RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 TSC22D4Q9Y3Q8 395 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 GJA3Q9Y6H8 435 aa0.13□□□□□ -2.39
TRAJ28-201ENST00000390509 PCSK5Q92824 1860 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 LOC100289279A0A1B0GTE1 492 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 A0A1W2PNR3 127 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 SPDYE5A6NIY4 337 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 ERVH48-1M5A8F1 160 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 MASP2O00187 686 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 KRT86O43790 486 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 ZNF202O95125 648 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 F12P00748 615 aaPredicted RBP0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 RAC2P15153 192 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 TATP17735 454 aaPredicted RBP0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 PI3P19957 117 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 ATP4AP20648 1035 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 ZFP36P26651 326 aaKnown RBP0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 RXRBP28702 533 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 LTKP29376 864 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 SSTR3P32745 418 aaPredicted RBP0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 ZNF76P36508 570 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 PREPP48147 710 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 C21orf58P58505 322 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 RAB15P59190 212 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 PRKCQQ04759 706 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 SPEM2Q0P670 501 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 SCRN1Q12765 414 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 BNIP3Q12983 259 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 PTGDRQ13258 359 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 KRT81Q14533 505 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 SSPNQ14714 243 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 PCSK7Q16549 785 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 NBPF1Q3BBV0 1214 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 C4orf17Q53FE4 359 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 ARSJQ5FYB0 599 aaPredicted RBP0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 FDX2Q6P4F2 183 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 SYCE2Q6PIF2 218 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 CYFIP1Q7L576 1253 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 ZNF366Q8N895 744 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 CHST13Q8NET6 341 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 PRR7Q8TB68 274 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 TMEM255BQ8WV15 326 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 GPKOWQ92917 476 aaPredicted RBP eCLIP0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 HLA-CQ95604 372 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 DACT3Q96B18 629 aaPredicted RBP0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 TBC1D32Q96NH3 1257 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 NECAB3Q96P71 396 aaPredicted RBP0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 TRIM8Q9BZR9 551 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 CYLDQ9NQC7 956 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 TMPRSS4Q9NRS4 437 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 PTGFRNQ9P2B2 879 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 MAP10Q9P2G4 905 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 TESQ9UGI8 421 aaKnown RBP0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 NAGPAQ9UK23 515 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 VAV3Q9UKW4 847 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 HCN2Q9UL51 889 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 ZFR2Q9UPR6 939 aaKnown RBP0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 IRAK3Q9Y616 596 aa0.12□□□□□ -2.39
TRAJ28-201ENST00000390509 TMEM265A0A087WTH1 108 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 TEX51A0A1B0GUA7 166 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 FAM95CA0A1B0GW59 222 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 FAM170BA6NMN3 283 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 PRR23D1E9PI22 279 aaPredicted RBP0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 SOCS7O14512 581 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 KCNAB3O43448 404 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 PEX10O60683 326 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 AOC2O75106 756 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 ECM2O94769 699 aaPredicted RBP0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 WISP1O95388 367 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 PRR23D2P0DMB1 279 aaPredicted RBP0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 FDX1P10109 184 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 CD46P15529 392 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 MCM7P33993 719 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 CNR2P34972 360 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 ADMP35318 185 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 GDNFP39905 211 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 CD96P40200 585 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 PLA2G4AP47712 749 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 KCNC1P48547 511 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 GDF10P55107 478 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 BRPF1P55201 1214 aaPredicted RBP0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 KRTAP10-3P60369 221 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 GUCA2AQ02747 115 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 CENPCQ03188 943 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 MVKQ03426 396 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 ZP2Q05996 745 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 PTK7Q13308 1070 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 IKZF1Q13422 519 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 SETDB1Q15047 1291 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 CDSNQ15517 529 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 IFI16Q16666 785 aaKnown RBP0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 AOC3Q16853 763 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 SGO2Q562F6 1265 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 COLEC12Q5KU26 742 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 TMEM132EQ6IEE7 984 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 ELMSAN1Q6PJG2 1045 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 LYPD8Q6UX82 237 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 KIAA1211Q6ZU35 1233 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 USP43Q70EL4 1123 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 ZNF765Q7L2R6 523 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 RAB44Q7Z6P3 723 aaPredicted RBP0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms