RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.64□□□□□ -0.07
CDX2-201ENST00000381020 SLIT1O75093 1534 aa14.64□□□□□ -0.07
CDX2-201ENST00000381020 ERBB4Q15303 1308 aa14.64□□□□□ -0.07
CDX2-201ENST00000381020 PTPDC1A2A3K4 754 aa14.63□□□□□ -0.07
CDX2-201ENST00000381020 LARGE1O95461 756 aa14.63□□□□□ -0.07
CDX2-201ENST00000381020 CDK11BP21127 795 aaKnown RBP14.63□□□□□ -0.07
CDX2-201ENST00000381020 PDIA6Q15084 440 aa14.63□□□□□ -0.07
CDX2-201ENST00000381020 OTUD7BQ6GQQ9 843 aa14.63□□□□□ -0.07
CDX2-201ENST00000381020 GIGYF2Q6Y7W6 1299 aaKnown RBP14.63□□□□□ -0.07
CDX2-201ENST00000381020 SMARCC1Q92922 1105 aaPredicted RBP14.63□□□□□ -0.07
CDX2-201ENST00000381020 RBSNQ9H1K0 784 aa14.63□□□□□ -0.07
CDX2-201ENST00000381020 SLC4A4Q9Y6R1 1079 aa14.63□□□□□ -0.07
CDX2-201ENST00000381020 SNAP23O00161 211 aa14.63□□□□□ -0.07
CDX2-201ENST00000381020 METAP2P50579 478 aaKnown RBP eCLIP14.63□□□□□ -0.07
CDX2-201ENST00000381020 NLRP3Q96P20 1036 aa14.63□□□□□ -0.07
CDX2-201ENST00000381020 HELLSQ9NRZ9 838 aa14.63□□□□□ -0.07
CDX2-201ENST00000381020 NCAPD2Q15021 1401 aa14.63□□□□□ -0.07
CDX2-201ENST00000381020 GNPATO15228 680 aa14.63□□□□□ -0.07
CDX2-201ENST00000381020 MFSD6Q6ZSS7 791 aa14.63□□□□□ -0.07
CDX2-201ENST00000381020 CDC37L1Q7L3B6 337 aa14.63□□□□□ -0.07
CDX2-201ENST00000381020 FER1L4A9Z1Z3 1794 aa14.63□□□□□ -0.07
CDX2-201ENST00000381020 PDIA4P13667 645 aaKnown RBP14.62□□□□□ -0.07
CDX2-201ENST00000381020 TPD52L1Q16890 204 aaPredicted RBP14.62□□□□□ -0.07
CDX2-201ENST00000381020 ZSCAN30Q86W11 494 aa14.62□□□□□ -0.07
CDX2-201ENST00000381020 DZIP1Q86YF9 867 aaKnown RBP14.62□□□□□ -0.07
CDX2-201ENST00000381020 FSIP1Q8NA03 581 aa14.62□□□□□ -0.07
CDX2-201ENST00000381020 ZKSCAN3Q9BRR0 538 aa14.62□□□□□ -0.07
CDX2-201ENST00000381020 ZSWIM6Q9HCJ5 1215 aa14.62□□□□□ -0.07
CDX2-201ENST00000381020 UBR1Q8IWV7 1749 aa14.62□□□□□ -0.07
CDX2-201ENST00000381020 AK7Q96M32 723 aa14.62□□□□□ -0.07
CDX2-201ENST00000381020 MAP3K15Q6ZN16 1313 aa14.62□□□□□ -0.07
CDX2-201ENST00000381020 PCCAP05165 728 aaPredicted RBP14.62□□□□□ -0.07
CDX2-201ENST00000381020 SLC3A2P08195 630 aaKnown RBP14.62□□□□□ -0.07
CDX2-201ENST00000381020 CTSWP56202 376 aa14.62□□□□□ -0.07
CDX2-201ENST00000381020 ATP2B2Q01814 1243 aa14.62□□□□□ -0.07
CDX2-201ENST00000381020 H7C1W4 665 aa14.61□□□□□ -0.07
CDX2-201ENST00000381020 MBD4O95243 580 aa14.61□□□□□ -0.07
CDX2-201ENST00000381020 IARSP41252 1262 aaKnown RBP14.61□□□□□ -0.07
CDX2-201ENST00000381020 SLC26A6Q9BXS9 759 aa14.61□□□□□ -0.07
CDX2-201ENST00000381020 LOC102724428A0A0B4J2F2 783 aa14.61□□□□□ -0.07
CDX2-201ENST00000381020 BIN1O00499 593 aa14.61□□□□□ -0.07
CDX2-201ENST00000381020 CYP21A2P08686 494 aa14.61□□□□□ -0.07
CDX2-201ENST00000381020 SIK1P57059 783 aa14.61□□□□□ -0.07
CDX2-201ENST00000381020 FILIP1Q7Z7B0 1213 aa14.61□□□□□ -0.07
CDX2-201ENST00000381020 APPBP2Q92624 585 aa14.61□□□□□ -0.07
CDX2-201ENST00000381020 TM6SF1Q9BZW5 370 aa14.61□□□□□ -0.07
CDX2-201ENST00000381020 ATG3Q9NT62 314 aa14.61□□□□□ -0.07
CDX2-201ENST00000381020 RGS12O14924 1447 aa14.61□□□□□ -0.07
CDX2-201ENST00000381020 B4E1Z4 1266 aa14.61□□□□□ -0.07
CDX2-201ENST00000381020 SMC2O95347 1197 aa14.61□□□□□ -0.07
CDX2-201ENST00000381020 ISM2Q6H9L7 571 aa14.61□□□□□ -0.07
CDX2-201ENST00000381020 FAM13BQ9NYF5 915 aa14.61□□□□□ -0.07
CDX2-201ENST00000381020 HSPD1P10809 573 aaKnown RBP14.61□□□□□ -0.07
CDX2-201ENST00000381020 USP5P45974 858 aa14.6□□□□□ -0.07
CDX2-201ENST00000381020 JMYQ8N9B5 988 aa14.6□□□□□ -0.07
CDX2-201ENST00000381020 GPT2Q8TD30 523 aa14.6□□□□□ -0.07
CDX2-201ENST00000381020 ZNF830Q96NB3 372 aaPredicted RBP14.6□□□□□ -0.07
CDX2-201ENST00000381020 NAT10Q9H0A0 1025 aaKnown RBP14.6□□□□□ -0.07
CDX2-201ENST00000381020 ARMT1Q9H993 441 aa14.6□□□□□ -0.07
CDX2-201ENST00000381020 BRMS1Q9HCU9 246 aa14.6□□□□□ -0.07
CDX2-201ENST00000381020 PXDNQ92626 1479 aa14.6□□□□□ -0.07
CDX2-201ENST00000381020 PUM3Q15397 648 aaKnown RBP14.6□□□□□ -0.07
CDX2-201ENST00000381020 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.6□□□□□ -0.07
CDX2-201ENST00000381020 CCAR1Q8IX12 1150 aaKnown RBP14.6□□□□□ -0.07
CDX2-201ENST00000381020 KAZALD1Q96I82 304 aa14.6□□□□□ -0.07
CDX2-201ENST00000381020 E7EWF7 191 aa14.59□□□□□ -0.07
CDX2-201ENST00000381020 ZBTB43O43298 467 aa14.59□□□□□ -0.07
CDX2-201ENST00000381020 PHKA1P46020 1223 aa14.59□□□□□ -0.07
CDX2-201ENST00000381020 NLRP10Q86W26 655 aa14.59□□□□□ -0.07
CDX2-201ENST00000381020 SEC31BQ9NQW1 1179 aa14.59□□□□□ -0.07
CDX2-201ENST00000381020 ZNF219Q9P2Y4 722 aaPredicted RBP14.59□□□□□ -0.07
CDX2-201ENST00000381020 C6orf229H3BNL8 230 aa14.59□□□□□ -0.07
CDX2-201ENST00000381020 ZNF532Q9HCE3 1301 aa14.59□□□□□ -0.07
CDX2-201ENST00000381020 ADCY5O95622 1261 aa14.59□□□□□ -0.07
CDX2-201ENST00000381020 CRKLP46109 303 aaKnown RBP14.59□□□□□ -0.07
CDX2-201ENST00000381020 CUL4AQ13619 759 aa14.59□□□□□ -0.07
CDX2-201ENST00000381020 NECTIN1Q15223 517 aa14.59□□□□□ -0.07
CDX2-201ENST00000381020 RTCBQ9Y3I0 505 aaKnown RBP14.59□□□□□ -0.07
CDX2-201ENST00000381020 MYL10Q9BUA6 226 aa14.58□□□□□ -0.07
CDX2-201ENST00000381020 EPB41L2O43491 1005 aaKnown RBP14.58□□□□□ -0.08
CDX2-201ENST00000381020 MARCKSP29966 332 aaPredicted RBP14.58□□□□□ -0.08
CDX2-201ENST00000381020 IQCA1Q86XH1 822 aa14.58□□□□□ -0.08
CDX2-201ENST00000381020 RPGRQ92834 1020 aaKnown RBP14.58□□□□□ -0.08
CDX2-201ENST00000381020 ALG1Q9BT22 464 aa14.58□□□□□ -0.08
CDX2-201ENST00000381020 TRIM34Q9BYJ4 488 aa14.58□□□□□ -0.08
CDX2-201ENST00000381020 ZSCAN16Q9H4T2 348 aaPredicted RBP14.58□□□□□ -0.08
CDX2-201ENST00000381020 MKNK2Q9HBH9 465 aa14.58□□□□□ -0.08
CDX2-201ENST00000381020 HOOK1Q9UJC3 728 aaKnown RBP14.58□□□□□ -0.08
CDX2-201ENST00000381020 NSFL1CQ9UNZ2 370 aaKnown RBP14.58□□□□□ -0.08
CDX2-201ENST00000381020 ZNF165P49910 485 aa14.57□□□□□ -0.08
CDX2-201ENST00000381020 CCDC102BQ68D86 513 aa14.57□□□□□ -0.08
CDX2-201ENST00000381020 NAA16Q6N069 864 aaPredicted RBP14.57□□□□□ -0.08
CDX2-201ENST00000381020 TPTE2Q6XPS3 522 aa14.57□□□□□ -0.08
CDX2-201ENST00000381020 LPIN2Q92539 896 aa14.57□□□□□ -0.08
CDX2-201ENST00000381020 CDCA7Q9BWT1 371 aaPredicted RBP14.57□□□□□ -0.08
CDX2-201ENST00000381020 MTMR6Q9Y217 621 aa14.57□□□□□ -0.08
CDX2-201ENST00000381020 FGAP02671 866 aa14.57□□□□□ -0.08
CDX2-201ENST00000381020 OLFM4Q6UX06 510 aa14.57□□□□□ -0.08
CDX2-201ENST00000381020 CCNL1Q9UK58 526 aaPredicted RBP14.57□□□□□ -0.08
CDX2-201ENST00000381020 BCAMP50895 628 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms