RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 PLEKHA4Q9H4M7 779 aa17.6■□□□□ 0.41
ALK-201ENST00000389048 ODF2LQ9ULJ1 636 aa17.6■□□□□ 0.41
ALK-201ENST00000389048 APOBRQ0VD83 1088 aa17.59■□□□□ 0.41
ALK-201ENST00000389048 CHRNA2Q15822 529 aa17.59■□□□□ 0.41
ALK-201ENST00000389048 LONRF3Q496Y0 759 aa17.59■□□□□ 0.41
ALK-201ENST00000389048 KCNH5Q8NCM2 988 aa17.59■□□□□ 0.41
ALK-201ENST00000389048 CEP83Q9Y592 693 aa17.59■□□□□ 0.41
ALK-201ENST00000389048 SMC1BQ8NDV3 1235 aa17.59■□□□□ 0.41
ALK-201ENST00000389048 MRPS27Q92552 414 aaKnown RBP17.59■□□□□ 0.41
ALK-201ENST00000389048 CHPF2Q9P2E5 772 aa17.59■□□□□ 0.41
ALK-201ENST00000389048 TBC1D32Q96NH3 1257 aa17.59■□□□□ 0.41
ALK-201ENST00000389048 HARSP12081 509 aaKnown RBP17.59■□□□□ 0.41
ALK-201ENST00000389048 KRBA2Q6ZNG9 492 aa17.59■□□□□ 0.41
ALK-201ENST00000389048 U2AF2P26368 475 aaKnown RBP eCLIP17.58■□□□□ 0.41
ALK-201ENST00000389048 KRT9P35527 623 aa17.58■□□□□ 0.41
ALK-201ENST00000389048 CFAP157Q5JU67 520 aa17.58■□□□□ 0.41
ALK-201ENST00000389048 SIRT1Q96EB6 747 aa17.58■□□□□ 0.41
ALK-201ENST00000389048 CTAGE1Q96RT6 745 aa17.58■□□□□ 0.41
ALK-201ENST00000389048 PPP2R5CQ13362 524 aa17.58■□□□□ 0.41
ALK-201ENST00000389048 MEIS3Q99687 375 aa17.58■□□□□ 0.41
ALK-201ENST00000389048 IVLP07476 585 aa17.58■□□□□ 0.4
ALK-201ENST00000389048 WDHD1O75717 1129 aaPredicted RBP17.58■□□□□ 0.4
ALK-201ENST00000389048 SMARCC2Q8TAQ2 1214 aa17.58■□□□□ 0.4
ALK-201ENST00000389048 ZSCAN16Q9H4T2 348 aaPredicted RBP17.58■□□□□ 0.4
ALK-201ENST00000389048 CCDC172P0C7W6 258 aa17.57■□□□□ 0.4
ALK-201ENST00000389048 KRT5P13647 590 aa17.57■□□□□ 0.4
ALK-201ENST00000389048 PRG4Q92954 1404 aaPredicted RBP17.57■□□□□ 0.4
ALK-201ENST00000389048 LRPPRCP42704 1394 aaKnown RBP17.57■□□□□ 0.4
ALK-201ENST00000389048 TTC36A6NLP5 189 aa17.57■□□□□ 0.4
ALK-201ENST00000389048 SLU7O95391 586 aaKnown RBP17.57■□□□□ 0.4
ALK-201ENST00000389048 CTNND2Q9UQB3 1225 aa17.57■□□□□ 0.4
ALK-201ENST00000389048 CCDC61Q9Y6R9 512 aa17.57■□□□□ 0.4
ALK-201ENST00000389048 NMIQ13287 307 aaPredicted RBP17.57■□□□□ 0.4
ALK-201ENST00000389048 PPP2R5DQ14738 602 aa17.57■□□□□ 0.4
ALK-201ENST00000389048 ERMNQ8TAM6 284 aa17.57■□□□□ 0.4
ALK-201ENST00000389048 NOL3O60936 208 aaKnown RBP17.57■□□□□ 0.4
ALK-201ENST00000389048 VIMP08670 466 aaKnown RBP17.57■□□□□ 0.4
ALK-201ENST00000389048 PSMD6Q15008 389 aa17.57■□□□□ 0.4
ALK-201ENST00000389048 GEN1Q17RS7 908 aa17.57■□□□□ 0.4
ALK-201ENST00000389048 RFC4P35249 363 aa17.57■□□□□ 0.4
ALK-201ENST00000389048 KIF5AQ12840 1032 aa17.57■□□□□ 0.4
ALK-201ENST00000389048 SLC39A6Q13433 755 aa17.57■□□□□ 0.4
ALK-201ENST00000389048 KSR1Q8IVT5 923 aa17.56■□□□□ 0.4
ALK-201ENST00000389048 TNNI2P48788 182 aa17.56■□□□□ 0.4
ALK-201ENST00000389048 TYRO3Q06418 890 aa17.56■□□□□ 0.4
ALK-201ENST00000389048 CDC5LQ99459 802 aaKnown RBP17.56■□□□□ 0.4
ALK-201ENST00000389048 F13A1P00488 732 aa17.56■□□□□ 0.4
ALK-201ENST00000389048 RHPN1Q8TCX5 695 aa17.56■□□□□ 0.4
ALK-201ENST00000389048 CCDC42Q96M95 316 aa17.56■□□□□ 0.4
ALK-201ENST00000389048 CCDC77Q9BR77 488 aa17.56■□□□□ 0.4
ALK-201ENST00000389048 ATP6V0A2Q9Y487 856 aa17.56■□□□□ 0.4
ALK-201ENST00000389048 NEK11Q8NG66 645 aa17.56■□□□□ 0.4
ALK-201ENST00000389048 PLVAPQ9BX97 442 aa17.56■□□□□ 0.4
ALK-201ENST00000389048 NBPF11Q86T75 865 aa17.55■□□□□ 0.4
ALK-201ENST00000389048 ZGPATQ8N5A5 531 aaKnown RBP17.55■□□□□ 0.4
ALK-201ENST00000389048 TXNDC16Q9P2K2 825 aa17.55■□□□□ 0.4
ALK-201ENST00000389048 PTPRCP08575 1304 aa17.55■□□□□ 0.4
ALK-201ENST00000389048 PSMA7O14818 248 aa17.55■□□□□ 0.4
ALK-201ENST00000389048 CLSTN2Q9H4D0 955 aa17.55■□□□□ 0.4
ALK-201ENST00000389048 VEZTQ9HBM0 779 aa17.55■□□□□ 0.4
ALK-201ENST00000389048 PFDN4Q9NQP4 134 aa17.55■□□□□ 0.4
ALK-201ENST00000389048 FAM169AQ9Y6X4 670 aa17.55■□□□□ 0.4
ALK-201ENST00000389048 HELBQ8NG08 1087 aaPredicted RBP17.55■□□□□ 0.4
ALK-201ENST00000389048 CEP85LQ5SZL2 805 aa17.55■□□□□ 0.4
ALK-201ENST00000389048 LRRC27Q9C0I9 530 aa17.55■□□□□ 0.4
ALK-201ENST00000389048 MAPK8IP1Q9UQF2 711 aa17.55■□□□□ 0.4
ALK-201ENST00000389048 POLA1P09884 1462 aaPredicted RBP17.55■□□□□ 0.4
ALK-201ENST00000389048 CASKIN1Q8WXD9 1431 aa17.55■□□□□ 0.4
ALK-201ENST00000389048 TNNQ9UQP3 1299 aa17.54■□□□□ 0.4
ALK-201ENST00000389048 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.54■□□□□ 0.4
ALK-201ENST00000389048 AMOTQ4VCS5 1084 aa17.54■□□□□ 0.4
ALK-201ENST00000389048 KCNG4Q8TDN1 519 aa17.54■□□□□ 0.4
ALK-201ENST00000389048 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.54■□□□□ 0.4
ALK-201ENST00000389048 PPANQ9NQ55 473 aaKnown RBP17.54■□□□□ 0.4
ALK-201ENST00000389048 HFM1A2PYH4 1435 aa17.54■□□□□ 0.4
ALK-201ENST00000389048 NBPF7P0C2Y1 421 aaPredicted RBP17.54■□□□□ 0.4
ALK-201ENST00000389048 BMP2KLQ5H9B9 411 aa17.54■□□□□ 0.4
ALK-201ENST00000389048 NBPF6Q5VWK0 638 aa17.54■□□□□ 0.4
ALK-201ENST00000389048 NBPF5PQ86XG9 351 aaPredicted RBP17.54■□□□□ 0.4
ALK-201ENST00000389048 C17orf53Q8N3J3 647 aaPredicted RBP17.54■□□□□ 0.4
ALK-201ENST00000389048 NBPF4Q96M43 638 aa17.54■□□□□ 0.4
ALK-201ENST00000389048 RIMBP2O15034 1052 aa17.54■□□□□ 0.4
ALK-201ENST00000389048 CPA1P15085 419 aa17.54■□□□□ 0.4
ALK-201ENST00000389048 ARID4AP29374 1257 aaPredicted RBP17.54■□□□□ 0.4
ALK-201ENST00000389048 FAM200AQ8TCP9 573 aa17.54■□□□□ 0.4
ALK-201ENST00000389048 NUCB1Q02818 461 aa17.54■□□□□ 0.4
ALK-201ENST00000389048 NGLY1Q96IV0 654 aa17.54■□□□□ 0.4
ALK-201ENST00000389048 TRIM31Q9BZY9 425 aa17.54■□□□□ 0.4
ALK-201ENST00000389048 EBAG9O00559 213 aa17.53■□□□□ 0.4
ALK-201ENST00000389048 SLC9C2Q5TAH2 1124 aa17.53■□□□□ 0.4
ALK-201ENST00000389048 MAK16Q9BXY0 300 aaKnown RBP17.53■□□□□ 0.4
ALK-201ENST00000389048 EPSTI1Q96J88 318 aa17.53■□□□□ 0.4
ALK-201ENST00000389048 TRIM7Q9C029 511 aa17.53■□□□□ 0.4
ALK-201ENST00000389048 KRT23Q9C075 422 aa17.53■□□□□ 0.4
ALK-201ENST00000389048 SAMD15Q9P1V8 674 aa17.53■□□□□ 0.4
ALK-201ENST00000389048 PYM1Q9BRP8 204 aaKnown RBP17.53■□□□□ 0.4
ALK-201ENST00000389048 HMG20BQ9P0W2 317 aa17.53■□□□□ 0.4
ALK-201ENST00000389048 EXOC5O00471 708 aa17.53■□□□□ 0.4
ALK-201ENST00000389048 SAP30BPQ9UHR5 308 aaKnown RBP17.53■□□□□ 0.4
ALK-201ENST00000389048 CRCPO75575 148 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms