RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 NRXN1Q9ULB1 1477 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 KRTAP9-6A0A140TA67 174 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 SPDYE3A6NKU9 549 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 M0R082 166 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 SMTNP53814 917 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 GRIK4Q16099 956 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 RSPO4Q2I0M5 234 aaPredicted RBP3.37□□□□□ -1.87
TRAV41-201ENST00000390468 NBPF8Q3BBV2 869 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 FOXD4L6Q3SYB3 417 aaPredicted RBP3.37□□□□□ -1.87
TRAV41-201ENST00000390468 L1TD1Q5T7N2 865 aaKnown RBP3.37□□□□□ -1.87
TRAV41-201ENST00000390468 ZNF468Q5VIY5 522 aaPredicted RBP3.37□□□□□ -1.87
TRAV41-201ENST00000390468 FOXD4L3Q6VB84 417 aaPredicted RBP3.37□□□□□ -1.87
TRAV41-201ENST00000390468 LRRC69Q6ZNQ3 347 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 C8orf86Q6ZUL3 223 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 MTERF4Q7Z6M4 381 aaKnown RBP3.37□□□□□ -1.87
TRAV41-201ENST00000390468 SYT9Q86SS6 491 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 C1orf216Q8TAB5 229 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 ZNF417Q8TAU3 575 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 SIRT1Q96EB6 747 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 ZNF587Q96SQ5 575 aaPredicted RBP3.37□□□□□ -1.87
TRAV41-201ENST00000390468 CARD11Q9BXL7 1154 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 NEUROD4Q9HD90 331 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 MARK1Q9P0L2 795 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 BRPF3Q9ULD4 1205 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 CCDC9Q9Y3X0 531 aaKnown RBP3.37□□□□□ -1.87
TRAV41-201ENST00000390468 USP3Q9Y6I4 520 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 VIRMAQ69YN4 1812 aaKnown RBP3.37□□□□□ -1.87
TRAV41-201ENST00000390468 EIF3AQ14152 1382 aaKnown RBP3.37□□□□□ -1.87
TRAV41-201ENST00000390468 ALKQ9UM73 1620 aa3.37□□□□□ -1.87
TRAV41-201ENST00000390468 PIK3C2GO75747 1445 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 ELOA3CA0A087WX78 387 aaPredicted RBP3.36□□□□□ -1.87
TRAV41-201ENST00000390468 A6NJR5 290 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 ELOA3DA6NLF2 546 aaPredicted RBP3.36□□□□□ -1.87
TRAV41-201ENST00000390468 DYRK3O43781 588 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 CLSTN1O94985 981 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 HSPA5P11021 654 aaKnown RBP3.36□□□□□ -1.87
TRAV41-201ENST00000390468 PSME1Q06323 249 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 ELOA3BQ3SY89 546 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 TBCELQ5QJ74 424 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 AXDND1Q5T1B0 1012 aaPredicted RBP3.36□□□□□ -1.87
TRAV41-201ENST00000390468 SMAP1Q8IYB5 467 aaPredicted RBP3.36□□□□□ -1.87
TRAV41-201ENST00000390468 BANK1Q8NDB2 785 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 ELOA3Q8NG57 546 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 ZIC5Q96T25 663 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 HIRIP3Q9BW71 556 aaPredicted RBP3.36□□□□□ -1.87
TRAV41-201ENST00000390468 IGFLR1Q9H665 355 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 C1orf115Q9H7X2 142 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 ZFP64Q9NPA5 681 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 SLC52A1Q9NWF4 448 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 PPP4R2Q9NY27 417 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 ZNF232Q9UNY5 417 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 LAS1LQ9Y4W2 734 aaKnown RBP3.36□□□□□ -1.87
TRAV41-201ENST00000390468 DIP2AQ14689 1571 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 RPGRIP1LQ68CZ1 1315 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 ZMYM3Q14202 1370 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 GPRASP1Q5JY77 1395 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 TNRQ92752 1358 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 MON2Q7Z3U7 1717 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 NALCNQ8IZF0 1738 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 FMN2Q9NZ56 1722 aa3.36□□□□□ -1.87
TRAV41-201ENST00000390468 A2ML1A8K2U0 1454 aa3.35□□□□□ -1.87
TRAV41-201ENST00000390468 SCAF11Q99590 1463 aaKnown RBP3.35□□□□□ -1.87
TRAV41-201ENST00000390468 NLRP1Q9C000 1473 aa3.35□□□□□ -1.87
TRAV41-201ENST00000390468 ASXL1Q8IXJ9 1541 aa3.35□□□□□ -1.87
TRAV41-201ENST00000390468 ADGRB1O14514 1584 aa3.35□□□□□ -1.87
TRAV41-201ENST00000390468 A6NJY4 79 aa3.35□□□□□ -1.87
TRAV41-201ENST00000390468 RAD21O60216 631 aa3.35□□□□□ -1.87
TRAV41-201ENST00000390468 FAM157BP0CG42 384 aa3.35□□□□□ -1.87
TRAV41-201ENST00000390468 TXLNAP40222 546 aa3.35□□□□□ -1.87
TRAV41-201ENST00000390468 ABL2P42684 1182 aa3.35□□□□□ -1.87
TRAV41-201ENST00000390468 IRX3P78415 501 aaPredicted RBP3.35□□□□□ -1.87
TRAV41-201ENST00000390468 TRIM28Q13263 835 aaKnown RBP3.35□□□□□ -1.87
TRAV41-201ENST00000390468 PRSS36Q5K4E3 855 aa3.35□□□□□ -1.87
TRAV41-201ENST00000390468 NKAPLQ5M9Q1 402 aa3.35□□□□□ -1.87
TRAV41-201ENST00000390468 FAM182BQ5T319 152 aa3.35□□□□□ -1.87
TRAV41-201ENST00000390468 PLPP7Q8NBV4 271 aa3.35□□□□□ -1.87
TRAV41-201ENST00000390468 CLUAP1Q96AJ1 413 aa3.35□□□□□ -1.87
TRAV41-201ENST00000390468 RIMS2Q9UQ26 1411 aa3.35□□□□□ -1.87
TRAV41-201ENST00000390468 USP32Q8NFA0 1604 aa3.34□□□□□ -1.87
TRAV41-201ENST00000390468 TOPAZ1Q8N9V7 1692 aa3.34□□□□□ -1.87
TRAV41-201ENST00000390468 XRN1Q8IZH2 1706 aaKnown RBP3.34□□□□□ -1.87
TRAV41-201ENST00000390468 TMEM229AB2RXF0 380 aa3.34□□□□□ -1.87
TRAV41-201ENST00000390468 CLGNO14967 610 aa3.34□□□□□ -1.87
TRAV41-201ENST00000390468 ALBP02768 609 aa3.34□□□□□ -1.87
TRAV41-201ENST00000390468 SFSWAPQ12872 951 aaKnown RBP3.34□□□□□ -1.87
TRAV41-201ENST00000390468 DDX10Q13206 875 aaKnown RBP3.34□□□□□ -1.87
TRAV41-201ENST00000390468 SEMA3FQ13275 785 aa3.34□□□□□ -1.87
TRAV41-201ENST00000390468 IDI1Q13907 227 aa3.34□□□□□ -1.87
TRAV41-201ENST00000390468 TRAPPC3LQ5T215 181 aa3.34□□□□□ -1.87
TRAV41-201ENST00000390468 ARTNQ5T4W7 220 aa3.34□□□□□ -1.87
TRAV41-201ENST00000390468 KRTAP1-3Q8IUG1 177 aa3.34□□□□□ -1.87
TRAV41-201ENST00000390468 PHTF2Q8N3S3 785 aa3.34□□□□□ -1.87
TRAV41-201ENST00000390468 SLC30A3Q99726 388 aa3.34□□□□□ -1.87
TRAV41-201ENST00000390468 PRM3Q9NNZ6 103 aa3.34□□□□□ -1.87
TRAV41-201ENST00000390468 AVENQ9NQS1 362 aaPredicted RBP3.34□□□□□ -1.87
TRAV41-201ENST00000390468 CCDC7Q96M83 1385 aa3.34□□□□□ -1.88
TRAV41-201ENST00000390468 ZFYVE9O95405 1425 aa3.34□□□□□ -1.88
TRAV41-201ENST00000390468 SLIT1O75093 1534 aa3.34□□□□□ -1.88
TRAV41-201ENST00000390468 CPS1P31327 1500 aa3.34□□□□□ -1.88
TRAV41-201ENST00000390468 DLC1Q96QB1 1528 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms