RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 TFCP2Q12800 502 aa21.8■■□□□ 1.08
CD9-202ENST00000382515 HDAC1Q13547 482 aaPredicted RBP21.8■■□□□ 1.08
CD9-202ENST00000382515 ATP2B3Q16720 1220 aa21.8■■□□□ 1.08
CD9-202ENST00000382515 FBXO33Q7Z6M2 555 aa21.8■■□□□ 1.08
CD9-202ENST00000382515 KIF1BPQ96EK5 621 aa21.8■■□□□ 1.08
CD9-202ENST00000382515 DCTPP1Q9H773 170 aa21.8■■□□□ 1.08
CD9-202ENST00000382515 KDM2BQ8NHM5 1336 aa21.8■■□□□ 1.08
CD9-202ENST00000382515 IRS2Q9Y4H2 1338 aa21.8■■□□□ 1.08
CD9-202ENST00000382515 WTIPA6NIX2 430 aaPredicted RBP21.79■■□□□ 1.08
CD9-202ENST00000382515 ECE2O60344 883 aa21.79■■□□□ 1.08
CD9-202ENST00000382515 VPS37DQ86XT2 251 aa21.79■■□□□ 1.08
CD9-202ENST00000382515 GPC2Q8N158 579 aa21.79■■□□□ 1.08
CD9-202ENST00000382515 FAM84BQ96KN1 310 aaPredicted RBP21.79■■□□□ 1.08
CD9-202ENST00000382515 RWDD1Q9H446 243 aaPredicted RBP21.79■■□□□ 1.08
CD9-202ENST00000382515 CD209Q9NNX6 404 aa21.79■■□□□ 1.08
CD9-202ENST00000382515 SNAP23O00161 211 aa21.78■■□□□ 1.08
CD9-202ENST00000382515 IL1R1P14778 569 aa21.78■■□□□ 1.08
CD9-202ENST00000382515 DOK7Q18PE1 504 aa21.78■■□□□ 1.08
CD9-202ENST00000382515 CIAPIN1Q6FI81 312 aa21.78■■□□□ 1.08
CD9-202ENST00000382515 TXNRD3Q86VQ6 643 aa21.78■■□□□ 1.08
CD9-202ENST00000382515 GNL3LQ9NVN8 582 aaKnown RBP21.78■■□□□ 1.08
CD9-202ENST00000382515 MMP14P50281 582 aa21.77■■□□□ 1.08
CD9-202ENST00000382515 CXCL9Q07325 125 aa21.77■■□□□ 1.08
CD9-202ENST00000382515 GPR101Q96P66 508 aaPredicted RBP21.77■■□□□ 1.08
CD9-202ENST00000382515 DBNDD1Q9H9R9 158 aa21.77■■□□□ 1.08
CD9-202ENST00000382515 EXOC6BQ9Y2D4 811 aa21.77■■□□□ 1.08
CD9-202ENST00000382515 A0A1B0GUL7 405 aa21.76■■□□□ 1.07
CD9-202ENST00000382515 TIMM10P62072 90 aa21.76■■□□□ 1.07
CD9-202ENST00000382515 STRIP1Q5VSL9 837 aa21.76■■□□□ 1.07
CD9-202ENST00000382515 CLASRPQ8N2M8 674 aaKnown RBP21.76■■□□□ 1.07
CD9-202ENST00000382515 RHPN1Q8TCX5 695 aa21.76■■□□□ 1.07
CD9-202ENST00000382515 GCC1Q96CN9 775 aa21.76■■□□□ 1.07
CD9-202ENST00000382515 DUOX1Q9NRD9 1551 aa21.76■■□□□ 1.07
CD9-202ENST00000382515 USP17L3A6NCW0 530 aa21.75■■□□□ 1.07
CD9-202ENST00000382515 USP17L4A6NCW7 530 aa21.75■■□□□ 1.07
CD9-202ENST00000382515 YDJCA8MPS7 323 aa21.75■■□□□ 1.07
CD9-202ENST00000382515 VIL1P09327 827 aaKnown RBP21.75■■□□□ 1.07
CD9-202ENST00000382515 RPS12P25398 132 aaKnown RBP21.75■■□□□ 1.07
CD9-202ENST00000382515 USP17L1Q7RTZ2 530 aa21.75■■□□□ 1.07
CD9-202ENST00000382515 TDRD7Q8NHU6 1098 aaKnown RBP21.75■■□□□ 1.07
CD9-202ENST00000382515 CACNA1SQ13698 1873 aa21.75■■□□□ 1.07
CD9-202ENST00000382515 SEMA3EO15041 775 aa21.74■■□□□ 1.07
CD9-202ENST00000382515 NEFLP07196 543 aa21.74■■□□□ 1.07
CD9-202ENST00000382515 KLRK1P26718 216 aa21.74■■□□□ 1.07
CD9-202ENST00000382515 TNNI3KQ59H18 835 aa21.74■■□□□ 1.07
CD9-202ENST00000382515 TTLL5Q6EMB2 1281 aa21.74■■□□□ 1.07
CD9-202ENST00000382515 DPF2Q92785 391 aa21.74■■□□□ 1.07
CD9-202ENST00000382515 L3MBTL3Q96JM7 780 aaPredicted RBP21.74■■□□□ 1.07
CD9-202ENST00000382515 NEUROD6Q96NK8 337 aa21.74■■□□□ 1.07
CD9-202ENST00000382515 FPGT-TNNI3KV9GXZ4 949 aa21.74■■□□□ 1.07
CD9-202ENST00000382515 LTBP1Q14766 1721 aa21.74■■□□□ 1.07
CD9-202ENST00000382515 GYG1P46976 350 aa21.73■■□□□ 1.07
CD9-202ENST00000382515 FKBP1AP62942 108 aaKnown RBP21.73■■□□□ 1.07
CD9-202ENST00000382515 XAGE2Q96GT9 111 aa21.73■■□□□ 1.07
CD9-202ENST00000382515 LRRCC1Q9C099 1032 aa21.73■■□□□ 1.07
CD9-202ENST00000382515 IQCA1LA6NCM1 817 aa21.72■■□□□ 1.07
CD9-202ENST00000382515 RAD17O75943 681 aa21.72■■□□□ 1.07
CD9-202ENST00000382515 BCAMP50895 628 aa21.72■■□□□ 1.07
CD9-202ENST00000382515 GORABQ5T7V8 394 aa21.72■■□□□ 1.07
CD9-202ENST00000382515 AGBL3Q8NEM8 1001 aa21.72■■□□□ 1.07
CD9-202ENST00000382515 MYO3BQ8WXR4 1341 aa21.72■■□□□ 1.07
CD9-202ENST00000382515 SBF1O95248 1867 aa21.71■■□□□ 1.07
CD9-202ENST00000382515 CHD4Q14839 1912 aa21.71■■□□□ 1.07
CD9-202ENST00000382515 FRAT2O75474 233 aaPredicted RBP21.71■■□□□ 1.07
CD9-202ENST00000382515 DDNO94850 711 aaPredicted RBP21.71■■□□□ 1.07
CD9-202ENST00000382515 CCDC158Q5M9N0 1113 aa21.71■■□□□ 1.07
CD9-202ENST00000382515 ERICH6BQ5W0A0 696 aa21.71■■□□□ 1.07
CD9-202ENST00000382515 FAM205AQ6ZU69 1335 aa21.71■■□□□ 1.07
CD9-202ENST00000382515 PSMD14O00487 310 aa21.7■■□□□ 1.06
CD9-202ENST00000382515 VEGFAP15692 232 aaPredicted RBP21.7■■□□□ 1.06
CD9-202ENST00000382515 IRX6P78412 446 aaPredicted RBP21.7■■□□□ 1.06
CD9-202ENST00000382515 CCDC102BQ68D86 513 aa21.7■■□□□ 1.06
CD9-202ENST00000382515 RSBN1LQ6PCB5 846 aaPredicted RBP21.7■■□□□ 1.06
CD9-202ENST00000382515 TBC1D22AQ8WUA7 517 aa21.7■■□□□ 1.06
CD9-202ENST00000382515 ZNF512BQ96KM6 892 aaPredicted RBP21.7■■□□□ 1.06
CD9-202ENST00000382515 GPBP1L1Q9HC44 474 aaPredicted RBP21.7■■□□□ 1.06
CD9-202ENST00000382515 ZBTB47Q9UFB7 747 aaPredicted RBP21.7■■□□□ 1.06
CD9-202ENST00000382515 DENND2AQ9ULE3 1009 aa21.7■■□□□ 1.06
CD9-202ENST00000382515 GJA3Q9Y6H8 435 aa21.7■■□□□ 1.06
CD9-202ENST00000382515 ZNF541Q9H0D2 1346 aa21.7■■□□□ 1.06
CD9-202ENST00000382515 UQCRFS1P1P0C7P4 283 aa21.69■■□□□ 1.06
CD9-202ENST00000382515 GTF2IP78347 998 aa21.69■■□□□ 1.06
CD9-202ENST00000382515 EAF2Q96CJ1 260 aaPredicted RBP21.69■■□□□ 1.06
CD9-202ENST00000382515 IGSF3O75054 1194 aa21.68■■□□□ 1.06
CD9-202ENST00000382515 IFIT2P09913 472 aaKnown RBP21.68■■□□□ 1.06
CD9-202ENST00000382515 LMOD1P29536 600 aaPredicted RBP21.68■■□□□ 1.06
CD9-202ENST00000382515 DACT2Q5SW24 774 aa21.68■■□□□ 1.06
CD9-202ENST00000382515 WDR66Q8TBY9 1149 aa21.68■■□□□ 1.06
CD9-202ENST00000382515 KCNQ5Q9NR82 932 aa21.68■■□□□ 1.06
CD9-202ENST00000382515 SUGT1Q9Y2Z0 365 aa21.68■■□□□ 1.06
CD9-202ENST00000382515 PDS5AQ29RF7 1337 aaKnown RBP21.67■■□□□ 1.06
CD9-202ENST00000382515 SMC5Q8IY18 1101 aa21.67■■□□□ 1.06
CD9-202ENST00000382515 ZNF784Q8NCA9 323 aaPredicted RBP21.67■■□□□ 1.06
CD9-202ENST00000382515 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.67■■□□□ 1.06
CD9-202ENST00000382515 COL4A5P29400 1685 aa21.66■■□□□ 1.06
CD9-202ENST00000382515 H7C1D1 291 aa21.66■■□□□ 1.06
CD9-202ENST00000382515 ADORA1P30542 326 aa21.66■■□□□ 1.06
CD9-202ENST00000382515 AACSQ86V21 672 aa21.66■■□□□ 1.06
CD9-202ENST00000382515 OGFOD1Q8N543 542 aa21.66■■□□□ 1.06
CD9-202ENST00000382515 GMLQ99445 158 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms