKnown RBP15.82■□□□□ 0.12
GGPS1-203ENST00000391855 CD209Q9NNX6 404 aa15.82■□□□□ 0.12
GGPS1-203ENST00000391855 PGAP2Q9UHJ9 254 aa15.82■□□□□ 0.12
GGPS1-203ENST00000391855 EYA2O00167 538 aa15.81■□□□□ 0.12
GGPS1-203ENST00000391855 MS4A1P11836 297 aa15.81■□□□□ 0.12
GGPS1-203ENST00000391855 ZNF280AP59817 542 aaPredicted RBP15.81■□□□□ 0.12
GGPS1-203ENST00000391855 MTX1Q13505 466 aa15.81■□□□□ 0.12
GGPS1-203ENST00000391855 TRPM4Q8TD43 1214 aa15.81■□□□□ 0.12
GGPS1-203ENST00000391855 CLUAP1Q96AJ1 413 aa15.81■□□□□ 0.12
GGPS1-203ENST00000391855 GMLQ99445 158 aa15.81■□□□□ 0.12
GGPS1-203ENST00000391855 CREBZFQ9NS37 354 aa15.81■□□□□ 0.12
GGPS1-203ENST00000391855 ZNF646O15015 1829 aaPredicted RBP15.8■□□□□ 0.12
GGPS1-203ENST00000391855 CIAO1O76071 339 aa15.8■□□□□ 0.12
GGPS1-203ENST00000391855 PDE8BO95263 885 aa15.8■□□□□ 0.12
GGPS1-203ENST00000391855 GNAI2P04899 355 aa15.8■□□□□ 0.12
GGPS1-203ENST00000391855 USP17L8P0C7I0 530 aa15.8■□□□□ 0.12
GGPS1-203ENST00000391855 IL1R1P14778 569 aa15.8■□□□□ 0.12
GGPS1-203ENST00000391855 PTPN12Q05209 780 aaKnown RBP15.8■□□□□ 0.12
GGPS1-203ENST00000391855 LRRC24Q50LG9 513 aa15.8■□□□□ 0.12
GGPS1-203ENST00000391855 DZIP1LQ8IYY4 767 aaKnown RBP15.8■□□□□ 0.12
GGPS1-203ENST00000391855 TMEM57Q8N5G2 664 aa15.8■□□□□ 0.12
GGPS1-203ENST00000391855 SNAP23O00161 211 aa15.79■□□□□ 0.12
GGPS1-203ENST00000391855 FKBP1AP62942 108 aaKnown RBP15.79■□□□□ 0.12
GGPS1-203ENST00000391855 KIF4BQ2VIQ3 1234 aa15.79■□□□□ 0.12
GGPS1-203ENST00000391855 TTLL5Q6EMB2 1281 aa15.79■□□□□ 0.12
GGPS1-203ENST00000391855 VGLL2Q8N8G2 317 aa15.79■□□□□ 0.12
GGPS1-203ENST00000391855 FBXW7Q969H0 707 aa15.79■□□□□ 0.12
GGPS1-203ENST00000391855 COPRSQ9NQ92 184 aa15.79■□□□□ 0.12
GGPS1-203ENST00000391855 TNNQ9UQP3 1299 aa15.79■□□□□ 0.12
GGPS1-203ENST00000391855 CAPN15O75808 1086 aa15.78■□□□□ 0.12
GGPS1-203ENST00000391855 HIRAP54198 1017 aaPredicted RBP15.78■□□□□ 0.12
GGPS1-203ENST00000391855 GTF2IP78347 998 aa15.78■□□□□ 0.12
GGPS1-203ENST00000391855 PUM3Q15397 648 aaKnown RBP15.78■□□□□ 0.12
GGPS1-203ENST00000391855 TBC1D10BQ4KMP7 808 aaPredicted RBP15.78■□□□□ 0.12
GGPS1-203ENST00000391855 CDC37L1Q7L3B6 337 aa15.78■□□□□ 0.12
GGPS1-203ENST00000391855 SAMD7Q7Z3H4 446 aa15.78■□□□□ 0.12
GGPS1-203ENST00000391855 OGFOD1Q8N543 542 aa15.78■□□□□ 0.12
GGPS1-203ENST00000391855 KLHDC4Q8TBB5 520 aa15.78■□□□□ 0.12
GGPS1-203ENST00000391855 SHTN1A0MZ66 631 aa15.77■□□□□ 0.12
GGPS1-203ENST00000391855 TMEM88BA6NKF7 163 aa15.77■□□□□ 0.12
GGPS1-203ENST00000391855 IFIT1P09914 478 aaKnown RBP15.77■□□□□ 0.12
GGPS1-203ENST00000391855 HIBADHP31937 336 aaKnown RBP15.77■□□□□ 0.12
GGPS1-203ENST00000391855 IL15P40933 162 aaPredicted RBP15.77■□□□□ 0.12
GGPS1-203ENST00000391855 KLRG1Q96E93 195 aa15.77■□□□□ 0.12
GGPS1-203ENST00000391855 HDAC9Q9UKV0 1011 aa15.77■□□□□ 0.12
GGPS1-203ENST00000391855 SRGAP3O43295 1099 aa15.77■□□□□ 0.11
GGPS1-203ENST00000391855 CAVIN4Q5BKX8 364 aa15.77■□□□□ 0.11
GGPS1-203ENST00000391855 MYOZ2Q9NPC6 264 aa15.77■□□□□ 0.11
GGPS1-203ENST00000391855 FAM205AQ6ZU69 1335 aa15.76■□□□□ 0.11
GGPS1-203ENST00000391855 SASH1O94885 1247 aa15.76■□□□□ 0.11
GGPS1-203ENST00000391855 SLC5A1P13866 664 aa15.76■□□□□ 0.11
GGPS1-203ENST00000391855 RBM26Q5T8P6 1007 aaKnown RBP15.76■□□□□ 0.11
GGPS1-203ENST00000391855 ATG9AQ7Z3C6 839 aa15.76■□□□□ 0.11
GGPS1-203ENST00000391855 VPS37DQ86XT2 251 aa15.76■□□□□ 0.11
GGPS1-203ENST00000391855 ITPRIPQ8IWB1 547 aa15.76■□□□□ 0.11
GGPS1-203ENST00000391855 DNAJC5GQ8N7S2 189 aa15.76■□□□□ 0.11
GGPS1-203ENST00000391855 TDRD7Q8NHU6 1098 aaKnown RBP15.76■□□□□ 0.11
GGPS1-203ENST00000391855 LPIN2Q92539 896 aa15.76■□□□□ 0.11
GGPS1-203ENST00000391855 DCPSQ96C86 337 aaKnown RBP15.76■□□□□ 0.11
GGPS1-203ENST00000391855 FAM84BQ96KN1 310 aaPredicted RBP15.76■□□□□ 0.11
GGPS1-203ENST00000391855 CEP126Q9P2H0 1117 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms