RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 NSUN7Q8NE18 718 aaKnown RBP17.64■□□□□ 0.42
SCFD2-201ENST00000388940 OSBP2Q969R2 916 aa17.64■□□□□ 0.42
SCFD2-201ENST00000388940 ZNF274Q96GC6 653 aaPredicted RBP17.64■□□□□ 0.42
SCFD2-201ENST00000388940 FAM89AQ96GI7 184 aa17.64■□□□□ 0.42
SCFD2-201ENST00000388940 CTNNA3Q9UI47 895 aa17.64■□□□□ 0.42
SCFD2-201ENST00000388940 RRP9O43818 475 aaKnown RBP17.64■□□□□ 0.41
SCFD2-201ENST00000388940 GORABQ5T7V8 394 aa17.64■□□□□ 0.41
SCFD2-201ENST00000388940 LRRC2Q9BYS8 371 aa17.64■□□□□ 0.41
SCFD2-201ENST00000388940 NUP62CLQ9H1M0 184 aa17.64■□□□□ 0.41
SCFD2-201ENST00000388940 DDX19AQ9NUU7 478 aaKnown RBP17.64■□□□□ 0.41
SCFD2-201ENST00000388940 USP25Q9UHP3 1055 aa17.64■□□□□ 0.41
SCFD2-201ENST00000388940 KIF3AQ9Y496 699 aa17.64■□□□□ 0.41
SCFD2-201ENST00000388940 H3BQV1 296 aa17.63■□□□□ 0.41
SCFD2-201ENST00000388940 PTMAP06454 111 aaKnown RBP17.63■□□□□ 0.41
SCFD2-201ENST00000388940 TPM2P07951 284 aa17.63■□□□□ 0.41
SCFD2-201ENST00000388940 LIG1P18858 919 aa17.63■□□□□ 0.41
SCFD2-201ENST00000388940 ADORA1P30542 326 aa17.63■□□□□ 0.41
SCFD2-201ENST00000388940 EVCP57679 992 aa17.63■□□□□ 0.41
SCFD2-201ENST00000388940 FKBP4Q02790 459 aaKnown RBP eCLIP17.63■□□□□ 0.41
SCFD2-201ENST00000388940 MAP3K11Q16584 847 aa17.63■□□□□ 0.41
SCFD2-201ENST00000388940 IFFO2Q5TF58 517 aa17.63■□□□□ 0.41
SCFD2-201ENST00000388940 TFIP11Q9UBB9 837 aaKnown RBP17.63■□□□□ 0.41
SCFD2-201ENST00000388940 CFAP45Q9UL16 551 aa17.63■□□□□ 0.41
SCFD2-201ENST00000388940 NWD2Q9ULI1 1742 aa17.63■□□□□ 0.41
SCFD2-201ENST00000388940 COL14A1Q05707 1796 aaKnown RBP17.63■□□□□ 0.41
SCFD2-201ENST00000388940 BCL9O00512 1426 aa17.63■□□□□ 0.41
SCFD2-201ENST00000388940 GOLGA6L4A6NEF3 574 aa17.63■□□□□ 0.41
SCFD2-201ENST00000388940 ADCY5O95622 1261 aa17.63■□□□□ 0.41
SCFD2-201ENST00000388940 TAF7LQ5H9L4 462 aa17.63■□□□□ 0.41
SCFD2-201ENST00000388940 RBM43Q6ZSC3 357 aaKnown RBP17.63■□□□□ 0.41
SCFD2-201ENST00000388940 RIPOR2Q9Y4F9 1068 aa17.63■□□□□ 0.41
SCFD2-201ENST00000388940 AKAP11Q9UKA4 1901 aa17.62■□□□□ 0.41
SCFD2-201ENST00000388940 PLCH1Q4KWH8 1693 aa17.62■□□□□ 0.41
SCFD2-201ENST00000388940 CTDNEP1O95476 244 aa17.62■□□□□ 0.41
SCFD2-201ENST00000388940 APOBRQ0VD83 1088 aa17.62■□□□□ 0.41
SCFD2-201ENST00000388940 NLRP10Q86W26 655 aa17.62■□□□□ 0.41
SCFD2-201ENST00000388940 ZNF512BQ96KM6 892 aaPredicted RBP17.62■□□□□ 0.41
SCFD2-201ENST00000388940 ZNF330Q9Y3S2 320 aaPredicted RBP17.62■□□□□ 0.41
SCFD2-201ENST00000388940 SALL1Q9NSC2 1324 aa17.62■□□□□ 0.41
SCFD2-201ENST00000388940 RIC1Q4ADV7 1423 aa17.62■□□□□ 0.41
SCFD2-201ENST00000388940 DDX11Q96FC9 970 aa17.62■□□□□ 0.41
SCFD2-201ENST00000388940 BTG4Q9NY30 223 aa17.62■□□□□ 0.41
SCFD2-201ENST00000388940 NUP98P52948 1817 aa17.61■□□□□ 0.41
SCFD2-201ENST00000388940 CYP19A1P11511 503 aaPredicted RBP17.61■□□□□ 0.41
SCFD2-201ENST00000388940 ATL3Q6DD88 541 aa17.61■□□□□ 0.41
SCFD2-201ENST00000388940 TTLL11Q8NHH1 800 aa17.61■□□□□ 0.41
SCFD2-201ENST00000388940 APPBP2Q92624 585 aa17.61■□□□□ 0.41
SCFD2-201ENST00000388940 PTPDC1A2A3K4 754 aa17.6■□□□□ 0.41
SCFD2-201ENST00000388940 PDIA3P30101 505 aaKnown RBP17.6■□□□□ 0.41
SCFD2-201ENST00000388940 HLFQ16534 295 aa17.6■□□□□ 0.41
SCFD2-201ENST00000388940 PGBD1Q96JS3 809 aa17.6■□□□□ 0.41
SCFD2-201ENST00000388940 CLSTN2Q9H4D0 955 aa17.6■□□□□ 0.41
SCFD2-201ENST00000388940 DACT1Q9NYF0 836 aa17.6■□□□□ 0.41
SCFD2-201ENST00000388940 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.6■□□□□ 0.41
SCFD2-201ENST00000388940 DDX60Q8IY21 1712 aaKnown RBP17.6■□□□□ 0.41
SCFD2-201ENST00000388940 A0A0G2JLW4 131 aa17.6■□□□□ 0.41
SCFD2-201ENST00000388940 FOXP2O15409 715 aa17.6■□□□□ 0.41
SCFD2-201ENST00000388940 ATP2B3Q16720 1220 aa17.6■□□□□ 0.41
SCFD2-201ENST00000388940 TNMDQ9H2S6 317 aa17.6■□□□□ 0.41
SCFD2-201ENST00000388940 ADD1P35611 737 aaKnown RBP17.59■□□□□ 0.41
SCFD2-201ENST00000388940 ZAP70P43403 619 aa17.59■□□□□ 0.41
SCFD2-201ENST00000388940 SCARF1Q14162 830 aa17.59■□□□□ 0.41
SCFD2-201ENST00000388940 IMMTQ16891 758 aaKnown RBP17.59■□□□□ 0.41
SCFD2-201ENST00000388940 FAM200AQ8TCP9 573 aa17.59■□□□□ 0.41
SCFD2-201ENST00000388940 ANKRD18BA2A2Z9 1011 aa17.59■□□□□ 0.41
SCFD2-201ENST00000388940 ERVV-1B6SEH8 477 aa17.59■□□□□ 0.41
SCFD2-201ENST00000388940 ITGA6P23229 1130 aa17.59■□□□□ 0.41
SCFD2-201ENST00000388940 CTSWP56202 376 aa17.59■□□□□ 0.41
SCFD2-201ENST00000388940 TYRO3Q06418 890 aa17.59■□□□□ 0.41
SCFD2-201ENST00000388940 WASHC4Q2M389 1173 aa17.59■□□□□ 0.41
SCFD2-201ENST00000388940 TTLL5Q6EMB2 1281 aa17.59■□□□□ 0.41
SCFD2-201ENST00000388940 RCOR1Q9UKL0 485 aa17.59■□□□□ 0.41
SCFD2-201ENST00000388940 MRVI1Q9Y6F6 885 aa17.59■□□□□ 0.41
SCFD2-201ENST00000388940 METTL24Q5JXM2 366 aa17.58■□□□□ 0.4
SCFD2-201ENST00000388940 LDHAL6AQ6ZMR3 332 aa17.58■□□□□ 0.4
SCFD2-201ENST00000388940 SLC4A9Q96Q91 983 aa17.58■□□□□ 0.4
SCFD2-201ENST00000388940 FGAP02671 866 aa17.57■□□□□ 0.4
SCFD2-201ENST00000388940 KIAA2012Q0VF49 1180 aa17.57■□□□□ 0.4
SCFD2-201ENST00000388940 ZSCAN25Q6NSZ9 544 aa17.57■□□□□ 0.4
SCFD2-201ENST00000388940 VGLL2Q8N8G2 317 aa17.57■□□□□ 0.4
SCFD2-201ENST00000388940 CCDC85AQ96PX6 553 aaPredicted RBP17.57■□□□□ 0.4
SCFD2-201ENST00000388940 GREM2Q9H772 168 aa17.57■□□□□ 0.4
SCFD2-201ENST00000388940 WNK3Q9BYP7 1800 aa17.57■□□□□ 0.4
SCFD2-201ENST00000388940 WDR19Q8NEZ3 1342 aa17.57■□□□□ 0.4
SCFD2-201ENST00000388940 CCT2P78371 535 aaKnown RBP17.57■□□□□ 0.4
SCFD2-201ENST00000388940 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.57■□□□□ 0.4
SCFD2-201ENST00000388940 ATRNO75882 1429 aa17.57■□□□□ 0.4
SCFD2-201ENST00000388940 IRS4O14654 1257 aaPredicted RBP17.56■□□□□ 0.4
SCFD2-201ENST00000388940 PDE8AO60658 829 aa17.56■□□□□ 0.4
SCFD2-201ENST00000388940 HSP90AA2PQ14568 343 aaPredicted RBP17.56■□□□□ 0.4
SCFD2-201ENST00000388940 TTF1Q15361 905 aaPredicted RBP17.56■□□□□ 0.4
SCFD2-201ENST00000388940 CAMK4Q16566 473 aa17.56■□□□□ 0.4
SCFD2-201ENST00000388940 MB21D2Q8IYB1 491 aaPredicted RBP17.56■□□□□ 0.4
SCFD2-201ENST00000388940 SYNE4Q8N205 404 aa17.56■□□□□ 0.4
SCFD2-201ENST00000388940 PUS7LQ9H0K6 701 aaKnown RBP17.56■□□□□ 0.4
SCFD2-201ENST00000388940 GPTP24298 496 aa17.56■□□□□ 0.4
SCFD2-201ENST00000388940 IL6STP40189 918 aaPredicted RBP17.56■□□□□ 0.4
SCFD2-201ENST00000388940 BICD2Q8TD16 824 aa17.56■□□□□ 0.4
SCFD2-201ENST00000388940 ZNF396Q96N95 335 aaPredicted RBP17.56■□□□□ 0.4
SCFD2-201ENST00000388940 AP5Z1O43299 807 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms